RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 Q8N814 137 aa8.45□□□□□ -1.06
DDX41-215ENST00000512431 ZNF431Q8TF32 576 aaPredicted RBP8.45□□□□□ -1.06
DDX41-215ENST00000512431 TRAV5A0A0B4J249 113 aa8.44□□□□□ -1.06
DDX41-215ENST00000512431 PRSS46E5RG02 174 aa8.44□□□□□ -1.06
DDX41-215ENST00000512431 WRBO00258 174 aa8.44□□□□□ -1.06
DDX41-215ENST00000512431 SPINK4O60575 86 aa8.44□□□□□ -1.06
DDX41-215ENST00000512431 SRIP30626 198 aa8.44□□□□□ -1.06
DDX41-215ENST00000512431 PLP1P60201 277 aa8.44□□□□□ -1.06
DDX41-215ENST00000512431 SPANXN5Q5MJ07 72 aa8.44□□□□□ -1.06
DDX41-215ENST00000512431 OR51S1Q8NGJ8 323 aa8.44□□□□□ -1.06
DDX41-215ENST00000512431 PCNPQ8WW12 178 aaKnown RBP8.44□□□□□ -1.06
DDX41-215ENST00000512431 C8orf49Q96NF6 230 aa8.44□□□□□ -1.06
DDX41-215ENST00000512431 ODF3Q96PU9 254 aa8.44□□□□□ -1.06
DDX41-215ENST00000512431 ARL6Q9H0F7 186 aa8.44□□□□□ -1.06
DDX41-215ENST00000512431 DUXBA0A1W2PPF3 345 aa8.43□□□□□ -1.06
DDX41-215ENST00000512431 PRAC2D3DTV9 90 aa8.43□□□□□ -1.06
DDX41-215ENST00000512431 SYNGR2O43760 224 aa8.43□□□□□ -1.06
DDX41-215ENST00000512431 PITX3O75364 302 aa8.43□□□□□ -1.06
DDX41-215ENST00000512431 SLC25A5P05141 298 aaKnown RBP8.43□□□□□ -1.06
DDX41-215ENST00000512431 CT45A10P0DMU9 189 aa8.43□□□□□ -1.06
DDX41-215ENST00000512431 VBP1P61758 197 aa8.43□□□□□ -1.06
DDX41-215ENST00000512431 MRPS10P82664 201 aaKnown RBP8.43□□□□□ -1.06
DDX41-215ENST00000512431 CLVS1Q8IUQ0 354 aaPredicted RBP8.43□□□□□ -1.06
DDX41-215ENST00000512431 EIF4E3Q8N5X7 224 aaKnown RBP8.43□□□□□ -1.06
DDX41-215ENST00000512431 C11orf72Q8NBR9 251 aa8.43□□□□□ -1.06
DDX41-215ENST00000512431 SCP2D1Q9UJQ7 156 aa8.43□□□□□ -1.06
DDX41-215ENST00000512431 RCL1Q9Y2P8 373 aaKnown RBP8.43□□□□□ -1.06
DDX41-215ENST00000512431 STRAPQ9Y3F4 350 aaKnown RBP8.43□□□□□ -1.06
DDX41-215ENST00000512431 KLF12Q9Y4X4 402 aa8.43□□□□□ -1.06
DDX41-215ENST00000512431 TRGV4A0A0C4DH28 118 aa8.42□□□□□ -1.06
DDX41-215ENST00000512431 E5RGE8 158 aa8.42□□□□□ -1.06
DDX41-215ENST00000512431 SNRPCP09234 159 aaKnown RBP8.42□□□□□ -1.06
DDX41-215ENST00000512431 TCL1AP56279 114 aa8.42□□□□□ -1.06
DDX41-215ENST00000512431 ZNF415Q09FC8 603 aa8.42□□□□□ -1.06
DDX41-215ENST00000512431 ANXA2RQ3ZCQ2 193 aa8.42□□□□□ -1.06
DDX41-215ENST00000512431 TEPPQ6URK8 271 aa8.42□□□□□ -1.06
DDX41-215ENST00000512431 BPIFA4PQ86YQ2 179 aa8.42□□□□□ -1.06
DDX41-215ENST00000512431 LRTM2Q8N967 370 aa8.42□□□□□ -1.06
DDX41-215ENST00000512431 VGLL1Q99990 258 aa8.42□□□□□ -1.06
DDX41-215ENST00000512431 MRPL32Q9BYC8 188 aaKnown RBP8.42□□□□□ -1.06
DDX41-215ENST00000512431 RBM38Q9H0Z9 239 aaKnown RBP8.42□□□□□ -1.06
DDX41-215ENST00000512431 ARV1Q9H2C2 271 aa8.42□□□□□ -1.06
DDX41-215ENST00000512431 PXMP4Q9Y6I8 212 aa8.42□□□□□ -1.06
DDX41-215ENST00000512431 C7orf71A4D174 169 aa8.41□□□□□ -1.06
DDX41-215ENST00000512431 H3BP45 60 aa8.41□□□□□ -1.06
DDX41-215ENST00000512431 K7EQD1 137 aa8.41□□□□□ -1.06
DDX41-215ENST00000512431 MRPS12O15235 138 aaKnown RBP8.41□□□□□ -1.06
DDX41-215ENST00000512431 SLC25A6P12236 298 aa8.41□□□□□ -1.06
DDX41-215ENST00000512431 FHL2Q14192 279 aa8.41□□□□□ -1.06
DDX41-215ENST00000512431 SPCS2Q15005 226 aa8.41□□□□□ -1.06
DDX41-215ENST00000512431 IBA57Q5T440 356 aaKnown RBP8.41□□□□□ -1.06
DDX41-215ENST00000512431 PXDC1Q5TGL8 231 aa8.41□□□□□ -1.06
DDX41-215ENST00000512431 MRPL16Q9NX20 251 aaKnown RBP8.41□□□□□ -1.06
DDX41-215ENST00000512431 LINC00854A0A1B0GVQ3 168 aa8.4□□□□□ -1.06
DDX41-215ENST00000512431 ORM1P02763 201 aa8.4□□□□□ -1.06
DDX41-215ENST00000512431 PATE2Q6UY27 113 aa8.4□□□□□ -1.06
DDX41-215ENST00000512431 Q6ZSA8 131 aa8.4□□□□□ -1.06
DDX41-215ENST00000512431 LINC00305Q7Z4B0 112 aa8.4□□□□□ -1.06
DDX41-215ENST00000512431 TXNDC17Q9BRA2 123 aa8.4□□□□□ -1.06
DDX41-215ENST00000512431 IGHV3-38A0A0C4DH36 116 aa8.39□□□□□ -1.07
DDX41-215ENST00000512431 H3BMQ9 156 aa8.39□□□□□ -1.07
DDX41-215ENST00000512431 H3BTX0 84 aa8.39□□□□□ -1.07
DDX41-215ENST00000512431 RGS13O14921 159 aa8.39□□□□□ -1.07
DDX41-215ENST00000512431 MPDU1O75352 247 aa8.39□□□□□ -1.07
DDX41-215ENST00000512431 GYPEP15421 78 aa8.39□□□□□ -1.07
DDX41-215ENST00000512431 C4orf46Q504U0 113 aa8.39□□□□□ -1.07
DDX41-215ENST00000512431 ARPC5LQ9BPX5 153 aa8.39□□□□□ -1.07
DDX41-215ENST00000512431 Q9HAA7 133 aa8.39□□□□□ -1.07
DDX41-215ENST00000512431 NPVFQ9HCQ7 196 aa8.39□□□□□ -1.07
DDX41-215ENST00000512431 MCUBQ9NWR8 336 aa8.39□□□□□ -1.07
DDX41-215ENST00000512431 BOLA1Q9Y3E2 137 aa8.39□□□□□ -1.07
DDX41-215ENST00000512431 SLC17A3O00476 420 aa8.38□□□□□ -1.07
DDX41-215ENST00000512431 GOSR2O14653 212 aa8.38□□□□□ -1.07
DDX41-215ENST00000512431 RGS5O15539 181 aa8.38□□□□□ -1.07
DDX41-215ENST00000512431 RNASE4P34096 147 aaKnown RBP8.38□□□□□ -1.07
DDX41-215ENST00000512431 BTN1A1Q13410 526 aa8.38□□□□□ -1.07
DDX41-215ENST00000512431 GUK1Q16774 197 aa8.38□□□□□ -1.07
DDX41-215ENST00000512431 SMIM4Q8WVI0 70 aa8.38□□□□□ -1.07
DDX41-215ENST00000512431 IBA57-AS1B1ANH7 110 aa8.37□□□□□ -1.07
DDX41-215ENST00000512431 C9JCJ5 164 aa8.37□□□□□ -1.07
DDX41-215ENST00000512431 COX7A2P2O60397 106 aa8.37□□□□□ -1.07
DDX41-215ENST00000512431 GPX1P07203 203 aa8.37□□□□□ -1.07
DDX41-215ENST00000512431 TMBIM6P55061 237 aa8.37□□□□□ -1.07
DDX41-215ENST00000512431 RRAS2P62070 204 aaPredicted RBP8.37□□□□□ -1.07
DDX41-215ENST00000512431 CD300CQ08708 224 aa8.37□□□□□ -1.07
DDX41-215ENST00000512431 SH2D6Q7Z4S9 175 aa8.37□□□□□ -1.07
DDX41-215ENST00000512431 IQCF2Q8IXL9 164 aa8.37□□□□□ -1.07
DDX41-215ENST00000512431 LINC00477Q96M19 166 aa8.37□□□□□ -1.07
DDX41-215ENST00000512431 PSENENQ9NZ42 101 aa8.37□□□□□ -1.07
DDX41-215ENST00000512431 MGAT4CQ9UBM8 478 aa8.37□□□□□ -1.07
DDX41-215ENST00000512431 RABL2BQ9UNT1 228 aa8.37□□□□□ -1.07
DDX41-215ENST00000512431 ANKRD20A5PA0PJZ0 165 aa8.36□□□□□ -1.07
DDX41-215ENST00000512431 KLLNB2CW77 178 aa8.36□□□□□ -1.07
DDX41-215ENST00000512431 K7EPK0 472 aa8.36□□□□□ -1.07
DDX41-215ENST00000512431 IGLC2P0DOY2 106 aa8.36□□□□□ -1.07
DDX41-215ENST00000512431 VAMP1P23763 118 aa8.36□□□□□ -1.07
DDX41-215ENST00000512431 PPT1P50897 306 aa8.36□□□□□ -1.07
DDX41-215ENST00000512431 SLC38A11Q08AI6 406 aa8.36□□□□□ -1.07
DDX41-215ENST00000512431 TDRG1Q3Y452 100 aa8.36□□□□□ -1.07
DDX41-215ENST00000512431 TMEM128Q5BJH2 165 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms