RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 APELAP0DMC3 54 aa7.13□□□□□ -1.27
CHFR-220ENST00000541817 RNASE2P10153 161 aaKnown RBP7.13□□□□□ -1.27
CHFR-220ENST00000541817 MYOD1P15172 320 aa7.13□□□□□ -1.27
CHFR-220ENST00000541817 HIST1H2BOP23527 126 aa7.13□□□□□ -1.27
CHFR-220ENST00000541817 HIST1H2BBP33778 126 aa7.13□□□□□ -1.27
CHFR-220ENST00000541817 ATP5G3P48201 142 aa7.13□□□□□ -1.27
CHFR-220ENST00000541817 HIST1H2BDP58876 126 aa7.13□□□□□ -1.27
CHFR-220ENST00000541817 HIST1H2BCP62807 126 aa7.13□□□□□ -1.27
CHFR-220ENST00000541817 HIST2H2BEQ16778 126 aa7.13□□□□□ -1.27
CHFR-220ENST00000541817 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.13□□□□□ -1.27
CHFR-220ENST00000541817 FRZBQ92765 325 aa7.13□□□□□ -1.27
CHFR-220ENST00000541817 HIST1H2BHQ93079 126 aa7.13□□□□□ -1.27
CHFR-220ENST00000541817 IMMP2LQ96T52 175 aa7.13□□□□□ -1.27
CHFR-220ENST00000541817 HIST1H2BNQ99877 126 aa7.13□□□□□ -1.27
CHFR-220ENST00000541817 HIST1H2BMQ99879 126 aa7.13□□□□□ -1.27
CHFR-220ENST00000541817 NIT2Q9NQR4 276 aa7.13□□□□□ -1.27
CHFR-220ENST00000541817 FUT9Q9Y231 359 aa7.13□□□□□ -1.27
CHFR-220ENST00000541817 ARL2-SNX15V9GYD0 113 aa7.13□□□□□ -1.27
CHFR-220ENST00000541817 AGRNO00468 2067 aa7.12□□□□□ -1.27
CHFR-220ENST00000541817 SRRM4A7MD48 611 aaKnown RBP7.12□□□□□ -1.27
CHFR-220ENST00000541817 GGCTO75223 188 aaKnown RBP7.12□□□□□ -1.27
CHFR-220ENST00000541817 IGKV1-16P04430 117 aa7.12□□□□□ -1.27
CHFR-220ENST00000541817 LINC00869P0C866 280 aa7.12□□□□□ -1.27
CHFR-220ENST00000541817 DEFA4P12838 97 aa7.12□□□□□ -1.27
CHFR-220ENST00000541817 AREGP15514 252 aa7.12□□□□□ -1.27
CHFR-220ENST00000541817 NPPCP23582 126 aa7.12□□□□□ -1.27
CHFR-220ENST00000541817 OR10J1P30954 320 aa7.12□□□□□ -1.27
CHFR-220ENST00000541817 LGALS7P47929 136 aa7.12□□□□□ -1.27
CHFR-220ENST00000541817 FAM3BP58499 235 aaPredicted RBP7.12□□□□□ -1.27
CHFR-220ENST00000541817 MRGPRG-AS1Q2M3A8 158 aa7.12□□□□□ -1.27
CHFR-220ENST00000541817 FAM78BQ5VT40 261 aa7.12□□□□□ -1.27
CHFR-220ENST00000541817 PQLC2Q6ZP29 291 aa7.12□□□□□ -1.27
CHFR-220ENST00000541817 OR51G1Q8NGK1 321 aa7.12□□□□□ -1.27
CHFR-220ENST00000541817 MRPL32Q9BYC8 188 aaKnown RBP7.12□□□□□ -1.27
CHFR-220ENST00000541817 NDUFA4L2Q9NRX3 87 aa7.12□□□□□ -1.27
CHFR-220ENST00000541817 MYCBP2O75592 4640 aa7.12□□□□□ -1.27
CHFR-220ENST00000541817 DNAH5Q8TE73 4624 aa7.11□□□□□ -1.27
CHFR-220ENST00000541817 A0A1W2PPQ1 181 aa7.11□□□□□ -1.27
CHFR-220ENST00000541817 ACTL6BO94805 426 aa7.11□□□□□ -1.27
CHFR-220ENST00000541817 FABP1P07148 127 aa7.11□□□□□ -1.27
CHFR-220ENST00000541817 GAMTQ14353 236 aa7.11□□□□□ -1.27
CHFR-220ENST00000541817 FXYD3Q14802 87 aa7.11□□□□□ -1.27
CHFR-220ENST00000541817 C1orf134Q5TEV5 83 aa7.11□□□□□ -1.27
CHFR-220ENST00000541817 SPATA31B1PQ5VZV4 182 aa7.11□□□□□ -1.27
CHFR-220ENST00000541817 PVRIGQ6DKI7 326 aa7.11□□□□□ -1.27
CHFR-220ENST00000541817 ETFRF1Q6IPR1 90 aa7.11□□□□□ -1.27
CHFR-220ENST00000541817 Q6ZR54 194 aa7.11□□□□□ -1.27
CHFR-220ENST00000541817 LINC01551Q86U37 167 aa7.11□□□□□ -1.27
CHFR-220ENST00000541817 OR10G8Q8NGN5 311 aa7.11□□□□□ -1.27
CHFR-220ENST00000541817 OR1L4Q8NGR5 311 aa7.11□□□□□ -1.27
