RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 UQCC1Q9NVA1 299 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 C21orf62Q9NYP8 219 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 TNFSF18Q9UNG2 199 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 HSPB11Q9Y547 144 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 TSSC4Q9Y5U2 329 aaPredicted RBP3.37□□□□□ -1.87
USP48-211ENST00000526044 URGCP-MRPS24S4R325 110 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 S4R3C0 116 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 CUBNO60494 3623 aa3.37□□□□□ -1.87
USP48-211ENST00000526044 TLN2Q9Y4G6 2542 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 BORCS7-ASMTA0A0B4J1R7 106 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 IGKV3D-20A0A0C4DH25 116 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 KANTRA0A1W2PQU2 76 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 OR2T8A6NH00 312 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 ZFP92A6NM28 416 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 FNDC10F2Z333 226 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 NUPL2O15504 423 aaKnown RBP3.36□□□□□ -1.87
USP48-211ENST00000526044 GNG7O60262 68 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 GGCTO75223 188 aaKnown RBP3.36□□□□□ -1.87
USP48-211ENST00000526044 CA1P00915 261 aaPredicted RBP3.36□□□□□ -1.87
USP48-211ENST00000526044 IFNA5P01569 189 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 CTSGP08311 255 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 LGALS1P09382 135 aaKnown RBP3.36□□□□□ -1.87
USP48-211ENST00000526044 EIF2B2P49770 351 aaKnown RBP3.36□□□□□ -1.87
USP48-211ENST00000526044 RND2P52198 227 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 DEFA5Q01523 94 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 AKR1C1Q04828 323 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 RAB31Q13636 194 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 KLF5Q13887 457 aaPredicted RBP3.36□□□□□ -1.87
USP48-211ENST00000526044 CLINT1Q14677 625 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 NSUN5P1Q3KNT7 163 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 LGALSLQ3ZCW2 172 aaPredicted RBP3.36□□□□□ -1.87
USP48-211ENST00000526044 TMUB2Q71RG4 321 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 SLC16A13Q7RTY0 426 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 TMEM144Q7Z5S9 345 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 GTSCR1Q86UQ5 136 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 NDUFA11Q86Y39 141 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 KCNRGQ8N5I3 272 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 ZNF709Q8N972 641 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 KLHL30-AS1Q8NEE0 82 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 OR11H1Q8NG94 326 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 OR1B1Q8NGR6 318 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 OR1N2Q8NGR9 330 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 MYOZ3Q8TDC0 251 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 Q8WTZ3 238 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 VGLL1Q99990 258 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 TMEM147Q9BVK8 224 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 SMIM3Q9BZL3 60 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 GNB4Q9HAV0 340 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 SIGLEC8Q9NYZ4 499 aa3.36□□□□□ -1.87
USP48-211ENST00000526044 MRPL36Q9P0J6 103 aaKnown RBP3.36□□□□□ -1.87
USP48-211ENST00000526044 PPP5D1E7EU14 171 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 LINC01619G3V211 115 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 I3L521 148 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 TGOLN2O43493 480 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 MPDU1O75352 247 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 YIF1AO95070 293 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 TSPAN13O95857 204 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 FABP1P07148 127 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 CXCL2P19875 107 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 C4BPBP20851 252 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 ZP3P21754 424 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 OR10J1P30954 320 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 GPR183P32249 361 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 MYCNOSP40205 109 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 YPEL3P61236 119 aaPredicted RBP3.35□□□□□ -1.87
USP48-211ENST00000526044 SELENOTP62341 195 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 RUNX1Q01196 453 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 ZNF616Q08AN1 781 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 ZNF266Q14584 549 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 ZNF345Q14585 488 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 RPEL1Q2QD12 228 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 TIGITQ495A1 244 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 FAM106AQ4KMX7 169 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 C5orf47Q569G3 176 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 SOHLH1Q5JUK2 328 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 GPHB5Q86YW7 130 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 C4orf3Q8WVX3 66 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 TRGV9Q99603 122 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 ATP5SQ99766 215 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 MAP1LC3CQ9BXW4 147 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 WDR61Q9GZS3 305 aaKnown RBP3.35□□□□□ -1.87
USP48-211ENST00000526044 ARL6Q9H0F7 186 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 WFDC1Q9HC57 220 aa3.35□□□□□ -1.87
USP48-211ENST00000526044 IGKV1D-37A0A075B6S9 117 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 IGKV1OR2-108A0A075B7D4 117 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 IGHV3-35A0A0C4DH35 117 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 UBE2L5PA0A1B0GUS4 154 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 C17orf112F2Z3M2 114 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 AGPAT2O15120 278 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 CFDP00746 253 aaPredicted RBP3.34□□□□□ -1.87
USP48-211ENST00000526044 IGKV1-17P01599 117 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 TRBV12-3P01733 135 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 IGLC1P0CG04 106 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 PMCHP20382 165 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 FGF7P21781 194 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 RPL29P47914 159 aaKnown RBP3.34□□□□□ -1.87
USP48-211ENST00000526044 NKX2-5P52952 324 aaPredicted RBP3.34□□□□□ -1.87
USP48-211ENST00000526044 EIF5AP63241 154 aaKnown RBP3.34□□□□□ -1.87
USP48-211ENST00000526044 ZNF90Q03938 601 aa3.34□□□□□ -1.87
USP48-211ENST00000526044 OPCMLQ14982 345 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms