RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 CMC4P56277 68 aaPredicted RBP10.8□□□□□ -0.68
SHOX2-206ENST00000554685 PSG3Q16557 428 aa10.8□□□□□ -0.68
SHOX2-206ENST00000554685 WFDC3Q8IUB2 231 aa10.8□□□□□ -0.68
SHOX2-206ENST00000554685 CITED4Q96RK1 184 aa10.8□□□□□ -0.68
SHOX2-206ENST00000554685 ATG101Q9BSB4 218 aa10.8□□□□□ -0.68
SHOX2-206ENST00000554685 TRAV8-2A0A0B4J237 113 aa10.79□□□□□ -0.68
SHOX2-206ENST00000554685 FBLL1A6NHQ2 334 aaKnown RBP10.79□□□□□ -0.68
SHOX2-206ENST00000554685 PEX7O00628 323 aa10.79□□□□□ -0.68
SHOX2-206ENST00000554685 S100A9P06702 114 aaKnown RBP10.79□□□□□ -0.68
SHOX2-206ENST00000554685 AKR1C3P42330 323 aa10.79□□□□□ -0.68
SHOX2-206ENST00000554685 CNN1P51911 297 aaKnown RBP10.79□□□□□ -0.68
SHOX2-206ENST00000554685 SRSF3P84103 164 aaKnown RBP10.79□□□□□ -0.68
SHOX2-206ENST00000554685 GUCA2BQ16661 112 aa10.79□□□□□ -0.68
SHOX2-206ENST00000554685 SLC7A5P1Q8MH63 180 aa10.79□□□□□ -0.68
SHOX2-206ENST00000554685 CYB561D1Q8N8Q1 229 aa10.79□□□□□ -0.68
SHOX2-206ENST00000554685 ZNF738Q8NE65 137 aa10.79□□□□□ -0.68
SHOX2-206ENST00000554685 MDFIQ99750 246 aa10.79□□□□□ -0.68
SHOX2-206ENST00000554685 SELENOKQ9Y6D0 94 aa10.79□□□□□ -0.68
SHOX2-206ENST00000554685 SCO2A0A1W2PP80 73 aa10.78□□□□□ -0.68
SHOX2-206ENST00000554685 TCRAP04437 139 aa10.78□□□□□ -0.68
SHOX2-206ENST00000554685 PRR31Q5SQ13 230 aa10.78□□□□□ -0.68
SHOX2-206ENST00000554685 LINC00052Q96N35 136 aa10.78□□□□□ -0.68
SHOX2-206ENST00000554685 RPH3ALQ9UNE2 315 aa10.78□□□□□ -0.68
SHOX2-206ENST00000554685 TENM1Q9UKZ4 2725 aa10.77□□□□□ -0.69
SHOX2-206ENST00000554685 TMEM218A2RU14 115 aa10.77□□□□□ -0.69
SHOX2-206ENST00000554685 RBAKDNA6NC62 111 aa10.77□□□□□ -0.69
SHOX2-206ENST00000554685 DIRC3C9JPN6 131 aa10.77□□□□□ -0.69
SHOX2-206ENST00000554685 M0R3E3 92 aa10.77□□□□□ -0.69
SHOX2-206ENST00000554685 SFTA3P0C7M3 94 aa10.77□□□□□ -0.69
SHOX2-206ENST00000554685 CEBPGP53567 150 aa10.77□□□□□ -0.69
SHOX2-206ENST00000554685 KRTAP21-3Q3LHN1 58 aa10.77□□□□□ -0.69
SHOX2-206ENST00000554685 FAM74A3Q4VXF1 159 aa10.77□□□□□ -0.69
SHOX2-206ENST00000554685 SOHLH1Q5JUK2 328 aa10.77□□□□□ -0.69
SHOX2-206ENST00000554685 IGFL4Q6B9Z1 124 aa10.77□□□□□ -0.69
SHOX2-206ENST00000554685 RNF182Q8N6D2 247 aa10.77□□□□□ -0.69
SHOX2-206ENST00000554685 C9JQL5 133 aa10.76□□□□□ -0.69
SHOX2-206ENST00000554685 WIPF1O43516 503 aa10.76□□□□□ -0.69
SHOX2-206ENST00000554685 ZNF688P0C7X2 276 aa10.76□□□□□ -0.69
SHOX2-206ENST00000554685 HLA-DMBP28068 263 aa10.76□□□□□ -0.69
SHOX2-206ENST00000554685 UBE2G1P62253 170 aa10.76□□□□□ -0.69
SHOX2-206ENST00000554685 GNG5P63218 68 aa10.76□□□□□ -0.69
SHOX2-206ENST00000554685 PSMG4Q5JS54 123 aa10.76□□□□□ -0.69
SHOX2-206ENST00000554685 GOLT1AQ6ZVE7 132 aa10.76□□□□□ -0.69
SHOX2-206ENST00000554685 C2CD4CQ8TF44 421 aa10.76□□□□□ -0.69
SHOX2-206ENST00000554685 FMC1Q96HJ9 113 aa10.76□□□□□ -0.69
SHOX2-206ENST00000554685 PARLQ9H300 379 aa10.76□□□□□ -0.69
SHOX2-206ENST00000554685 ZMAT5Q9UDW3 170 aaKnown RBP10.76□□□□□ -0.69
SHOX2-206ENST00000554685 IZUMO1RA6ND01 250 aa10.75□□□□□ -0.69
SHOX2-206ENST00000554685 KRBOX1C9JBD0 128 aa10.75□□□□□ -0.69
SHOX2-206ENST00000554685 TAS2R60P59551 318 aa10.75□□□□□ -0.69
SHOX2-206ENST00000554685 TMEM75Q8N9X5 138 aa10.75□□□□□ -0.69
SHOX2-206ENST00000554685 OR10J6PQ8NGY7 276 aa10.75□□□□□ -0.69
SHOX2-206ENST00000554685 C20orf173Q96LM9 149 aa10.75□□□□□ -0.69
SHOX2-206ENST00000554685 SMIM7Q9BQ49 75 aa10.75□□□□□ -0.69
SHOX2-206ENST00000554685 FAM110AQ9BQ89 295 aa10.75□□□□□ -0.69
SHOX2-206ENST00000554685 ZNF256Q9Y2P7 627 aaPredicted RBP10.75□□□□□ -0.69
SHOX2-206ENST00000554685 TRBV6-1A0A0K0K1D8 114 aa10.74□□□□□ -0.69
SHOX2-206ENST00000554685 ZNF727A8MUV8 499 aa10.74□□□□□ -0.69
SHOX2-206ENST00000554685 ZNF705FA8MVS1 300 aaPredicted RBP10.74□□□□□ -0.69
SHOX2-206ENST00000554685 F8W036 122 aa10.74□□□□□ -0.69
SHOX2-206ENST00000554685 IGLL1P15814 213 aa10.74□□□□□ -0.69
SHOX2-206ENST00000554685 RPL35P42766 123 aaKnown RBP10.74□□□□□ -0.69
SHOX2-206ENST00000554685 TMEM183BQ1AE95 376 aa10.74□□□□□ -0.69
SHOX2-206ENST00000554685 ZNF674Q2M3X9 581 aa10.74□□□□□ -0.69
SHOX2-206ENST00000554685 BEAN1Q3B7T3 259 aa10.74□□□□□ -0.69
SHOX2-206ENST00000554685 EBLN2Q6P2I7 272 aa10.74□□□□□ -0.69
SHOX2-206ENST00000554685 SEC11CQ9BY50 192 aa10.74□□□□□ -0.69
SHOX2-206ENST00000554685 KLF12Q9Y4X4 402 aa10.74□□□□□ -0.69
SHOX2-206ENST00000554685 WNK1Q9H4A3 2382 aa10.73□□□□□ -0.69
SHOX2-206ENST00000554685 DUSP14O95147 198 aaKnown RBP10.73□□□□□ -0.69
SHOX2-206ENST00000554685 DEFB131AP59861 70 aa10.73□□□□□ -0.69
SHOX2-206ENST00000554685 C4orf48Q5BLP8 95 aa10.73□□□□□ -0.69
SHOX2-206ENST00000554685 TMEM78Q5T7P6 136 aa10.73□□□□□ -0.69
SHOX2-206ENST00000554685 FOXI2Q6ZQN5 318 aa10.73□□□□□ -0.69
SHOX2-206ENST00000554685 FAM24BQ8N5W8 94 aa10.73□□□□□ -0.69
SHOX2-206ENST00000554685 OR8A1Q8NGG7 326 aa10.73□□□□□ -0.69
SHOX2-206ENST00000554685 SPATA3Q8NHX4 192 aa10.73□□□□□ -0.69
SHOX2-206ENST00000554685 MAP6D1Q9H9H5 199 aa10.73□□□□□ -0.69
SHOX2-206ENST00000554685 IGKV2-40A0A087WW87 121 aaPredicted RBP10.72□□□□□ -0.69
SHOX2-206ENST00000554685 OR11H12B2RN74 326 aa10.72□□□□□ -0.69
SHOX2-206ENST00000554685 C9JCJ5 164 aa10.72□□□□□ -0.69
SHOX2-206ENST00000554685 IGKV2D-40P01614 121 aaPredicted RBP10.72□□□□□ -0.69
SHOX2-206ENST00000554685 GNG4P50150 75 aa10.72□□□□□ -0.69
SHOX2-206ENST00000554685 FLI1Q01543 452 aaPredicted RBP10.72□□□□□ -0.69
SHOX2-206ENST00000554685 C9orf47Q6ZRZ4 202 aa10.72□□□□□ -0.69
SHOX2-206ENST00000554685 GTSCR1Q86UQ5 136 aa10.72□□□□□ -0.69
SHOX2-206ENST00000554685 SMIM12Q96EX1 92 aa10.72□□□□□ -0.69
SHOX2-206ENST00000554685 LINC00477Q96M19 166 aa10.72□□□□□ -0.69
SHOX2-206ENST00000554685 NIPSNAP3BQ9BS92 247 aa10.72□□□□□ -0.69
SHOX2-206ENST00000554685 NDFIP1Q9BT67 221 aa10.72□□□□□ -0.69
SHOX2-206ENST00000554685 ZFP30Q9Y2G7 519 aa10.72□□□□□ -0.69
SHOX2-206ENST00000554685 COL6A5A8TX70 2615 aa10.71□□□□□ -0.69
SHOX2-206ENST00000554685 PRAC2D3DTV9 90 aa10.71□□□□□ -0.69
SHOX2-206ENST00000554685 NPIPB6E9PJ23 425 aa10.71□□□□□ -0.69
SHOX2-206ENST00000554685 HIST1H1AQ02539 215 aaPredicted RBP10.71□□□□□ -0.69
SHOX2-206ENST00000554685 SAPCD1Q5SSQ6 148 aa10.71□□□□□ -0.69
SHOX2-206ENST00000554685 Q86TA4 180 aa10.71□□□□□ -0.69
SHOX2-206ENST00000554685 DERL1Q9BUN8 251 aa10.71□□□□□ -0.69
SHOX2-206ENST00000554685 SAV1Q9H4B6 383 aaPredicted RBP10.71□□□□□ -0.69
SHOX2-206ENST00000554685 NAT8Q9UHE5 227 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms