RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 SPAG8Q99932 426 aaPredicted RBP7.18□□□□□ -1.26
YBX3-215ENST00000544504 Q9H3A6 140 aa7.18□□□□□ -1.26
YBX3-215ENST00000544504 TREM1Q9NP99 234 aa7.18□□□□□ -1.26
YBX3-215ENST00000544504 ZNF331Q9NQX6 463 aaPredicted RBP7.18□□□□□ -1.26
YBX3-215ENST00000544504 SMAD5-AS1Q9Y6J3 95 aa7.18□□□□□ -1.26
YBX3-215ENST00000544504 DNAH1Q9P2D7 4330 aa7.17□□□□□ -1.26
YBX3-215ENST00000544504 PGPA6NDG6 321 aa7.17□□□□□ -1.26
YBX3-215ENST00000544504 OR4C46A6NHA9 309 aa7.17□□□□□ -1.26
YBX3-215ENST00000544504 FBLL1A6NHQ2 334 aaKnown RBP7.17□□□□□ -1.26
YBX3-215ENST00000544504 NDUFB4O95168 129 aa7.17□□□□□ -1.26
YBX3-215ENST00000544504 SLC25A5P05141 298 aaKnown RBP7.17□□□□□ -1.26
YBX3-215ENST00000544504 S100A9P06702 114 aaKnown RBP7.17□□□□□ -1.26
YBX3-215ENST00000544504 SNRPD3P62318 126 aaKnown RBP7.17□□□□□ -1.26
YBX3-215ENST00000544504 OXLD1Q5BKU9 147 aa7.17□□□□□ -1.26
YBX3-215ENST00000544504 LCN12Q6JVE5 192 aa7.17□□□□□ -1.26
YBX3-215ENST00000544504 WFDC9Q8NEX5 89 aa7.17□□□□□ -1.26
YBX3-215ENST00000544504 SLC35B3Q9H1N7 401 aa7.17□□□□□ -1.26
YBX3-215ENST00000544504 ZMAT5Q9UDW3 170 aaKnown RBP7.17□□□□□ -1.26
YBX3-215ENST00000544504 YTHDF2Q9Y5A9 579 aaKnown RBP7.17□□□□□ -1.26
YBX3-215ENST00000544504 GGTLC3B5MD39 225 aa7.16□□□□□ -1.26
YBX3-215ENST00000544504 IGLV1-51P01701 117 aa7.16□□□□□ -1.26
YBX3-215ENST00000544504 FAM74A3Q4VXF1 159 aa7.16□□□□□ -1.26
YBX3-215ENST00000544504 ADAMTSL5Q6ZMM2 481 aa7.16□□□□□ -1.26
YBX3-215ENST00000544504 CCDC28AQ8IWP9 274 aa7.16□□□□□ -1.26
YBX3-215ENST00000544504 C11orf52Q96A22 123 aa7.16□□□□□ -1.26
YBX3-215ENST00000544504 RARRES2Q99969 163 aa7.16□□□□□ -1.26
YBX3-215ENST00000544504 ATG101Q9BSB4 218 aa7.16□□□□□ -1.26
YBX3-215ENST00000544504 MS4A6AQ9H2W1 248 aa7.16□□□□□ -1.26
YBX3-215ENST00000544504 EPDR1Q9UM22 224 aa7.16□□□□□ -1.26
YBX3-215ENST00000544504 H3BTX0 84 aa7.15□□□□□ -1.26
YBX3-215ENST00000544504 K7EQG2 157 aa7.15□□□□□ -1.26
YBX3-215ENST00000544504 SLC17A3O00476 420 aa7.15□□□□□ -1.26
YBX3-215ENST00000544504 EDN2P20800 178 aa7.15□□□□□ -1.26
YBX3-215ENST00000544504 ATP5G3P48201 142 aa7.15□□□□□ -1.26
YBX3-215ENST00000544504 CNN1P51911 297 aaKnown RBP7.15□□□□□ -1.26
YBX3-215ENST00000544504 CD81P60033 236 aa7.15□□□□□ -1.26
YBX3-215ENST00000544504 PSG3Q16557 428 aa7.15□□□□□ -1.26
YBX3-215ENST00000544504 CD300EQ496F6 205 aaPredicted RBP7.15□□□□□ -1.26
YBX3-215ENST00000544504 TMEM61Q8N0U2 210 aa7.15□□□□□ -1.26
YBX3-215ENST00000544504 CYB561D1Q8N8Q1 229 aa7.15□□□□□ -1.26
YBX3-215ENST00000544504 DCANP1Q8TF63 244 aa7.15□□□□□ -1.26
YBX3-215ENST00000544504 C17orf77Q96MU5 243 aa7.15□□□□□ -1.26
YBX3-215ENST00000544504 CITED4Q96RK1 184 aa7.15□□□□□ -1.26
YBX3-215ENST00000544504 HYDINQ4G0P3 5121 aa7.14□□□□□ -1.27
YBX3-215ENST00000544504 IGKV3-7A0A075B6H7 116 aa7.14□□□□□ -1.27
YBX3-215ENST00000544504 RBAKDNA6NC62 111 aa7.14□□□□□ -1.27
YBX3-215ENST00000544504 KRBOX1C9JBD0 128 aa7.14□□□□□ -1.27
YBX3-215ENST00000544504 PEX7O00628 323 aa7.14□□□□□ -1.27
YBX3-215ENST00000544504 SOCS3O14543 225 aa7.14□□□□□ -1.27