CHFR-220ENST00000541817 OR11H2Q8NH07 326 aa7.11□□□□□ -1.27
CHFR-220ENST00000541817 OR4X1Q8NH49 305 aa7.11□□□□□ -1.27
CHFR-220ENST00000541817 RNASEH2CQ8TDP1 164 aaKnown RBP7.11□□□□□ -1.27
CHFR-220ENST00000541817 CCDC140Q96MF4 163 aa7.11□□□□□ -1.27
CHFR-220ENST00000541817 OR51M1Q9H341 326 aa7.11□□□□□ -1.27
CHFR-220ENST00000541817 LY96Q9Y6Y9 160 aa7.11□□□□□ -1.27
CHFR-220ENST00000541817 TRAV9-1A0A075B6T8 112 aa7.1□□□□□ -1.27
CHFR-220ENST00000541817 SCO2A0A1W2PP80 73 aa7.1□□□□□ -1.27
CHFR-220ENST00000541817 TYMSP04818 313 aa7.1□□□□□ -1.27
CHFR-220ENST00000541817 OR5G3P0C626 314 aa7.1□□□□□ -1.27
CHFR-220ENST00000541817 C8orf88P0DMB2 117 aa7.1□□□□□ -1.27
CHFR-220ENST00000541817 CBLN1P23435 193 aa7.1□□□□□ -1.27
CHFR-220ENST00000541817 RPL19P84098 196 aaKnown RBP7.1□□□□□ -1.27
CHFR-220ENST00000541817 PSG5Q15238 335 aa7.1□□□□□ -1.27
CHFR-220ENST00000541817 ZNF562Q6V9R5 426 aa7.1□□□□□ -1.27
CHFR-220ENST00000541817 Q6ZTC4 211 aa7.1□□□□□ -1.27
CHFR-220ENST00000541817 MIR17HGQ75NE6 70 aa7.1□□□□□ -1.27
CHFR-220ENST00000541817 HIST3H2BBQ8N257 126 aa7.1□□□□□ -1.27
CHFR-220ENST00000541817 TEX45Q8NA69 505 aa7.1□□□□□ -1.27
CHFR-220ENST00000541817 OR10W1Q8NGF6 305 aa7.1□□□□□ -1.27
CHFR-220ENST00000541817 C11orf52Q96A22 123 aa7.1□□□□□ -1.27
CHFR-220ENST00000541817 ACY3Q96HD9 319 aa7.1□□□□□ -1.27
CHFR-220ENST00000541817 SFRP2Q96HF1 295 aa7.1□□□□□ -1.27
CHFR-220ENST00000541817 PFDN5Q99471 154 aa7.1□□□□□ -1.27
CHFR-220ENST00000541817 ZNF430Q9H8G1 570 aaPredicted RBP7.1□□□□□ -1.27
CHFR-220ENST00000541817 SEPSECSQ9HD40 501 aaKnown RBP7.1□□□□□ -1.27
CHFR-220ENST00000541817 YTHDF2Q9Y5A9 579 aaKnown RBP7.1□□□□□ -1.27
CHFR-220ENST00000541817 VPS13BQ7Z7G8 4022 aa7.1□□□□□ -1.27
CHFR-220ENST00000541817 SRRM2Q9UQ35 2752 aaKnown RBP7.1□□□□□ -1.27
CHFR-220ENST00000541817 ZNF320A2RRD8 509 aa7.09□□□□□ -1.27
CHFR-220ENST00000541817 HELTA6NFD8 242 aa7.09□□□□□ -1.27
CHFR-220ENST00000541817 C9JCJ5 164 aa7.09□□□□□ -1.27
CHFR-220ENST00000541817 H3BUA1 57 aa7.09□□□□□ -1.27
CHFR-220ENST00000541817 OR7C2O60412 319 aa7.09□□□□□ -1.27
CHFR-220ENST00000541817 P0DMU3 169 aa7.09□□□□□ -1.27
CHFR-220ENST00000541817 FAM231AP0DMU4 169 aa7.09□□□□□ -1.27
CHFR-220ENST00000541817 FAM231CP0DMU5 169 aa7.09□□□□□ -1.27
CHFR-220ENST00000541817 HLA-DMBP28068 263 aa7.09□□□□□ -1.27
CHFR-220ENST00000541817 SELENOTP62341 195 aa7.09□□□□□ -1.27
CHFR-220ENST00000541817 SSBP2P81877 361 aaPredicted RBP7.09□□□□□ -1.27
CHFR-220ENST00000541817 ZNF124Q15973 351 aa7.09□□□□□ -1.27
CHFR-220ENST00000541817 TMEM183AQ8IXX5 376 aa7.09□□□□□ -1.27
CHFR-220ENST00000541817 MMD2Q8IY49 270 aa7.09□□□□□ -1.27
CHFR-220ENST00000541817 OR10D4PQ8NGN7 298 aa7.09□□□□□ -1.27
CHFR-220ENST00000541817 OR1P1Q8NH06 330 aa7.09□□□□□ -1.27
CHFR-220ENST00000541817 CHRDL1Q9BU40 450 aa7.09□□□□□ -1.27
CHFR-220ENST00000541817 C11orf68Q9H3H3 251 aaKnown RBP7.09□□□□□ -1.27
CHFR-220ENST00000541817 MAP6D1Q9H9H5 199 aa7.09□□□□□ -1.27
CHFR-220ENST00000541817 DNAJC4Q9NNZ3 241 aa7.09□□□□□ -1.27
CHFR-220ENST00000541817 KIR2DL5BA0A0G2JN68 375 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms