RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 GPR61Q9BZJ8 451 aa6.74□□□□□ -1.33
CSMD1-208ENST00000520561 SLC35B3Q9H1N7 401 aa6.74□□□□□ -1.33
CSMD1-208ENST00000520561 EPDR1Q9UM22 224 aa6.74□□□□□ -1.33
CSMD1-208ENST00000520561 ATRQ13535 2644 aa6.73□□□□□ -1.33
CSMD1-208ENST00000520561 TRAV8-2A0A0B4J237 113 aa6.73□□□□□ -1.33
CSMD1-208ENST00000520561 K7EQG2 157 aa6.73□□□□□ -1.33
CSMD1-208ENST00000520561 M0R3E3 92 aa6.73□□□□□ -1.33
CSMD1-208ENST00000520561 TCRAP04437 139 aa6.73□□□□□ -1.33
CSMD1-208ENST00000520561 SFTA3P0C7M3 94 aa6.73□□□□□ -1.33
CSMD1-208ENST00000520561 HLA-DMBP28068 263 aa6.73□□□□□ -1.33
CSMD1-208ENST00000520561 PSG3Q16557 428 aa6.73□□□□□ -1.33
CSMD1-208ENST00000520561 IGFL4Q6B9Z1 124 aa6.73□□□□□ -1.33
CSMD1-208ENST00000520561 ARL6IP6Q8N6S5 226 aa6.73□□□□□ -1.33
CSMD1-208ENST00000520561 CYB561D1Q8N8Q1 229 aa6.73□□□□□ -1.33
CSMD1-208ENST00000520561 DCANP1Q8TF63 244 aa6.73□□□□□ -1.33
CSMD1-208ENST00000520561 LINC00052Q96N35 136 aa6.73□□□□□ -1.33
CSMD1-208ENST00000520561 NF1P21359 2839 aa6.73□□□□□ -1.33
CSMD1-208ENST00000520561 TMEM218A2RU14 115 aa6.72□□□□□ -1.33
CSMD1-208ENST00000520561 DIRC3C9JPN6 131 aa6.72□□□□□ -1.33
CSMD1-208ENST00000520561 C9JQL5 133 aa6.72□□□□□ -1.33
CSMD1-208ENST00000520561 ZNF688P0C7X2 276 aa6.72□□□□□ -1.33
CSMD1-208ENST00000520561 UBE2G1P62253 170 aa6.72□□□□□ -1.33
CSMD1-208ENST00000520561 ZNF674Q2M3X9 581 aa6.72□□□□□ -1.33
CSMD1-208ENST00000520561 PSMG4Q5JS54 123 aa6.72□□□□□ -1.33
CSMD1-208ENST00000520561 SOHLH1Q5JUK2 328 aa6.72□□□□□ -1.33
CSMD1-208ENST00000520561 GOLT1AQ6ZVE7 132 aa6.72□□□□□ -1.33
CSMD1-208ENST00000520561 WFDC9Q8NEX5 89 aa6.72□□□□□ -1.33
CSMD1-208ENST00000520561 MDFIQ99750 246 aa6.72□□□□□ -1.33
CSMD1-208ENST00000520561 PARLQ9H300 379 aa6.72□□□□□ -1.33
CSMD1-208ENST00000520561 IGKV2-40A0A087WW87 121 aaPredicted RBP6.71□□□□□ -1.34
CSMD1-208ENST00000520561 IZUMO1RA6ND01 250 aa6.71□□□□□ -1.34
CSMD1-208ENST00000520561 FBLL1A6NHQ2 334 aaKnown RBP6.71□□□□□ -1.34
CSMD1-208ENST00000520561 ZNF727A8MUV8 499 aa6.71□□□□□ -1.34
CSMD1-208ENST00000520561 KRBOX1C9JBD0 128 aa6.71□□□□□ -1.34
CSMD1-208ENST00000520561 F8W036 122 aa6.71□□□□□ -1.34
CSMD1-208ENST00000520561 IGKV2D-40P01614 121 aaPredicted RBP6.71□□□□□ -1.34
CSMD1-208ENST00000520561 S100A9P06702 114 aaKnown RBP6.71□□□□□ -1.34
CSMD1-208ENST00000520561 PRR31Q5SQ13 230 aa6.71□□□□□ -1.34
CSMD1-208ENST00000520561 FAM24BQ8N5W8 94 aa6.71□□□□□ -1.34
CSMD1-208ENST00000520561 TMEM75Q8N9X5 138 aa6.71□□□□□ -1.34
CSMD1-208ENST00000520561 OR10J6PQ8NGY7 276 aa6.71□□□□□ -1.34
CSMD1-208ENST00000520561 SPATA3Q8NHX4 192 aa6.71□□□□□ -1.34
CSMD1-208ENST00000520561 C2CD4CQ8TF44 421 aa6.71□□□□□ -1.34
CSMD1-208ENST00000520561 FMC1Q96HJ9 113 aa6.71□□□□□ -1.34
CSMD1-208ENST00000520561 C20orf173Q96LM9 149 aa6.71□□□□□ -1.34
CSMD1-208ENST00000520561 SMIM7Q9BQ49 75 aa6.71□□□□□ -1.34
CSMD1-208ENST00000520561 RBAKDNA6NC62 111 aa6.7□□□□□ -1.34
CSMD1-208ENST00000520561 ZNF705FA8MVS1 300 aaPredicted RBP6.7□□□□□ -1.34
CSMD1-208ENST00000520561 ATP6V1G1O75348 118 aa6.7□□□□□ -1.34
CSMD1-208ENST00000520561 IGLL1P15814 213 aa6.7□□□□□ -1.34
CSMD1-208ENST00000520561 RPL35P42766 123 aaKnown RBP6.7□□□□□ -1.34
CSMD1-208ENST00000520561 CMC4P56277 68 aaPredicted RBP6.7□□□□□ -1.34
CSMD1-208ENST00000520561 TAS2R60P59551 318 aa6.7□□□□□ -1.34
CSMD1-208ENST00000520561 DEFB131AP59861 70 aa6.7□□□□□ -1.34
CSMD1-208ENST00000520561 TMEM183BQ1AE95 376 aa6.7□□□□□ -1.34
CSMD1-208ENST00000520561 FAM74A3Q4VXF1 159 aa6.7□□□□□ -1.34
CSMD1-208ENST00000520561 EBLN2Q6P2I7 272 aa6.7□□□□□ -1.34
CSMD1-208ENST00000520561 Q86TA4 180 aa6.7□□□□□ -1.34
CSMD1-208ENST00000520561 NDFIP1Q9BT67 221 aa6.7□□□□□ -1.34
CSMD1-208ENST00000520561 DERL1Q9BUN8 251 aa6.7□□□□□ -1.34
CSMD1-208ENST00000520561 SEC11CQ9BY50 192 aa6.7□□□□□ -1.34
CSMD1-208ENST00000520561 MAP6D1Q9H9H5 199 aa6.7□□□□□ -1.34
CSMD1-208ENST00000520561 WNK1Q9H4A3 2382 aa6.7□□□□□ -1.34
CSMD1-208ENST00000520561 NIPBLQ6KC79 2804 aaeCLIP6.7□□□□□ -1.34
CSMD1-208ENST00000520561 TRAV34A0A0B4J273 112 aa6.69□□□□□ -1.34
CSMD1-208ENST00000520561 OR11H12B2RN74 326 aa6.69□□□□□ -1.34
CSMD1-208ENST00000520561 C9JCJ5 164 aa6.69□□□□□ -1.34
CSMD1-208ENST00000520561 PRAC2D3DTV9 90 aa6.69□□□□□ -1.34
CSMD1-208ENST00000520561 ADCYAP1P18509 176 aa6.69□□□□□ -1.34
CSMD1-208ENST00000520561 GNG4P50150 75 aa6.69□□□□□ -1.34
CSMD1-208ENST00000520561 FLI1Q01543 452 aaPredicted RBP6.69□□□□□ -1.34
CSMD1-208ENST00000520561 HIST1H1AQ02539 215 aaPredicted RBP6.69□□□□□ -1.34
CSMD1-208ENST00000520561 CENPWQ5EE01 88 aa6.69□□□□□ -1.34
CSMD1-208ENST00000520561 TMEM78Q5T7P6 136 aa6.69□□□□□ -1.34
CSMD1-208ENST00000520561 FOXI2Q6ZQN5 318 aa6.69□□□□□ -1.34
CSMD1-208ENST00000520561 GTSCR1Q86UQ5 136 aa6.69□□□□□ -1.34
CSMD1-208ENST00000520561 OR8A1Q8NGG7 326 aa6.69□□□□□ -1.34
CSMD1-208ENST00000520561 NIPSNAP3BQ9BS92 247 aa6.69□□□□□ -1.34
CSMD1-208ENST00000520561 NAT8Q9UHE5 227 aa6.69□□□□□ -1.34
CSMD1-208ENST00000520561 PSG8Q9UQ74 426 aa6.69□□□□□ -1.34
CSMD1-208ENST00000520561 ZNF256Q9Y2P7 627 aaPredicted RBP6.69□□□□□ -1.34
CSMD1-208ENST00000520561 TRAV8-1A0A0A6YYK1 113 aa6.68□□□□□ -1.34
CSMD1-208ENST00000520561 TRBV6-1A0A0K0K1D8 114 aa6.68□□□□□ -1.34
CSMD1-208ENST00000520561 NPIPB6E9PJ23 425 aa6.68□□□□□ -1.34
CSMD1-208ENST00000520561 WIPF1O43516 503 aa6.68□□□□□ -1.34
CSMD1-208ENST00000520561 DUSP14O95147 198 aaKnown RBP6.68□□□□□ -1.34
CSMD1-208ENST00000520561 PRB4P10163 310 aaPredicted RBP6.68□□□□□ -1.34
CSMD1-208ENST00000520561 BEAN1Q3B7T3 259 aa6.68□□□□□ -1.34
CSMD1-208ENST00000520561 ODF3L2Q3SX64 289 aa6.68□□□□□ -1.34
CSMD1-208ENST00000520561 PRNTQ86SH4 94 aa6.68□□□□□ -1.34
CSMD1-208ENST00000520561 SMIM12Q96EX1 92 aa6.68□□□□□ -1.34
CSMD1-208ENST00000520561 LINC00479Q96M42 142 aa6.68□□□□□ -1.34
CSMD1-208ENST00000520561 SAV1Q9H4B6 383 aaPredicted RBP6.68□□□□□ -1.34
CSMD1-208ENST00000520561 ZMAT5Q9UDW3 170 aaKnown RBP6.68□□□□□ -1.34
CSMD1-208ENST00000520561 CARHSP1Q9Y2V2 147 aaKnown RBP6.68□□□□□ -1.34
CSMD1-208ENST00000520561 KLF12Q9Y4X4 402 aa6.68□□□□□ -1.34
CSMD1-208ENST00000520561 F6UB75 175 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 LTAP01374 205 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 HLA-DRB4P13762 266 aa6.67□□□□□ -1.34
CSMD1-208ENST00000520561 S100A1P23297 94 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms