RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 GBGT1Q8N5D6 347 aa13.07□□□□□ -0.32
LETMD1-220ENST00000549686 CITED4Q96RK1 184 aa13.07□□□□□ -0.32
LETMD1-220ENST00000549686 PEX7O00628 323 aa13.06□□□□□ -0.32
LETMD1-220ENST00000549686 TCRAP04437 139 aa13.06□□□□□ -0.32
LETMD1-220ENST00000549686 S100A9P06702 114 aaKnown RBP13.06□□□□□ -0.32
LETMD1-220ENST00000549686 CMC4P56277 68 aaPredicted RBP13.06□□□□□ -0.32
LETMD1-220ENST00000549686 FAM74A3Q4VXF1 159 aa13.06□□□□□ -0.32
LETMD1-220ENST00000549686 CYB561D1Q8N8Q1 229 aa13.06□□□□□ -0.32
LETMD1-220ENST00000549686 SCO2A0A1W2PP80 73 aa13.05□□□□□ -0.32
LETMD1-220ENST00000549686 TMEM218A2RU14 115 aa13.05□□□□□ -0.32
LETMD1-220ENST00000549686 DIRC3C9JPN6 131 aa13.05□□□□□ -0.32
LETMD1-220ENST00000549686 C9JQL5 133 aa13.05□□□□□ -0.32
LETMD1-220ENST00000549686 SFTA3P0C7M3 94 aa13.05□□□□□ -0.32
LETMD1-220ENST00000549686 TFPI2P48307 235 aa13.05□□□□□ -0.32
LETMD1-220ENST00000549686 CNN1P51911 297 aaKnown RBP13.05□□□□□ -0.32
LETMD1-220ENST00000549686 SOHLH1Q5JUK2 328 aa13.05□□□□□ -0.32
LETMD1-220ENST00000549686 WFDC3Q8IUB2 231 aa13.05□□□□□ -0.32
LETMD1-220ENST00000549686 MDFIQ99750 246 aa13.05□□□□□ -0.32
LETMD1-220ENST00000549686 TENM1Q9UKZ4 2725 aa13.04□□□□□ -0.32
LETMD1-220ENST00000549686 RBAKDNA6NC62 111 aa13.04□□□□□ -0.32
LETMD1-220ENST00000549686 KRBOX1C9JBD0 128 aa13.04□□□□□ -0.32
LETMD1-220ENST00000549686 M0R3E3 92 aa13.04□□□□□ -0.32
LETMD1-220ENST00000549686 AKR1C3P42330 323 aa13.04□□□□□ -0.32
LETMD1-220ENST00000549686 KRTAP21-3Q3LHN1 58 aa13.04□□□□□ -0.32
LETMD1-220ENST00000549686 ZNF738Q8NE65 137 aa13.04□□□□□ -0.32
LETMD1-220ENST00000549686 C2CD4CQ8TF44 421 aa13.04□□□□□ -0.32
LETMD1-220ENST00000549686 LINC00052Q96N35 136 aa13.04□□□□□ -0.32
LETMD1-220ENST00000549686 SELENOKQ9Y6D0 94 aa13.04□□□□□ -0.32
LETMD1-220ENST00000549686 COL6A5A8TX70 2615 aa13.04□□□□□ -0.32
LETMD1-220ENST00000549686 WIPF1O43516 503 aa13.03□□□□□ -0.32
LETMD1-220ENST00000549686 GUCA2BQ16661 112 aa13.03□□□□□ -0.32
LETMD1-220ENST00000549686 PRR31Q5SQ13 230 aa13.03□□□□□ -0.32
LETMD1-220ENST00000549686 IGFL4Q6B9Z1 124 aa13.03□□□□□ -0.32
LETMD1-220ENST00000549686 RNF182Q8N6D2 247 aa13.03□□□□□ -0.32
LETMD1-220ENST00000549686 FMC1Q96HJ9 113 aa13.03□□□□□ -0.32
LETMD1-220ENST00000549686 KLF12Q9Y4X4 402 aa13.03□□□□□ -0.32
LETMD1-220ENST00000549686 HLA-DMBP28068 263 aa13.02□□□□□ -0.33
LETMD1-220ENST00000549686 CEBPGP53567 150 aa13.02□□□□□ -0.33
LETMD1-220ENST00000549686 TAS2R60P59551 318 aa13.02□□□□□ -0.33
LETMD1-220ENST00000549686 GNG5P63218 68 aa13.02□□□□□ -0.33
LETMD1-220ENST00000549686 GOLT1AQ6ZVE7 132 aa13.02□□□□□ -0.33
LETMD1-220ENST00000549686 TMEM75Q8N9X5 138 aa13.02□□□□□ -0.33
LETMD1-220ENST00000549686 C20orf173Q96LM9 149 aa13.02□□□□□ -0.33
LETMD1-220ENST00000549686 FAM110AQ9BQ89 295 aa13.02□□□□□ -0.33
LETMD1-220ENST00000549686 SEC11CQ9BY50 192 aa13.02□□□□□ -0.33
LETMD1-220ENST00000549686 PARLQ9H300 379 aa13.02□□□□□ -0.33
LETMD1-220ENST00000549686 RPH3ALQ9UNE2 315 aa13.02□□□□□ -0.33
LETMD1-220ENST00000549686 ZNF256Q9Y2P7 627 aaPredicted RBP13.02□□□□□ -0.33
LETMD1-220ENST00000549686 TRBV6-1A0A0K0K1D8 114 aa13.01□□□□□ -0.33
LETMD1-220ENST00000549686 IZUMO1RA6ND01 250 aa13.01□□□□□ -0.33
LETMD1-220ENST00000549686 ZNF688P0C7X2 276 aa13.01□□□□□ -0.33
LETMD1-220ENST00000549686 UBE2G1P62253 170 aa13.01□□□□□ -0.33
LETMD1-220ENST00000549686 TMEM183BQ1AE95 376 aa13.01□□□□□ -0.33
LETMD1-220ENST00000549686 PSMG4Q5JS54 123 aa13.01□□□□□ -0.33
LETMD1-220ENST00000549686 ZMAT5Q9UDW3 170 aaKnown RBP13.01□□□□□ -0.33
LETMD1-220ENST00000549686 ZNF727A8MUV8 499 aa13□□□□□ -0.33
LETMD1-220ENST00000549686 ZNF705FA8MVS1 300 aaPredicted RBP13□□□□□ -0.33
LETMD1-220ENST00000549686 F8W036 122 aa13□□□□□ -0.33
LETMD1-220ENST00000549686 RPL35P42766 123 aaKnown RBP13□□□□□ -0.33
LETMD1-220ENST00000549686 BEAN1Q3B7T3 259 aa13□□□□□ -0.33
LETMD1-220ENST00000549686 OR10J6PQ8NGY7 276 aa13□□□□□ -0.33
LETMD1-220ENST00000549686 SMIM7Q9BQ49 75 aa13□□□□□ -0.33
LETMD1-220ENST00000549686 C9JCJ5 164 aa12.99□□□□□ -0.33
LETMD1-220ENST00000549686 ZNF674Q2M3X9 581 aa12.99□□□□□ -0.33
LETMD1-220ENST00000549686 FOXI2Q6ZQN5 318 aa12.99□□□□□ -0.33
LETMD1-220ENST00000549686 FAM24BQ8N5W8 94 aa12.99□□□□□ -0.33
LETMD1-220ENST00000549686 OR8A1Q8NGG7 326 aa12.99□□□□□ -0.33
LETMD1-220ENST00000549686 SMIM12Q96EX1 92 aa12.99□□□□□ -0.33
LETMD1-220ENST00000549686 NIPSNAP3BQ9BS92 247 aa12.99□□□□□ -0.33
LETMD1-220ENST00000549686 IGLL1P15814 213 aa12.98□□□□□ -0.33
LETMD1-220ENST00000549686 FLI1Q01543 452 aaPredicted RBP12.98□□□□□ -0.33
LETMD1-220ENST00000549686 C10orf91Q5T1B1 145 aa12.98□□□□□ -0.33
LETMD1-220ENST00000549686 TMEM78Q5T7P6 136 aa12.98□□□□□ -0.33
LETMD1-220ENST00000549686 EBLN2Q6P2I7 272 aa12.98□□□□□ -0.33
LETMD1-220ENST00000549686 C9orf47Q6ZRZ4 202 aa12.98□□□□□ -0.33
LETMD1-220ENST00000549686 SPATA3Q8NHX4 192 aa12.98□□□□□ -0.33
LETMD1-220ENST00000549686 LINC00477Q96M19 166 aa12.98□□□□□ -0.33
LETMD1-220ENST00000549686 MAP6D1Q9H9H5 199 aa12.98□□□□□ -0.33
LETMD1-220ENST00000549686 PPP1R14DQ9NXH3 145 aa12.98□□□□□ -0.33
LETMD1-220ENST00000549686 ZFP30Q9Y2G7 519 aa12.98□□□□□ -0.33
LETMD1-220ENST00000549686 CARHSP1Q9Y2V2 147 aaKnown RBP12.98□□□□□ -0.33
LETMD1-220ENST00000549686 LY96Q9Y6Y9 160 aa12.98□□□□□ -0.33
LETMD1-220ENST00000549686 STAB1Q9NY15 2570 aa12.97□□□□□ -0.33
LETMD1-220ENST00000549686 IGKV2-40A0A087WW87 121 aaPredicted RBP12.97□□□□□ -0.33
LETMD1-220ENST00000549686 OR11H12B2RN74 326 aa12.97□□□□□ -0.33
LETMD1-220ENST00000549686 PRAC2D3DTV9 90 aa12.97□□□□□ -0.33
LETMD1-220ENST00000549686 DUSP14O95147 198 aaKnown RBP12.97□□□□□ -0.33
LETMD1-220ENST00000549686 IGKV2D-40P01614 121 aaPredicted RBP12.97□□□□□ -0.33
LETMD1-220ENST00000549686 GNG4P50150 75 aa12.97□□□□□ -0.33
LETMD1-220ENST00000549686 DEFB131AP59861 70 aa12.97□□□□□ -0.33
LETMD1-220ENST00000549686 DERL1Q9BUN8 251 aa12.97□□□□□ -0.33
LETMD1-220ENST00000549686 NAT8Q9UHE5 227 aa12.97□□□□□ -0.33
LETMD1-220ENST00000549686 PSG8Q9UQ74 426 aa12.97□□□□□ -0.33
LETMD1-220ENST00000549686 TRBV7-9A0A0J9YWB2 115 aa12.96□□□□□ -0.33
LETMD1-220ENST00000549686 NPIPB6E9PJ23 425 aa12.96□□□□□ -0.33
LETMD1-220ENST00000549686 LTAP01374 205 aa12.96□□□□□ -0.33
LETMD1-220ENST00000549686 IGLV2-11P01706 119 aa12.96□□□□□ -0.33
LETMD1-220ENST00000549686 S100A1P23297 94 aa12.96□□□□□ -0.33
LETMD1-220ENST00000549686 PNRC1Q12796 327 aaPredicted RBP12.96□□□□□ -0.33
LETMD1-220ENST00000549686 TMEM241Q24JQ0 296 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms