RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 TRAV8-2A0A0B4J237 113 aa8.28□□□□□ -1.08
TMEM260-208ENST00000555905 IZUMO1RA6ND01 250 aa8.28□□□□□ -1.08
TMEM260-208ENST00000555905 GGTLC3B5MD39 225 aa8.28□□□□□ -1.08
TMEM260-208ENST00000555905 F6UZH7 168 aa8.28□□□□□ -1.08
TMEM260-208ENST00000555905 K7EQG2 157 aa8.28□□□□□ -1.08
TMEM260-208ENST00000555905 SOCS3O14543 225 aa8.28□□□□□ -1.08
TMEM260-208ENST00000555905 PDE6DO43924 150 aa8.28□□□□□ -1.08
TMEM260-208ENST00000555905 IGLL1P15814 213 aa8.28□□□□□ -1.08
TMEM260-208ENST00000555905 ATP5G3P48201 142 aa8.28□□□□□ -1.08
TMEM260-208ENST00000555905 SAMD5Q5TGI4 173 aa8.28□□□□□ -1.08
TMEM260-208ENST00000555905 IGFL4Q6B9Z1 124 aa8.28□□□□□ -1.08
TMEM260-208ENST00000555905 RNF182Q8N6D2 247 aa8.28□□□□□ -1.08
TMEM260-208ENST00000555905 C5orf17Q8NAS9 161 aa8.28□□□□□ -1.08
TMEM260-208ENST00000555905 MRPL53Q96EL3 112 aaKnown RBP8.28□□□□□ -1.08
TMEM260-208ENST00000555905 LINC00052Q96N35 136 aa8.28□□□□□ -1.08
TMEM260-208ENST00000555905 TREM1Q9NP99 234 aa8.28□□□□□ -1.08
TMEM260-208ENST00000555905 CD81P60033 236 aa8.27□□□□□ -1.09
TMEM260-208ENST00000555905 TNP2Q05952 138 aa8.27□□□□□ -1.09
TMEM260-208ENST00000555905 PSG3Q16557 428 aa8.27□□□□□ -1.09
TMEM260-208ENST00000555905 UQCC3Q6UW78 93 aa8.27□□□□□ -1.09
TMEM260-208ENST00000555905 CCDC28AQ8IWP9 274 aa8.27□□□□□ -1.09
TMEM260-208ENST00000555905 ZNF738Q8NE65 137 aa8.27□□□□□ -1.09
TMEM260-208ENST00000555905 EPDR1Q9UM22 224 aa8.27□□□□□ -1.09
TMEM260-208ENST00000555905 K7EQM0 130 aa8.26□□□□□ -1.09
TMEM260-208ENST00000555905 NDUFS6O75380 124 aaKnown RBP8.26□□□□□ -1.09
TMEM260-208ENST00000555905 ZNF688P0C7X2 276 aa8.26□□□□□ -1.09
TMEM260-208ENST00000555905 HLA-DMBP28068 263 aa8.26□□□□□ -1.09
TMEM260-208ENST00000555905 CMC4P56277 68 aaPredicted RBP8.26□□□□□ -1.09
TMEM260-208ENST00000555905 PSMG4Q5JS54 123 aa8.26□□□□□ -1.09
TMEM260-208ENST00000555905 EIF4E3Q8N5X7 224 aaKnown RBP8.26□□□□□ -1.09
TMEM260-208ENST00000555905 ARL6IP6Q8N6S5 226 aa8.26□□□□□ -1.09
TMEM260-208ENST00000555905 HIST1H2BAQ96A08 127 aa8.26□□□□□ -1.09
TMEM260-208ENST00000555905 C20orf173Q96LM9 149 aa8.26□□□□□ -1.09
TMEM260-208ENST00000555905 ATG101Q9BSB4 218 aa8.26□□□□□ -1.09
TMEM260-208ENST00000555905 RPH3ALQ9UNE2 315 aa8.26□□□□□ -1.09
TMEM260-208ENST00000555905 ANK2Q01484 3957 aa8.25□□□□□ -1.09
TMEM260-208ENST00000555905 SERTM2A0A1B0GWG4 89 aa8.25□□□□□ -1.09
TMEM260-208ENST00000555905 SCO2A0A1W2PP80 73 aa8.25□□□□□ -1.09
TMEM260-208ENST00000555905 ZNF705FA8MVS1 300 aaPredicted RBP8.25□□□□□ -1.09
TMEM260-208ENST00000555905 TMEM250H0YL14 139 aa8.25□□□□□ -1.09
TMEM260-208ENST00000555905 M0R3E3 92 aa8.25□□□□□ -1.09
TMEM260-208ENST00000555905 PEX7O00628 323 aa8.25□□□□□ -1.09
TMEM260-208ENST00000555905 TCRAP04437 139 aa8.25□□□□□ -1.09
TMEM260-208ENST00000555905 CEBPGP53567 150 aa8.25□□□□□ -1.09
TMEM260-208ENST00000555905 GNG5P63218 68 aa8.25□□□□□ -1.09
TMEM260-208ENST00000555905 SRSF3P84103 164 aaKnown RBP8.25□□□□□ -1.09
TMEM260-208ENST00000555905 FAM24BQ8N5W8 94 aa8.25□□□□□ -1.09
TMEM260-208ENST00000555905 CYB561D1Q8N8Q1 229 aa8.25□□□□□ -1.09
TMEM260-208ENST00000555905 RPUSD4Q96CM3 377 aaKnown RBP8.25□□□□□ -1.09
TMEM260-208ENST00000555905 SLC35B3Q9H1N7 401 aa8.25□□□□□ -1.09
TMEM260-208ENST00000555905 ZNF256Q9Y2P7 627 aaPredicted RBP8.25□□□□□ -1.09
TMEM260-208ENST00000555905 DIRC3C9JPN6 131 aa8.24□□□□□ -1.09
TMEM260-208ENST00000555905 SRP19P09132 144 aaKnown RBP8.24□□□□□ -1.09
TMEM260-208ENST00000555905 AKR1C3P42330 323 aa8.24□□□□□ -1.09
TMEM260-208ENST00000555905 CNN1P51911 297 aaKnown RBP8.24□□□□□ -1.09
TMEM260-208ENST00000555905 BEAN1Q3B7T3 259 aa8.24□□□□□ -1.09
TMEM260-208ENST00000555905 GOLT1AQ6ZVE7 132 aa8.24□□□□□ -1.09
TMEM260-208ENST00000555905 SLC7A5P1Q8MH63 180 aa8.24□□□□□ -1.09
TMEM260-208ENST00000555905 C11orf52Q96A22 123 aa8.24□□□□□ -1.09
TMEM260-208ENST00000555905 ZMAT5Q9UDW3 170 aaKnown RBP8.24□□□□□ -1.09
TMEM260-208ENST00000555905 IGKV2-40A0A087WW87 121 aaPredicted RBP8.23□□□□□ -1.09
TMEM260-208ENST00000555905 OR11H12B2RN74 326 aa8.23□□□□□ -1.09
TMEM260-208ENST00000555905 C9JQL5 133 aa8.23□□□□□ -1.09
TMEM260-208ENST00000555905 IGKV2D-40P01614 121 aaPredicted RBP8.23□□□□□ -1.09
TMEM260-208ENST00000555905 S100A9P06702 114 aaKnown RBP8.23□□□□□ -1.09
TMEM260-208ENST00000555905 DEFB131AP59861 70 aa8.23□□□□□ -1.09
TMEM260-208ENST00000555905 EBLN2Q6P2I7 272 aa8.23□□□□□ -1.09
TMEM260-208ENST00000555905 GTSCR1Q86UQ5 136 aa8.23□□□□□ -1.09
TMEM260-208ENST00000555905 OR10J6PQ8NGY7 276 aa8.23□□□□□ -1.09
TMEM260-208ENST00000555905 CITED4Q96RK1 184 aa8.23□□□□□ -1.09
TMEM260-208ENST00000555905 MAP6D1Q9H9H5 199 aa8.23□□□□□ -1.09
TMEM260-208ENST00000555905 RBAKDNA6NC62 111 aa8.22□□□□□ -1.09
TMEM260-208ENST00000555905 FBLL1A6NHQ2 334 aaKnown RBP8.22□□□□□ -1.09
TMEM260-208ENST00000555905 PRAC2D3DTV9 90 aa8.22□□□□□ -1.09
TMEM260-208ENST00000555905 SFTA3P0C7M3 94 aa8.22□□□□□ -1.09
TMEM260-208ENST00000555905 UBE2G1P62253 170 aa8.22□□□□□ -1.09
TMEM260-208ENST00000555905 ZNF674Q2M3X9 581 aa8.22□□□□□ -1.09
TMEM260-208ENST00000555905 SOHLH1Q5JUK2 328 aa8.22□□□□□ -1.09
TMEM260-208ENST00000555905 FOXI2Q6ZQN5 318 aa8.22□□□□□ -1.09
TMEM260-208ENST00000555905 OR8A1Q8NGG7 326 aa8.22□□□□□ -1.09
TMEM260-208ENST00000555905 C2CD4CQ8TF44 421 aa8.22□□□□□ -1.09
TMEM260-208ENST00000555905 FMC1Q96HJ9 113 aa8.22□□□□□ -1.09
TMEM260-208ENST00000555905 FAM110AQ9BQ89 295 aa8.22□□□□□ -1.09
TMEM260-208ENST00000555905 TRRAPQ9Y4A5 3859 aa8.22□□□□□ -1.09
TMEM260-208ENST00000555905 TRAV34A0A0B4J273 112 aa8.21□□□□□ -1.1
TMEM260-208ENST00000555905 DUSP14O95147 198 aaKnown RBP8.21□□□□□ -1.1
TMEM260-208ENST00000555905 PRB4P10163 310 aaPredicted RBP8.21□□□□□ -1.1
TMEM260-208ENST00000555905 RPL35P42766 123 aaKnown RBP8.21□□□□□ -1.1
TMEM260-208ENST00000555905 HIST1H1AQ02539 215 aaPredicted RBP8.21□□□□□ -1.1
TMEM260-208ENST00000555905 TMEM183BQ1AE95 376 aa8.21□□□□□ -1.1
TMEM260-208ENST00000555905 ODF3L2Q3SX64 289 aa8.21□□□□□ -1.1
TMEM260-208ENST00000555905 FAM74A3Q4VXF1 159 aa8.21□□□□□ -1.1
TMEM260-208ENST00000555905 TMEM78Q5T7P6 136 aa8.21□□□□□ -1.1
TMEM260-208ENST00000555905 C9orf47Q6ZRZ4 202 aa8.21□□□□□ -1.1
TMEM260-208ENST00000555905 TMEM75Q8N9X5 138 aa8.21□□□□□ -1.1
TMEM260-208ENST00000555905 LINC00479Q96M42 142 aa8.21□□□□□ -1.1
TMEM260-208ENST00000555905 VGLL1Q99990 258 aa8.21□□□□□ -1.1
TMEM260-208ENST00000555905 SMIM7Q9BQ49 75 aa8.21□□□□□ -1.1
TMEM260-208ENST00000555905 PARLQ9H300 379 aa8.21□□□□□ -1.1
TMEM260-208ENST00000555905 SAV1Q9H4B6 383 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms