RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 UBE2G1P62253 170 aa8.43□□□□□ -1.06
SHMT2-220ENST00000555634 SUMO1P63165 101 aaKnown RBP8.43□□□□□ -1.06
SHMT2-220ENST00000555634 PSMG4Q5JS54 123 aa8.43□□□□□ -1.06
SHMT2-220ENST00000555634 ADAMTSL5Q6ZMM2 481 aa8.43□□□□□ -1.06
SHMT2-220ENST00000555634 EXOC3-AS1Q8N2X6 119 aa8.43□□□□□ -1.06
SHMT2-220ENST00000555634 CYB561D1Q8N8Q1 229 aa8.43□□□□□ -1.06
SHMT2-220ENST00000555634 DCANP1Q8TF63 244 aa8.43□□□□□ -1.06
SHMT2-220ENST00000555634 NDFIP1Q9BT67 221 aa8.43□□□□□ -1.06
SHMT2-220ENST00000555634 PPP1R14DQ9NXH3 145 aa8.43□□□□□ -1.06
SHMT2-220ENST00000555634 YTHDF2Q9Y5A9 579 aaKnown RBP8.43□□□□□ -1.06
SHMT2-220ENST00000555634 SELENOKQ9Y6D0 94 aa8.43□□□□□ -1.06
SHMT2-220ENST00000555634 SMAD5-AS1Q9Y6J3 95 aa8.43□□□□□ -1.06
SHMT2-220ENST00000555634 GGTLC3B5MD39 225 aa8.42□□□□□ -1.06
SHMT2-220ENST00000555634 TMEM250H0YL14 139 aa8.42□□□□□ -1.06
SHMT2-220ENST00000555634 PEX7O00628 323 aa8.42□□□□□ -1.06
SHMT2-220ENST00000555634 NDUFS6O75380 124 aaKnown RBP8.42□□□□□ -1.06
SHMT2-220ENST00000555634 S100A9P06702 114 aaKnown RBP8.42□□□□□ -1.06
SHMT2-220ENST00000555634 ATP5G3P48201 142 aa8.42□□□□□ -1.06
SHMT2-220ENST00000555634 CEBPGP53567 150 aa8.42□□□□□ -1.06
SHMT2-220ENST00000555634 CD81P60033 236 aa8.42□□□□□ -1.06
SHMT2-220ENST00000555634 CCL20P78556 96 aa8.42□□□□□ -1.06
SHMT2-220ENST00000555634 PSG3Q16557 428 aa8.42□□□□□ -1.06
SHMT2-220ENST00000555634 TMEM78Q5T7P6 136 aa8.42□□□□□ -1.06
SHMT2-220ENST00000555634 RNF182Q8N6D2 247 aa8.42□□□□□ -1.06
SHMT2-220ENST00000555634 LINC00862A6NCI5 91 aa8.41□□□□□ -1.06
SHMT2-220ENST00000555634 SOCS3O14543 225 aa8.41□□□□□ -1.06
SHMT2-220ENST00000555634 DUSP14O95147 198 aaKnown RBP8.41□□□□□ -1.06
SHMT2-220ENST00000555634 NDUFB4O95168 129 aa8.41□□□□□ -1.06
SHMT2-220ENST00000555634 FMC1Q96HJ9 113 aa8.41□□□□□ -1.06
SHMT2-220ENST00000555634 C17orf77Q96MU5 243 aa8.41□□□□□ -1.06
SHMT2-220ENST00000555634 FAM110AQ9BQ89 295 aa8.41□□□□□ -1.06
SHMT2-220ENST00000555634 ZNF256Q9Y2P7 627 aaPredicted RBP8.41□□□□□ -1.06
SHMT2-220ENST00000555634 RBAKDNA6NC62 111 aa8.4□□□□□ -1.06
SHMT2-220ENST00000555634 WIPF1O43516 503 aa8.4□□□□□ -1.06
SHMT2-220ENST00000555634 TCRAP04437 139 aa8.4□□□□□ -1.06
SHMT2-220ENST00000555634 FOXI2Q6ZQN5 318 aa8.4□□□□□ -1.06
SHMT2-220ENST00000555634 GOLT1AQ6ZVE7 132 aa8.4□□□□□ -1.06
SHMT2-220ENST00000555634 MAP6D1Q9H9H5 199 aa8.4□□□□□ -1.06
SHMT2-220ENST00000555634 EPDR1Q9UM22 224 aa8.4□□□□□ -1.06
SHMT2-220ENST00000555634 SCO2A0A1W2PP80 73 aa8.39□□□□□ -1.07
SHMT2-220ENST00000555634 IZUMO1RA6ND01 250 aa8.39□□□□□ -1.07
SHMT2-220ENST00000555634 DIRC3C9JPN6 131 aa8.39□□□□□ -1.07
SHMT2-220ENST00000555634 DEFB131AP59861 70 aa8.39□□□□□ -1.07
SHMT2-220ENST00000555634 HIST1H1AQ02539 215 aaPredicted RBP8.39□□□□□ -1.07
SHMT2-220ENST00000555634 STHQ8IWL8 128 aa8.39□□□□□ -1.07
SHMT2-220ENST00000555634 TMEM75Q8N9X5 138 aa8.39□□□□□ -1.07
SHMT2-220ENST00000555634 C11orf52Q96A22 123 aa8.39□□□□□ -1.07
SHMT2-220ENST00000555634 RARRES2Q99969 163 aa8.39□□□□□ -1.07
SHMT2-220ENST00000555634 SLC35B3Q9H1N7 401 aa8.39□□□□□ -1.07
SHMT2-220ENST00000555634 TRAV8-2A0A0B4J237 113 aa8.38□□□□□ -1.07
SHMT2-220ENST00000555634 M0R3E3 92 aa8.38□□□□□ -1.07
SHMT2-220ENST00000555634 CT45A10P0DMU9 189 aa8.38□□□□□ -1.07
SHMT2-220ENST00000555634 GNG4P50150 75 aa8.38□□□□□ -1.07
SHMT2-220ENST00000555634 NUTF2P61970 127 aaKnown RBP8.38□□□□□ -1.07
SHMT2-220ENST00000555634 GNG5P63218 68 aa8.38□□□□□ -1.07
SHMT2-220ENST00000555634 ZNF674Q2M3X9 581 aa8.38□□□□□ -1.07
SHMT2-220ENST00000555634 FAM74A3Q4VXF1 159 aa8.38□□□□□ -1.07
SHMT2-220ENST00000555634 SOHLH1Q5JUK2 328 aa8.38□□□□□ -1.07
SHMT2-220ENST00000555634 IGFL4Q6B9Z1 124 aa8.38□□□□□ -1.07
SHMT2-220ENST00000555634 EIF4E3Q8N5X7 224 aaKnown RBP8.38□□□□□ -1.07
SHMT2-220ENST00000555634 SMIM7Q9BQ49 75 aa8.38□□□□□ -1.07
SHMT2-220ENST00000555634 BIN3Q9NQY0 253 aa8.38□□□□□ -1.07
SHMT2-220ENST00000555634 IGKV2-40A0A087WW87 121 aaPredicted RBP8.37□□□□□ -1.07
SHMT2-220ENST00000555634 IGKV2D-40P01614 121 aaPredicted RBP8.37□□□□□ -1.07
SHMT2-220ENST00000555634 SFTA3P0C7M3 94 aa8.37□□□□□ -1.07
SHMT2-220ENST00000555634 TSPOP30536 169 aa8.37□□□□□ -1.07
SHMT2-220ENST00000555634 BEAN1Q3B7T3 259 aa8.37□□□□□ -1.07
SHMT2-220ENST00000555634 ACTL10Q5JWF8 245 aa8.37□□□□□ -1.07
SHMT2-220ENST00000555634 SAPCD1Q5SSQ6 148 aa8.37□□□□□ -1.07
SHMT2-220ENST00000555634 CCDC28AQ8IWP9 274 aa8.37□□□□□ -1.07
SHMT2-220ENST00000555634 OR4B1Q8NGF8 309 aa8.37□□□□□ -1.07
SHMT2-220ENST00000555634 OR8A1Q8NGG7 326 aa8.37□□□□□ -1.07
SHMT2-220ENST00000555634 CITED4Q96RK1 184 aa8.37□□□□□ -1.07
SHMT2-220ENST00000555634 NIPSNAP3BQ9BS92 247 aa8.37□□□□□ -1.07
SHMT2-220ENST00000555634 SAV1Q9H4B6 383 aaPredicted RBP8.37□□□□□ -1.07
SHMT2-220ENST00000555634 SORL1Q92673 2214 aa8.37□□□□□ -1.07
SHMT2-220ENST00000555634 ZNF727A8MUV8 499 aa8.36□□□□□ -1.07
SHMT2-220ENST00000555634 ZNF705FA8MVS1 300 aaPredicted RBP8.36□□□□□ -1.07
SHMT2-220ENST00000555634 HLA-DRB4P13762 266 aa8.36□□□□□ -1.07
SHMT2-220ENST00000555634 HLA-DMBP28068 263 aa8.36□□□□□ -1.07
SHMT2-220ENST00000555634 LEPP41159 167 aa8.36□□□□□ -1.07
SHMT2-220ENST00000555634 RPL35P42766 123 aaKnown RBP8.36□□□□□ -1.07
SHMT2-220ENST00000555634 FLI1Q01543 452 aaPredicted RBP8.36□□□□□ -1.07
SHMT2-220ENST00000555634 TMEM183BQ1AE95 376 aa8.36□□□□□ -1.07
SHMT2-220ENST00000555634 OXLD1Q5BKU9 147 aa8.36□□□□□ -1.07
SHMT2-220ENST00000555634 Q86TA4 180 aa8.36□□□□□ -1.07
SHMT2-220ENST00000555634 FAM24BQ8N5W8 94 aa8.36□□□□□ -1.07
SHMT2-220ENST00000555634 SMIM12Q96EX1 92 aa8.36□□□□□ -1.07
SHMT2-220ENST00000555634 C20orf173Q96LM9 149 aa8.36□□□□□ -1.07
SHMT2-220ENST00000555634 LINC00477Q96M19 166 aa8.36□□□□□ -1.07
SHMT2-220ENST00000555634 PARLQ9H300 379 aa8.36□□□□□ -1.07
SHMT2-220ENST00000555634 LENEPQ9Y5L5 61 aa8.36□□□□□ -1.07
SHMT2-220ENST00000555634 HLA-DRB4X5D2U9 266 aa8.36□□□□□ -1.07
SHMT2-220ENST00000555634 A0A0J9YX75 114 aa8.35□□□□□ -1.07
SHMT2-220ENST00000555634 KRBOX1C9JBD0 128 aa8.35□□□□□ -1.07
SHMT2-220ENST00000555634 NPIPB6E9PJ23 425 aa8.35□□□□□ -1.07
SHMT2-220ENST00000555634 F8W036 122 aa8.35□□□□□ -1.07
SHMT2-220ENST00000555634 AMBPP02760 352 aa8.35□□□□□ -1.07
SHMT2-220ENST00000555634 SRP19P09132 144 aaKnown RBP8.35□□□□□ -1.07
SHMT2-220ENST00000555634 ZNF138P52744 262 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms