RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 MGST2Q99735 147 aa8.41□□□□□ -1.06
SRP54-203ENST00000553544 ATP5SQ99766 215 aa8.41□□□□□ -1.06
SRP54-203ENST00000553544 HSPB11Q9Y547 144 aa8.41□□□□□ -1.06
SRP54-203ENST00000553544 CXCL2P19875 107 aa8.4□□□□□ -1.06
SRP54-203ENST00000553544 CXCL3P19876 107 aa8.4□□□□□ -1.06
SRP54-203ENST00000553544 CLINT1Q14677 625 aa8.4□□□□□ -1.06
SRP54-203ENST00000553544 FCN2Q15485 313 aa8.4□□□□□ -1.06
SRP54-203ENST00000553544 C10orf113Q5VZT2 155 aa8.4□□□□□ -1.06
SRP54-203ENST00000553544 LINC00305Q7Z4B0 112 aa8.4□□□□□ -1.06
SRP54-203ENST00000553544 BPIFA4PQ86YQ2 179 aa8.4□□□□□ -1.06
SRP54-203ENST00000553544 C1orf158Q8N1D5 194 aa8.4□□□□□ -1.06
SRP54-203ENST00000553544 INO80EQ8NBZ0 244 aaPredicted RBP8.4□□□□□ -1.06
SRP54-203ENST00000553544 SCGB1C1Q8TD33 95 aa8.4□□□□□ -1.06
SRP54-203ENST00000553544 NPCDR1Q9BY65 106 aa8.4□□□□□ -1.06
SRP54-203ENST00000553544 DNAJC4Q9NNZ3 241 aa8.4□□□□□ -1.06
SRP54-203ENST00000553544 H0YIZ8 118 aa8.39□□□□□ -1.07
SRP54-203ENST00000553544 CNN1P51911 297 aaKnown RBP8.39□□□□□ -1.07
SRP54-203ENST00000553544 NHLH2Q02577 135 aa8.39□□□□□ -1.07
SRP54-203ENST00000553544 LCN15Q6UWW0 184 aa8.39□□□□□ -1.07
SRP54-203ENST00000553544 Q8N1X5 172 aa8.39□□□□□ -1.07
SRP54-203ENST00000553544 RNF182Q8N6D2 247 aa8.39□□□□□ -1.07
SRP54-203ENST00000553544 OR11H7Q8NGC8 314 aa8.39□□□□□ -1.07
SRP54-203ENST00000553544 LRRC20Q8TCA0 184 aa8.39□□□□□ -1.07
SRP54-203ENST00000553544 SLC50A1Q9BRV3 221 aa8.39□□□□□ -1.07
SRP54-203ENST00000553544 SLC39A9Q9NUM3 307 aa8.39□□□□□ -1.07
SRP54-203ENST00000553544 PXMP4Q9Y6I8 212 aa8.39□□□□□ -1.07
SRP54-203ENST00000553544 TMEM189A5PLL7 270 aa8.38□□□□□ -1.07
SRP54-203ENST00000553544 CRXO43186 299 aaPredicted RBP8.38□□□□□ -1.07
SRP54-203ENST00000553544 DUSP14O95147 198 aaKnown RBP8.38□□□□□ -1.07
SRP54-203ENST00000553544 MORN5Q5VZ52 161 aa8.38□□□□□ -1.07
SRP54-203ENST00000553544 IGF2BP2-AS1Q96M15 143 aa8.38□□□□□ -1.07
SRP54-203ENST00000553544 PARD6GQ9BYG4 376 aaPredicted RBP8.38□□□□□ -1.07
SRP54-203ENST00000553544 WDR61Q9GZS3 305 aaKnown RBP8.38□□□□□ -1.07
SRP54-203ENST00000553544 RFNGQ9Y644 331 aa8.38□□□□□ -1.07
SRP54-203ENST00000553544 IGHV3OR16-12A0A075B7B8 117 aa8.37□□□□□ -1.07
SRP54-203ENST00000553544 EMP1P54849 157 aa8.37□□□□□ -1.07
SRP54-203ENST00000553544 PSG3Q16557 428 aa8.37□□□□□ -1.07
SRP54-203ENST00000553544 GUK1Q16774 197 aa8.37□□□□□ -1.07
SRP54-203ENST00000553544 MIC13Q5XKP0 118 aa8.37□□□□□ -1.07
SRP54-203ENST00000553544 ZNF738Q8NE65 137 aa8.37□□□□□ -1.07
SRP54-203ENST00000553544 OR2T35Q8NGX2 323 aa8.37□□□□□ -1.07
SRP54-203ENST00000553544 AQP10Q96PS8 301 aa8.37□□□□□ -1.07
SRP54-203ENST00000553544 MRPL32Q9BYC8 188 aaKnown RBP8.37□□□□□ -1.07
SRP54-203ENST00000553544 SCRT2Q9NQ03 307 aa8.37□□□□□ -1.07
SRP54-203ENST00000553544 ZNF331Q9NQX6 463 aaPredicted RBP8.37□□□□□ -1.07
SRP54-203ENST00000553544 GOLT1BQ9Y3E0 138 aa8.37□□□□□ -1.07
SRP54-203ENST00000553544 IGLC2P0DOY2 106 aa8.36□□□□□ -1.07
SRP54-203ENST00000553544 FAM3BP58499 235 aaPredicted RBP8.36□□□□□ -1.07
SRP54-203ENST00000553544 TNP2Q05952 138 aa8.36□□□□□ -1.07
SRP54-203ENST00000553544 SPINK13Q1W4C9 94 aa8.36□□□□□ -1.07
SRP54-203ENST00000553544 OR8A1Q8NGG7 326 aa8.36□□□□□ -1.07
SRP54-203ENST00000553544 DKK2Q9UBU2 259 aa8.36□□□□□ -1.07
SRP54-203ENST00000553544 TEX48A0A1B0GUV7 120 aa8.35□□□□□ -1.07
SRP54-203ENST00000553544 M0R2Z0 102 aa8.35□□□□□ -1.07
SRP54-203ENST00000553544 HBE1P02100 147 aa8.35□□□□□ -1.07
SRP54-203ENST00000553544 TAS2R45P59539 299 aa8.35□□□□□ -1.07
SRP54-203ENST00000553544 PDE6HQ13956 83 aa8.35□□□□□ -1.07
SRP54-203ENST00000553544 SAT2Q96F10 170 aaPredicted RBP8.35□□□□□ -1.07
SRP54-203ENST00000553544 NIPSNAP3BQ9BS92 247 aa8.35□□□□□ -1.07
SRP54-203ENST00000553544 TIMM9Q9Y5J7 89 aa8.35□□□□□ -1.07
SRP54-203ENST00000553544 HERC1Q15751 4861 aa8.35□□□□□ -1.07
SRP54-203ENST00000553544 FXYD6-FXYD2A0A087WZ82 144 aa8.34□□□□□ -1.07
SRP54-203ENST00000553544 BORCS7-ASMTA0A0B4J1R7 106 aa8.34□□□□□ -1.07
SRP54-203ENST00000553544 TRAV5A0A0B4J249 113 aa8.34□□□□□ -1.07
SRP54-203ENST00000553544 LOC102723971A0A1B0GUV8 181 aa8.34□□□□□ -1.07
SRP54-203ENST00000553544 H3BQ15 152 aa8.34□□□□□ -1.07
SRP54-203ENST00000553544 BOLA2-SMG1P6H3BVE0 249 aa8.34□□□□□ -1.07
SRP54-203ENST00000553544 SLC17A3O00476 420 aa8.34□□□□□ -1.07
SRP54-203ENST00000553544 ZNF253O75346 499 aa8.34□□□□□ -1.07
SRP54-203ENST00000553544 MBP02144 154 aa8.34□□□□□ -1.07
SRP54-203ENST00000553544 SNRPCP09234 159 aaKnown RBP8.34□□□□□ -1.07
SRP54-203ENST00000553544 HTN3P15516 51 aa8.34□□□□□ -1.07
SRP54-203ENST00000553544 RRN3P1Q2M238 152 aa8.34□□□□□ -1.07
SRP54-203ENST00000553544 FAM222AQ5U5X8 452 aa8.34□□□□□ -1.07
SRP54-203ENST00000553544 RPUSD4Q96CM3 377 aaKnown RBP8.34□□□□□ -1.07
SRP54-203ENST00000553544 SMIM3Q9BZL3 60 aa8.34□□□□□ -1.07
SRP54-203ENST00000553544 TMEM14CQ9P0S9 112 aa8.34□□□□□ -1.07
SRP54-203ENST00000553544 TAAR5O14804 337 aa8.33□□□□□ -1.08
SRP54-203ENST00000553544 INSP01308 110 aa8.33□□□□□ -1.08
SRP54-203ENST00000553544 PRM2P04554 102 aa8.33□□□□□ -1.08
SRP54-203ENST00000553544 RHOBP62745 196 aa8.33□□□□□ -1.08
SRP54-203ENST00000553544 HIST1H1AQ02539 215 aaPredicted RBP8.33□□□□□ -1.08
SRP54-203ENST00000553544 ACOT6Q3I5F7 207 aaPredicted RBP8.33□□□□□ -1.08
SRP54-203ENST00000553544 KHDC3LQ587J8 217 aa8.33□□□□□ -1.08
SRP54-203ENST00000553544 C6orf223Q8N319 242 aa8.33□□□□□ -1.08
SRP54-203ENST00000553544 ATG101Q9BSB4 218 aa8.33□□□□□ -1.08
SRP54-203ENST00000553544 YTHDF2Q9Y5A9 579 aaKnown RBP8.33□□□□□ -1.08
SRP54-203ENST00000553544 TRAV12-2A0A075B6T6 113 aa8.32□□□□□ -1.08
SRP54-203ENST00000553544 PRAC2D3DTV9 90 aa8.32□□□□□ -1.08
SRP54-203ENST00000553544 H3BTX0 84 aa8.32□□□□□ -1.08
SRP54-203ENST00000553544 PRB4P10163 310 aaPredicted RBP8.32□□□□□ -1.08
SRP54-203ENST00000553544 HIST1H1EP10412 219 aaKnown RBP8.32□□□□□ -1.08
SRP54-203ENST00000553544 TSPOP30536 169 aa8.32□□□□□ -1.08
SRP54-203ENST00000553544 FFAR4Q5NUL3 377 aa8.32□□□□□ -1.08
SRP54-203ENST00000553544 TMEM88Q6PEY1 159 aa8.32□□□□□ -1.08
SRP54-203ENST00000553544 BAP18Q8IXM2 172 aa8.32□□□□□ -1.08
SRP54-203ENST00000553544 GNPNAT1Q96EK6 184 aaPredicted RBP8.32□□□□□ -1.08
SRP54-203ENST00000553544 PSMG3Q9BT73 122 aaPredicted RBP8.32□□□□□ -1.08
SRP54-203ENST00000553544 TMEM208Q9BTX3 173 aa8.32□□□□□ -1.08
SRP54-203ENST00000553544 AAMDCQ9H7C9 122 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 222.5 ms