RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 RBMXL1Q96E39 390 aaKnown RBP3.3□□□□□ -1.88
MDM2-228ENST00000542502 GNPNAT1Q96EK6 184 aaPredicted RBP3.3□□□□□ -1.88
MDM2-228ENST00000542502 AQP10Q96PS8 301 aa3.3□□□□□ -1.88
MDM2-228ENST00000542502 RNF2Q99496 336 aa3.3□□□□□ -1.88
MDM2-228ENST00000542502 FNDC4Q9H6D8 234 aaPredicted RBP3.3□□□□□ -1.88
MDM2-228ENST00000542502 CLEC5AQ9NY25 188 aa3.3□□□□□ -1.88
MDM2-228ENST00000542502 RABAC1Q9UI14 185 aa3.3□□□□□ -1.88
MDM2-228ENST00000542502 PUS1Q9Y606 427 aaKnown RBP eCLIP3.3□□□□□ -1.88
MDM2-228ENST00000542502 IGHV7-4-1A0A0J9YVY3 117 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 WI2-2373I1.2A0A1W2PRP0 233 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 OR4C46A6NHA9 309 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 SNURFLB1AK76 121 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 HYPMO75409 117 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 CCNKO75909 580 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 CST7O76096 145 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 SIX6O95475 246 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 IGKV1-17P01599 117 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 IGLV1-51P01701 117 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 IL4P05112 153 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 FOLR2P14207 255 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 CXCL3P19876 107 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 GALR1P47211 349 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 RPL29P47914 159 aaKnown RBP3.29□□□□□ -1.88
MDM2-228ENST00000542502 PLP1P60201 277 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 SERF2P84101 59 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 EWSR1Q01844 656 aaKnown RBP eCLIP3.29□□□□□ -1.88
MDM2-228ENST00000542502 EGFEM1PQ0D2K5 195 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 ZNF345Q14585 488 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 LRRC37A5PQ49AS3 106 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 KPRPQ5T749 579 aaPredicted RBP3.29□□□□□ -1.88
MDM2-228ENST00000542502 CYP2G1PQ6ZSU1 146 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 AKAP14Q86UN6 197 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 TCTE3Q8IZS6 198 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 OR11H7Q8NGC8 314 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 OR5C1Q8NGR4 320 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 GATAD1Q8WUU5 269 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 PPP1R14BQ96C90 147 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 HYLS1Q96M11 299 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 LINC00479Q96M42 142 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 ATP5SQ99766 215 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 SPAG8Q99932 426 aaPredicted RBP3.29□□□□□ -1.88
MDM2-228ENST00000542502 OPRPNQ99935 248 aaPredicted RBP3.29□□□□□ -1.88
MDM2-228ENST00000542502 CHRDL1Q9BU40 450 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 C20orf24Q9BUV8 137 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 RNF126Q9BV68 326 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 C11orf1Q9H5F2 150 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 MBD2Q9UBB5 411 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 SMPXQ9UHP9 88 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 ZNF256Q9Y2P7 627 aaPredicted RBP3.29□□□□□ -1.88
MDM2-228ENST00000542502 HSPB11Q9Y547 144 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 TIMM9Q9Y5J7 89 aa3.29□□□□□ -1.88
MDM2-228ENST00000542502 IGHV3-21A0A0B4J1V1 117 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 TMEM213A2RRL7 107 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 FAM24AA6NFZ4 105 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 AGPAT2O15120 278 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 HMGB3O15347 200 aaKnown RBP3.28□□□□□ -1.88
MDM2-228ENST00000542502 COX7A2P2O60397 106 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 TRBV12-3P01733 135 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 IGHV3-48P01763 117 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 IGHV3-23P01764 117 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 LINC00869P0C866 280 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 IGLL1P15814 213 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 RPL7P18124 248 aaKnown RBP3.28□□□□□ -1.88
MDM2-228ENST00000542502 ID1P41134 155 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 TAS2R45P59539 299 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 SNRPD3P62318 126 aaKnown RBP3.28□□□□□ -1.88
MDM2-228ENST00000542502 GUK1Q16774 197 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 DEFB114Q30KQ6 69 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 TIGITQ495A1 244 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 SPATA31B1PQ5VZV4 182 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 C19orf35Q6ZS72 473 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 BPIFA4PQ86YQ2 179 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 OR8I2Q8N0Y5 310 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 OR1B1Q8NGR6 318 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 ALKBH7Q9BT30 221 aaPredicted RBP3.28□□□□□ -1.88
MDM2-228ENST00000542502 PSMG3Q9BT73 122 aaPredicted RBP3.28□□□□□ -1.88
MDM2-228ENST00000542502 PBDC1Q9BVG4 233 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 RHPN1-AS1Q9BWJ2 59 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 MFFQ9GZY8 342 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 VSIRQ9H7M9 311 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 OR5AC2Q9NZP5 309 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 TNFSF18Q9UNG2 199 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 HIGD1AQ9Y241 93 aa3.28□□□□□ -1.88
MDM2-228ENST00000542502 IGKV1OR2-108A0A075B7D4 117 aa3.27□□□□□ -1.89
MDM2-228ENST00000542502 FXYD6-FXYD2A0A087WZ82 144 aa3.27□□□□□ -1.89
MDM2-228ENST00000542502 A0A0J9YWU9 116 aa3.27□□□□□ -1.89
MDM2-228ENST00000542502 UBE2L5PA0A1B0GUS4 154 aa3.27□□□□□ -1.89
MDM2-228ENST00000542502 KANTRA0A1W2PQU2 76 aa3.27□□□□□ -1.89
MDM2-228ENST00000542502 IGSF23A1L1A6 192 aa3.27□□□□□ -1.89
MDM2-228ENST00000542502 UMAD1C9J7I0 102 aa3.27□□□□□ -1.89
MDM2-228ENST00000542502 TEX46H3BTG2 121 aa3.27□□□□□ -1.89
MDM2-228ENST00000542502 DNASE2O00115 360 aaPredicted RBP3.27□□□□□ -1.89
MDM2-228ENST00000542502 ISLRO14498 428 aa3.27□□□□□ -1.89
MDM2-228ENST00000542502 CHEK1O14757 476 aa3.27□□□□□ -1.89
MDM2-228ENST00000542502 PFDN1O60925 122 aa3.27□□□□□ -1.89
MDM2-228ENST00000542502 C1QBP02746 253 aa3.27□□□□□ -1.89
MDM2-228ENST00000542502 OR5G3P0C626 314 aa3.27□□□□□ -1.89
MDM2-228ENST00000542502 GP9P14770 177 aa3.27□□□□□ -1.89
MDM2-228ENST00000542502 ORM2P19652 201 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms