RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 RPUSD4Q96CM3 377 aaKnown RBP11.88□□□□□ -0.51
TRAFD1-203ENST00000547063 RARRES2Q99969 163 aa11.88□□□□□ -0.51
TRAFD1-203ENST00000547063 TRAV8-2A0A0B4J237 113 aa11.87□□□□□ -0.51
TRAFD1-203ENST00000547063 TMEM250H0YL14 139 aa11.87□□□□□ -0.51
TRAFD1-203ENST00000547063 IGLL1P15814 213 aa11.87□□□□□ -0.51
TRAFD1-203ENST00000547063 ATP5G3P48201 142 aa11.87□□□□□ -0.51
TRAFD1-203ENST00000547063 EPDR1Q9UM22 224 aa11.87□□□□□ -0.51
TRAFD1-203ENST00000547063 IZUMO1RA6ND01 250 aa11.86□□□□□ -0.51
TRAFD1-203ENST00000547063 CD81P60033 236 aa11.86□□□□□ -0.51
TRAFD1-203ENST00000547063 ZNF738Q8NE65 137 aa11.86□□□□□ -0.51
TRAFD1-203ENST00000547063 LINC00052Q96N35 136 aa11.86□□□□□ -0.51
TRAFD1-203ENST00000547063 FAM110AQ9BQ89 295 aa11.86□□□□□ -0.51
TRAFD1-203ENST00000547063 ATG101Q9BSB4 218 aa11.86□□□□□ -0.51
TRAFD1-203ENST00000547063 TREM1Q9NP99 234 aa11.86□□□□□ -0.51
TRAFD1-203ENST00000547063 ZNF256Q9Y2P7 627 aaPredicted RBP11.86□□□□□ -0.51
TRAFD1-203ENST00000547063 FBLL1A6NHQ2 334 aaKnown RBP11.85□□□□□ -0.51
TRAFD1-203ENST00000547063 ZNF688P0C7X2 276 aa11.85□□□□□ -0.51
TRAFD1-203ENST00000547063 BEAN1Q3B7T3 259 aa11.85□□□□□ -0.51
TRAFD1-203ENST00000547063 LCE2DQ5TA82 110 aaPredicted RBP11.85□□□□□ -0.51
TRAFD1-203ENST00000547063 RNF182Q8N6D2 247 aa11.85□□□□□ -0.51
TRAFD1-203ENST00000547063 RBAKDNA6NC62 111 aa11.84□□□□□ -0.51
TRAFD1-203ENST00000547063 M0R3E3 92 aa11.84□□□□□ -0.51
TRAFD1-203ENST00000547063 PEX7O00628 323 aa11.84□□□□□ -0.51
TRAFD1-203ENST00000547063 TCRAP04437 139 aa11.84□□□□□ -0.51
TRAFD1-203ENST00000547063 S100A9P06702 114 aaKnown RBP11.84□□□□□ -0.51
TRAFD1-203ENST00000547063 PSMG4Q5JS54 123 aa11.84□□□□□ -0.51
TRAFD1-203ENST00000547063 IGFL4Q6B9Z1 124 aa11.84□□□□□ -0.51
TRAFD1-203ENST00000547063 CYB561D1Q8N8Q1 229 aa11.84□□□□□ -0.51
TRAFD1-203ENST00000547063 C11orf52Q96A22 123 aa11.84□□□□□ -0.51
TRAFD1-203ENST00000547063 SLC35B3Q9H1N7 401 aa11.84□□□□□ -0.51
TRAFD1-203ENST00000547063 OR11H12B2RN74 326 aa11.83□□□□□ -0.52
TRAFD1-203ENST00000547063 DIRC3C9JPN6 131 aa11.83□□□□□ -0.52
TRAFD1-203ENST00000547063 SRP19P09132 144 aaKnown RBP11.83□□□□□ -0.52
TRAFD1-203ENST00000547063 HLA-DMBP28068 263 aa11.83□□□□□ -0.52
TRAFD1-203ENST00000547063 AKR1C3P42330 323 aa11.83□□□□□ -0.52
TRAFD1-203ENST00000547063 CNN1P51911 297 aaKnown RBP11.83□□□□□ -0.52
TRAFD1-203ENST00000547063 EBLN2Q6P2I7 272 aa11.83□□□□□ -0.52
TRAFD1-203ENST00000547063 GTSCR1Q86UQ5 136 aa11.83□□□□□ -0.52
TRAFD1-203ENST00000547063 OR10J6PQ8NGY7 276 aa11.83□□□□□ -0.52
TRAFD1-203ENST00000547063 RPH3ALQ9UNE2 315 aa11.83□□□□□ -0.52
TRAFD1-203ENST00000547063 NOTCH3Q9UM47 2321 aa11.82□□□□□ -0.52
TRAFD1-203ENST00000547063 SCO2A0A1W2PP80 73 aa11.82□□□□□ -0.52
TRAFD1-203ENST00000547063 DEFB131AP59861 70 aa11.82□□□□□ -0.52
TRAFD1-203ENST00000547063 GOLT1AQ6ZVE7 132 aa11.82□□□□□ -0.52
TRAFD1-203ENST00000547063 C20orf173Q96LM9 149 aa11.82□□□□□ -0.52
TRAFD1-203ENST00000547063 MAP6D1Q9H9H5 199 aa11.82□□□□□ -0.52
TRAFD1-203ENST00000547063 ZNF705FA8MVS1 300 aaPredicted RBP11.81□□□□□ -0.52
TRAFD1-203ENST00000547063 DUSP14O95147 198 aaKnown RBP11.81□□□□□ -0.52
TRAFD1-203ENST00000547063 UBE2G1P62253 170 aa11.81□□□□□ -0.52
TRAFD1-203ENST00000547063 GNG5P63218 68 aa11.81□□□□□ -0.52
TRAFD1-203ENST00000547063 SRSF3P84103 164 aaKnown RBP11.81□□□□□ -0.52
TRAFD1-203ENST00000547063 FOXI2Q6ZQN5 318 aa11.81□□□□□ -0.52
TRAFD1-203ENST00000547063 FAM24BQ8N5W8 94 aa11.81□□□□□ -0.52
TRAFD1-203ENST00000547063 C2CD4CQ8TF44 421 aa11.81□□□□□ -0.52
TRAFD1-203ENST00000547063 FMC1Q96HJ9 113 aa11.81□□□□□ -0.52
TRAFD1-203ENST00000547063 SORL1Q92673 2214 aa11.8□□□□□ -0.52
TRAFD1-203ENST00000547063 FAM74A3Q4VXF1 159 aa11.8□□□□□ -0.52
TRAFD1-203ENST00000547063 OXLD1Q5BKU9 147 aa11.8□□□□□ -0.52
TRAFD1-203ENST00000547063 SOHLH1Q5JUK2 328 aa11.8□□□□□ -0.52
TRAFD1-203ENST00000547063 TMEM78Q5T7P6 136 aa11.8□□□□□ -0.52
TRAFD1-203ENST00000547063 TMEM75Q8N9X5 138 aa11.8□□□□□ -0.52
TRAFD1-203ENST00000547063 OR8A1Q8NGG7 326 aa11.8□□□□□ -0.52
TRAFD1-203ENST00000547063 LINC00477Q96M19 166 aa11.8□□□□□ -0.52
TRAFD1-203ENST00000547063 KLF12Q9Y4X4 402 aa11.8□□□□□ -0.52
TRAFD1-203ENST00000547063 VWFP04275 2813 aa11.8□□□□□ -0.52
TRAFD1-203ENST00000547063 A0A0J9YX75 114 aa11.79□□□□□ -0.52
TRAFD1-203ENST00000547063 CEBPGP53567 150 aa11.79□□□□□ -0.52
TRAFD1-203ENST00000547063 TAS2R60P59551 318 aa11.79□□□□□ -0.52
TRAFD1-203ENST00000547063 EGFEM1PQ0D2K5 195 aa11.79□□□□□ -0.52
TRAFD1-203ENST00000547063 TMEM183BQ1AE95 376 aa11.79□□□□□ -0.52
TRAFD1-203ENST00000547063 ODF3L2Q3SX64 289 aa11.79□□□□□ -0.52
TRAFD1-203ENST00000547063 C9orf47Q6ZRZ4 202 aa11.79□□□□□ -0.52
TRAFD1-203ENST00000547063 CITED4Q96RK1 184 aa11.79□□□□□ -0.52
TRAFD1-203ENST00000547063 SAV1Q9H4B6 383 aaPredicted RBP11.79□□□□□ -0.52
TRAFD1-203ENST00000547063 IGKV2-40A0A087WW87 121 aaPredicted RBP11.78□□□□□ -0.52
TRAFD1-203ENST00000547063 TRBV6-1A0A0K0K1D8 114 aa11.78□□□□□ -0.52
TRAFD1-203ENST00000547063 C9JQL5 133 aa11.78□□□□□ -0.52
TRAFD1-203ENST00000547063 IGKV2D-40P01614 121 aaPredicted RBP11.78□□□□□ -0.52
TRAFD1-203ENST00000547063 SFTA3P0C7M3 94 aa11.78□□□□□ -0.52
TRAFD1-203ENST00000547063 RPL35P42766 123 aaKnown RBP11.78□□□□□ -0.52
TRAFD1-203ENST00000547063 FLI1Q01543 452 aaPredicted RBP11.78□□□□□ -0.52
TRAFD1-203ENST00000547063 HIST1H1AQ02539 215 aaPredicted RBP11.78□□□□□ -0.52
TRAFD1-203ENST00000547063 PARLQ9H300 379 aa11.78□□□□□ -0.52
TRAFD1-203ENST00000547063 PPP1R14DQ9NXH3 145 aa11.78□□□□□ -0.52
TRAFD1-203ENST00000547063 LENEPQ9Y5L5 61 aa11.78□□□□□ -0.52
TRAFD1-203ENST00000547063 TMEM218A2RU14 115 aa11.77□□□□□ -0.53
TRAFD1-203ENST00000547063 PRAC2D3DTV9 90 aa11.77□□□□□ -0.53
TRAFD1-203ENST00000547063 NPIPB6E9PJ23 425 aa11.77□□□□□ -0.53
TRAFD1-203ENST00000547063 CD7P09564 240 aa11.77□□□□□ -0.53
TRAFD1-203ENST00000547063 HLA-DRB4P13762 266 aa11.77□□□□□ -0.53
TRAFD1-203ENST00000547063 SAPCD1Q5SSQ6 148 aa11.77□□□□□ -0.53
TRAFD1-203ENST00000547063 SAMD5Q5TGI4 173 aa11.77□□□□□ -0.53
TRAFD1-203ENST00000547063 SLC7A5P1Q8MH63 180 aa11.77□□□□□ -0.53
TRAFD1-203ENST00000547063 SMIM7Q9BQ49 75 aa11.77□□□□□ -0.53
TRAFD1-203ENST00000547063 NDFIP1Q9BT67 221 aa11.77□□□□□ -0.53
TRAFD1-203ENST00000547063 ZFP30Q9Y2G7 519 aa11.77□□□□□ -0.53
TRAFD1-203ENST00000547063 HLA-DRB4X5D2U9 266 aa11.77□□□□□ -0.53
TRAFD1-203ENST00000547063 TRBV7-9A0A0J9YWB2 115 aa11.76□□□□□ -0.53
TRAFD1-203ENST00000547063 ZNF727A8MUV8 499 aa11.76□□□□□ -0.53
TRAFD1-203ENST00000547063 C9JCJ5 164 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms