RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 LOC102724200A0A096LPH7 203 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 LOC102723971A0A1B0GUV8 181 aa8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 LGALS9O00182 355 aa8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 MRPS12O15235 138 aaKnown RBP8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 CD5P06127 495 aa8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 SNRPCP09234 159 aaKnown RBP8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 NBEAP1P0C6P0 100 aa8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 HIST1H1EP10412 219 aaKnown RBP8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 TCTAP57738 103 aa8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 UBE2G2P60604 165 aa8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 UBE2L3P68036 154 aaKnown RBP8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 ICAM4Q14773 271 aa8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 GUCA2BQ16661 112 aa8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 ZNF506Q5JVG8 444 aa8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 C1orf194Q5T5A4 169 aa8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 OR8I2Q8N0Y5 310 aa8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 EIF4E3Q8N5X7 224 aaKnown RBP8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 RXFP4Q8TDU9 374 aa8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 NARS2Q96I59 477 aaKnown RBP8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 TMEM231Q9H6L2 316 aa8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 TREM1Q9NP99 234 aa8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 MANBALQ9NQG1 85 aa8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 SMPXQ9UHP9 88 aa8.36□□□□□ -1.07
TRAPPC4-213ENST00000533149 IGHV7-4-1A0A0J9YVY3 117 aa8.35□□□□□ -1.07
TRAPPC4-213ENST00000533149 A0A1W2PS18 150 aa8.35□□□□□ -1.07
TRAPPC4-213ENST00000533149 C9JQL5 133 aa8.35□□□□□ -1.07
TRAPPC4-213ENST00000533149 H3BQ15 152 aa8.35□□□□□ -1.07
TRAPPC4-213ENST00000533149 SPRY2O43597 315 aa8.35□□□□□ -1.07
TRAPPC4-213ENST00000533149 BCL2P10415 239 aa8.35□□□□□ -1.07
TRAPPC4-213ENST00000533149 RPL7P18124 248 aaKnown RBP8.35□□□□□ -1.07
TRAPPC4-213ENST00000533149 UQCC3Q6UW78 93 aa8.35□□□□□ -1.07
TRAPPC4-213ENST00000533149 C16orf54Q6UWD8 224 aa8.35□□□□□ -1.07
TRAPPC4-213ENST00000533149 BLNKQ8WV28 456 aa8.35□□□□□ -1.07
TRAPPC4-213ENST00000533149 DAZ1Q9NQZ3 744 aaKnown RBP8.35□□□□□ -1.07
TRAPPC4-213ENST00000533149 ZNF586Q9NXT0 402 aa8.35□□□□□ -1.07
TRAPPC4-213ENST00000533149 VAX2Q9UIW0 290 aa8.35□□□□□ -1.07
TRAPPC4-213ENST00000533149 YTHDF2Q9Y5A9 579 aaKnown RBP8.35□□□□□ -1.07
TRAPPC4-213ENST00000533149 H3BTX0 84 aa8.34□□□□□ -1.07
TRAPPC4-213ENST00000533149 IGLC2P0DOY2 106 aa8.34□□□□□ -1.07
TRAPPC4-213ENST00000533149 EDN2P20800 178 aa8.34□□□□□ -1.07
TRAPPC4-213ENST00000533149 TAGLN2P37802 199 aaKnown RBP8.34□□□□□ -1.07
TRAPPC4-213ENST00000533149 CST9LP1Q5W188 147 aa8.34□□□□□ -1.07
TRAPPC4-213ENST00000533149 Q6ZWC4 215 aa8.34□□□□□ -1.07
TRAPPC4-213ENST00000533149 DYNLRB2Q8TF09 96 aa8.34□□□□□ -1.07
TRAPPC4-213ENST00000533149 GRAMD2BQ96HH9 432 aa8.34□□□□□ -1.07
TRAPPC4-213ENST00000533149 C17orf77Q96MU5 243 aa8.34□□□□□ -1.07
TRAPPC4-213ENST00000533149 RHPN1-AS1Q9BWJ2 59 aa8.34□□□□□ -1.07
TRAPPC4-213ENST00000533149 A0A1W2PRE2 83 aa8.33□□□□□ -1.08
TRAPPC4-213ENST00000533149 TMEM213A2RRL7 107 aa8.33□□□□□ -1.08
TRAPPC4-213ENST00000533149 FAM74A7A6NL05 159 aa8.33□□□□□ -1.08
TRAPPC4-213ENST00000533149 A8MWP6 167 aa8.33□□□□□ -1.08
TRAPPC4-213ENST00000533149 CHEK1O14757 476 aa8.33□□□□□ -1.08
TRAPPC4-213ENST00000533149 SRP19P09132 144 aaKnown RBP8.33□□□□□ -1.08
TRAPPC4-213ENST00000533149 GALR1P47211 349 aa8.33□□□□□ -1.08
TRAPPC4-213ENST00000533149 RANP62826 216 aaKnown RBP8.33□□□□□ -1.08
TRAPPC4-213ENST00000533149 DEFB114Q30KQ6 69 aa8.33□□□□□ -1.08
TRAPPC4-213ENST00000533149 GLMPQ8WWB7 406 aa8.33□□□□□ -1.08
TRAPPC4-213ENST00000533149 RNF183Q96D59 192 aa8.33□□□□□ -1.08
TRAPPC4-213ENST00000533149 GPR82Q96P67 336 aa8.33□□□□□ -1.08
TRAPPC4-213ENST00000533149 SMDT1Q9H4I9 107 aa8.33□□□□□ -1.08
TRAPPC4-213ENST00000533149 TRBV19A0A075B6N1 114 aa8.32□□□□□ -1.08
TRAPPC4-213ENST00000533149 TMEM218A2RU14 115 aa8.32□□□□□ -1.08
TRAPPC4-213ENST00000533149 PRSS29PA6NIE9 313 aa8.32□□□□□ -1.08
TRAPPC4-213ENST00000533149 C2orf70A6NJV1 201 aa8.32□□□□□ -1.08
TRAPPC4-213ENST00000533149 C11orf94C9JXX5 98 aa8.32□□□□□ -1.08
TRAPPC4-213ENST00000533149 NDUFB4O95168 129 aa8.32□□□□□ -1.08
TRAPPC4-213ENST00000533149 CBLN1P23435 193 aa8.32□□□□□ -1.08
TRAPPC4-213ENST00000533149 ATP5G3P48201 142 aa8.32□□□□□ -1.08
TRAPPC4-213ENST00000533149 APOC4P55056 127 aa8.32□□□□□ -1.08
TRAPPC4-213ENST00000533149 SUMO1P63165 101 aaKnown RBP8.32□□□□□ -1.08
TRAPPC4-213ENST00000533149 MEF2BQ02080 365 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC4-213ENST00000533149 SLC35B3Q9H1N7 401 aa8.32□□□□□ -1.08
TRAPPC4-213ENST00000533149 ARL2-SNX15V9GYD0 113 aa8.32□□□□□ -1.08
TRAPPC4-213ENST00000533149 A0A087X0K7 114 aa8.31□□□□□ -1.08
TRAPPC4-213ENST00000533149 PGPA6NDG6 321 aa8.31□□□□□ -1.08
TRAPPC4-213ENST00000533149 UBE2CO00762 179 aa8.31□□□□□ -1.08
TRAPPC4-213ENST00000533149 ATP6V1G1O75348 118 aa8.31□□□□□ -1.08
TRAPPC4-213ENST00000533149 FOLR2P14207 255 aa8.31□□□□□ -1.08
TRAPPC4-213ENST00000533149 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.31□□□□□ -1.08
TRAPPC4-213ENST00000533149 SIGLEC15Q6ZMC9 328 aa8.31□□□□□ -1.08
TRAPPC4-213ENST00000533149 C2CD4CQ8TF44 421 aa8.31□□□□□ -1.08
TRAPPC4-213ENST00000533149 TXNDC17Q9BRA2 123 aa8.31□□□□□ -1.08
TRAPPC4-213ENST00000533149 SELENOKQ9Y6D0 94 aa8.31□□□□□ -1.08
TRAPPC4-213ENST00000533149 TCF24Q7RTU0 167 aa8.3□□□□□ -1.08
TRAPPC4-213ENST00000533149 CCDC28AQ8IWP9 274 aa8.3□□□□□ -1.08
TRAPPC4-213ENST00000533149 NKX6-2Q9C056 277 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC4-213ENST00000533149 Q9H3A6 140 aa8.3□□□□□ -1.08
TRAPPC4-213ENST00000533149 OTORQ9NRC9 128 aa8.3□□□□□ -1.08
TRAPPC4-213ENST00000533149 HELTA6NFD8 242 aa8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 GGTLC3B5MD39 225 aa8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 F6UZH7 168 aa8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 SLC17A3O00476 420 aa8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 PDE6DO43924 150 aa8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 NDUFS6O75380 124 aaKnown RBP8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 SFTA3P0C7M3 94 aa8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 CEBPGP53567 150 aa8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 RPL11P62913 178 aaKnown RBP8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 PSG9Q00887 426 aa8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 PDE6HQ13956 83 aa8.29□□□□□ -1.08
TRAPPC4-213ENST00000533149 DEFB135Q30KP9 77 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 475.5 ms