YBX3-215ENST00000544504 SRP19P09132 144 aaKnown RBP7.14□□□□□ -1.27
YBX3-215ENST00000544504 SNRPCP09234 159 aaKnown RBP7.14□□□□□ -1.27
YBX3-215ENST00000544504 AKR1C3P42330 323 aa7.14□□□□□ -1.27
YBX3-215ENST00000544504 SOHLH1Q5JUK2 328 aa7.14□□□□□ -1.27
YBX3-215ENST00000544504 EXOC3-AS1Q8N2X6 119 aa7.14□□□□□ -1.27
YBX3-215ENST00000544504 GBGT1Q8N5D6 347 aa7.14□□□□□ -1.27
YBX3-215ENST00000544504 ZNF738Q8NE65 137 aa7.14□□□□□ -1.27
YBX3-215ENST00000544504 KRTAP17-1Q9BYP8 105 aa7.14□□□□□ -1.27
YBX3-215ENST00000544504 TMEM218A2RU14 115 aa7.13□□□□□ -1.27
YBX3-215ENST00000544504 DIRC3C9JPN6 131 aa7.13□□□□□ -1.27
YBX3-215ENST00000544504 TCRAP04437 139 aa7.13□□□□□ -1.27
YBX3-215ENST00000544504 SFTA3P0C7M3 94 aa7.13□□□□□ -1.27
YBX3-215ENST00000544504 TFPI2P48307 235 aa7.13□□□□□ -1.27
YBX3-215ENST00000544504 TAS2R60P59551 318 aa7.13□□□□□ -1.27
YBX3-215ENST00000544504 UBE2G1P62253 170 aa7.13□□□□□ -1.27
YBX3-215ENST00000544504 GUCA2BQ16661 112 aa7.13□□□□□ -1.27
YBX3-215ENST00000544504 WFDC3Q8IUB2 231 aa7.13□□□□□ -1.27
YBX3-215ENST00000544504 SLC7A5P1Q8MH63 180 aa7.13□□□□□ -1.27
YBX3-215ENST00000544504 OR10J6PQ8NGY7 276 aa7.13□□□□□ -1.27
YBX3-215ENST00000544504 FMC1Q96HJ9 113 aa7.13□□□□□ -1.27
YBX3-215ENST00000544504 LINC00052Q96N35 136 aa7.13□□□□□ -1.27
YBX3-215ENST00000544504 SMIM7Q9BQ49 75 aa7.13□□□□□ -1.27
YBX3-215ENST00000544504 FAM110AQ9BQ89 295 aa7.13□□□□□ -1.27
YBX3-215ENST00000544504 TRAV8-2A0A0B4J237 113 aa7.12□□□□□ -1.27
YBX3-215ENST00000544504 TRBV6-1A0A0K0K1D8 114 aa7.12□□□□□ -1.27
YBX3-215ENST00000544504 SCO2A0A1W2PP80 73 aa7.12□□□□□ -1.27
YBX3-215ENST00000544504 ZNF727A8MUV8 499 aa7.12□□□□□ -1.27
YBX3-215ENST00000544504 F8W036 122 aa7.12□□□□□ -1.27
YBX3-215ENST00000544504 K7EIL1 84 aa7.12□□□□□ -1.27
YBX3-215ENST00000544504 M0R3E3 92 aa7.12□□□□□ -1.27
YBX3-215ENST00000544504 DUSP14O95147 198 aaKnown RBP7.12□□□□□ -1.27
YBX3-215ENST00000544504 CEBPGP53567 150 aa7.12□□□□□ -1.27
YBX3-215ENST00000544504 SRSF3P84103 164 aaKnown RBP7.12□□□□□ -1.27
YBX3-215ENST00000544504 TMEM183BQ1AE95 376 aa7.12□□□□□ -1.27
YBX3-215ENST00000544504 EBLN2Q6P2I7 272 aa7.12□□□□□ -1.27
YBX3-215ENST00000544504 GOLT1AQ6ZVE7 132 aa7.12□□□□□ -1.27
YBX3-215ENST00000544504 TMEM75Q8N9X5 138 aa7.12□□□□□ -1.27
YBX3-215ENST00000544504 C2CD4CQ8TF44 421 aa7.12□□□□□ -1.27
YBX3-215ENST00000544504 SMIM12Q96EX1 92 aa7.12□□□□□ -1.27
YBX3-215ENST00000544504 SEC11CQ9BY50 192 aa7.12□□□□□ -1.27
YBX3-215ENST00000544504 PARLQ9H300 379 aa7.12□□□□□ -1.27
YBX3-215ENST00000544504 KLF12Q9Y4X4 402 aa7.12□□□□□ -1.27
YBX3-215ENST00000544504 C9JCJ5 164 aa7.11□□□□□ -1.27
YBX3-215ENST00000544504 ZNF688P0C7X2 276 aa7.11□□□□□ -1.27
YBX3-215ENST00000544504 S100A1P23297 94 aa7.11□□□□□ -1.27
YBX3-215ENST00000544504 PNRC1Q12796 327 aaPredicted RBP7.11□□□□□ -1.27
YBX3-215ENST00000544504 DEFB121Q5J5C9 76 aa7.11□□□□□ -1.27
YBX3-215ENST00000544504 PSMG4Q5JS54 123 aa7.11□□□□□ -1.27
YBX3-215ENST00000544504 SAPCD1Q5SSQ6 148 aa7.11□□□□□ -1.27
YBX3-215ENST00000544504 TMEM78Q5T7P6 136 aa7.11□□□□□ -1.27
YBX3-215ENST00000544504 FOXI2Q6ZQN5 318 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms