RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 M0QZ24 198 aa10.14□□□□□ -0.79
CPSF7-223ENST00000544669 ZFP36P26651 326 aaKnown RBP10.14□□□□□ -0.79
CPSF7-223ENST00000544669 RHOGP84095 191 aa10.14□□□□□ -0.79
CPSF7-223ENST00000544669 FAM223AQ8IWN6 122 aa10.14□□□□□ -0.79
CPSF7-223ENST00000544669 DYNAPQ8N1N2 210 aa10.14□□□□□ -0.79
CPSF7-223ENST00000544669 MAP1LC3AQ9H492 121 aa10.14□□□□□ -0.79
CPSF7-223ENST00000544669 LENEPQ9Y5L5 61 aa10.14□□□□□ -0.79
CPSF7-223ENST00000544669 IGKV2-40A0A087WW87 121 aaPredicted RBP10.13□□□□□ -0.79
CPSF7-223ENST00000544669 TCF21O43680 179 aa10.13□□□□□ -0.79
CPSF7-223ENST00000544669 IGKV2D-40P01614 121 aaPredicted RBP10.13□□□□□ -0.79
CPSF7-223ENST00000544669 ORM1P02763 201 aa10.13□□□□□ -0.79
CPSF7-223ENST00000544669 CLEC3BP05452 202 aa10.13□□□□□ -0.79
CPSF7-223ENST00000544669 COX8AP10176 69 aa10.13□□□□□ -0.79
CPSF7-223ENST00000544669 UBE2V1Q13404 147 aa10.13□□□□□ -0.79
CPSF7-223ENST00000544669 COL25A1Q9BXS0 654 aaPredicted RBP10.13□□□□□ -0.79
CPSF7-223ENST00000544669 SIGLEC8Q9NYZ4 499 aa10.13□□□□□ -0.79
CPSF7-223ENST00000544669 CBY1Q9Y3M2 126 aa10.13□□□□□ -0.79
CPSF7-223ENST00000544669 SMAD5-AS1Q9Y6J3 95 aa10.13□□□□□ -0.79
CPSF7-223ENST00000544669 S4R3C0 116 aa10.13□□□□□ -0.79
CPSF7-223ENST00000544669 LINC01546A6NGU7 62 aa10.12□□□□□ -0.79
CPSF7-223ENST00000544669 SIVA1O15304 175 aa10.12□□□□□ -0.79
CPSF7-223ENST00000544669 BRI3O95415 125 aa10.12□□□□□ -0.79
CPSF7-223ENST00000544669 GPR183P32249 361 aa10.12□□□□□ -0.79
CPSF7-223ENST00000544669 IFI27P40305 119 aaPredicted RBP10.12□□□□□ -0.79
CPSF7-223ENST00000544669 TFPI2P48307 235 aa10.12□□□□□ -0.79
CPSF7-223ENST00000544669 PTTG1IPP53801 180 aa10.12□□□□□ -0.79
CPSF7-223ENST00000544669 ATP5G2Q06055 141 aa10.12□□□□□ -0.79
CPSF7-223ENST00000544669 MRPL51Q4U2R6 128 aaKnown RBP10.12□□□□□ -0.79
CPSF7-223ENST00000544669 ZFAND3Q9H8U3 227 aa10.12□□□□□ -0.79
CPSF7-223ENST00000544669 CENPVL3A0A0U1RRI6 287 aa10.12□□□□□ -0.79
CPSF7-223ENST00000544669 NPFFO15130 113 aa10.12□□□□□ -0.79
CPSF7-223ENST00000544669 NPSP0C0P6 89 aa10.12□□□□□ -0.79
CPSF7-223ENST00000544669 ZNF138P52744 262 aa10.12□□□□□ -0.79
CPSF7-223ENST00000544669 CRIP2P52943 208 aaPredicted RBP10.12□□□□□ -0.79
CPSF7-223ENST00000544669 TMEM78Q5T7P6 136 aa10.12□□□□□ -0.79
CPSF7-223ENST00000544669 AMN1Q8IY45 258 aa10.12□□□□□ -0.79
CPSF7-223ENST00000544669 hDV102S1A0JD36 115 aa10.11□□□□□ -0.79
CPSF7-223ENST00000544669 CD5LO43866 347 aa10.11□□□□□ -0.79
CPSF7-223ENST00000544669 SAA4P35542 130 aa10.11□□□□□ -0.79
CPSF7-223ENST00000544669 CACNG7P62955 275 aa10.11□□□□□ -0.79
CPSF7-223ENST00000544669 SEC11AP67812 179 aa10.11□□□□□ -0.79
CPSF7-223ENST00000544669 ECSCRQ19T08 205 aa10.11□□□□□ -0.79
CPSF7-223ENST00000544669 LINC00173Q6ZV60 143 aa10.11□□□□□ -0.79
CPSF7-223ENST00000544669 OR9G4Q8NGQ1 327 aa10.11□□□□□ -0.79
CPSF7-223ENST00000544669 SMPXQ9UHP9 88 aa10.11□□□□□ -0.79
CPSF7-223ENST00000544669 ACACAQ13085 2346 aa10.1□□□□□ -0.79
CPSF7-223ENST00000544669 TMSB15BA0A087X1C1 80 aa10.1□□□□□ -0.79
CPSF7-223ENST00000544669 H3BUA1 57 aa10.1□□□□□ -0.79
CPSF7-223ENST00000544669 ATP6V0E1O15342 81 aa10.1□□□□□ -0.79
CPSF7-223ENST00000544669 NUDT3O95989 172 aa10.1□□□□□ -0.79
CPSF7-223ENST00000544669 CDSNQ15517 529 aa10.1□□□□□ -0.79
CPSF7-223ENST00000544669 PIFOQ8TCI5 191 aa10.1□□□□□ -0.79
CPSF7-223ENST00000544669 VGLL1Q99990 258 aa10.1□□□□□ -0.79
CPSF7-223ENST00000544669 UBTD1Q9HAC8 227 aa10.1□□□□□ -0.79
CPSF7-223ENST00000544669 MOB4Q9Y3A3 225 aa10.1□□□□□ -0.79
CPSF7-223ENST00000544669 TMEM213A2RRL7 107 aa10.1□□□□□ -0.79
CPSF7-223ENST00000544669 IGHV3-23P01764 117 aa10.1□□□□□ -0.79
CPSF7-223ENST00000544669 LMO4P61968 165 aa10.1□□□□□ -0.79
CPSF7-223ENST00000544669 NHLH1Q02575 133 aa10.1□□□□□ -0.79
CPSF7-223ENST00000544669 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.1□□□□□ -0.79
CPSF7-223ENST00000544669 BCL6BQ8N143 479 aaPredicted RBP10.1□□□□□ -0.79
CPSF7-223ENST00000544669 DEFB125Q8N687 156 aa10.1□□□□□ -0.79
CPSF7-223ENST00000544669 IFI27L1Q96BM0 104 aa10.1□□□□□ -0.79
CPSF7-223ENST00000544669 ZNF292O60281 2723 aa10.09□□□□□ -0.79
CPSF7-223ENST00000544669 IGHG4P01861 327 aa10.09□□□□□ -0.79
CPSF7-223ENST00000544669 MPV17L2Q567V2 206 aa10.09□□□□□ -0.79
CPSF7-223ENST00000544669 BVES-AS1Q5T3Y7 98 aa10.09□□□□□ -0.79
CPSF7-223ENST00000544669 C9orf47Q6ZRZ4 202 aa10.09□□□□□ -0.79
CPSF7-223ENST00000544669 C9orf139Q6ZV77 190 aa10.09□□□□□ -0.79
CPSF7-223ENST00000544669 U3KQE9 123 aa10.09□□□□□ -0.79
CPSF7-223ENST00000544669 PKDREJQ9NTG1 2253 aa10.09□□□□□ -0.79
CPSF7-223ENST00000544669 DSPP15924 2871 aaKnown RBP10.08□□□□□ -0.8
CPSF7-223ENST00000544669 LOC389332A0A1B0GUA5 103 aa10.08□□□□□ -0.8
CPSF7-223ENST00000544669 PRSS47A8MTI9 375 aa10.08□□□□□ -0.8
CPSF7-223ENST00000544669 PLXNB1O43157 2135 aa10.08□□□□□ -0.8
CPSF7-223ENST00000544669 CLEC19AQ6UXS0 136 aa10.08□□□□□ -0.8
CPSF7-223ENST00000544669 C5orf56Q8N8D9 126 aa10.08□□□□□ -0.8
CPSF7-223ENST00000544669 OR8A1Q8NGG7 326 aa10.08□□□□□ -0.8
CPSF7-223ENST00000544669 ROS1P08922 2347 aa10.08□□□□□ -0.8
CPSF7-223ENST00000544669 POLEQ07864 2286 aa10.07□□□□□ -0.8
CPSF7-223ENST00000544669 TRAV41A0A0B4J266 112 aa10.07□□□□□ -0.8
CPSF7-223ENST00000544669 A6NDN8 102 aa10.07□□□□□ -0.8
CPSF7-223ENST00000544669 NDUFS8O00217 210 aa10.07□□□□□ -0.8
CPSF7-223ENST00000544669 FCER1GP30273 86 aa10.07□□□□□ -0.8
CPSF7-223ENST00000544669 SAMD13Q5VXD3 122 aa10.07□□□□□ -0.8
CPSF7-223ENST00000544669 OR4X2Q8NGF9 303 aa10.07□□□□□ -0.8
CPSF7-223ENST00000544669 USMG5Q96IX5 58 aa10.07□□□□□ -0.8
CPSF7-223ENST00000544669 LINC00477Q96M19 166 aa10.07□□□□□ -0.8
CPSF7-223ENST00000544669 TIMM8BQ9Y5J9 83 aaPredicted RBP10.07□□□□□ -0.8
CPSF7-223ENST00000544669 LOC400499M0QZD8 3231 aa10.07□□□□□ -0.8
CPSF7-223ENST00000544669 IGHV4-4A0A075B6R2 117 aa10.07□□□□□ -0.8
CPSF7-223ENST00000544669 H0Y8G0 127 aa10.07□□□□□ -0.8
CPSF7-223ENST00000544669 ATP5LO75964 103 aa10.07□□□□□ -0.8
CPSF7-223ENST00000544669 ZNF80P51504 273 aaPredicted RBP10.07□□□□□ -0.8
CPSF7-223ENST00000544669 PAX8Q06710 450 aa10.07□□□□□ -0.8
CPSF7-223ENST00000544669 FBLN7Q53RD9 439 aa10.07□□□□□ -0.8
CPSF7-223ENST00000544669 Q8TAT8 98 aa10.07□□□□□ -0.8
CPSF7-223ENST00000544669 AJUBAQ96IF1 538 aa10.07□□□□□ -0.8
CPSF7-223ENST00000544669 CEP250Q9BV73 2442 aa10.06□□□□□ -0.8
CPSF7-223ENST00000544669 TRBV7-9A0A0J9YWB2 115 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms