RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 YTHDF2Q9Y5A9 579 aaKnown RBP11.27□□□□□ -0.61
GAPDH-210ENST00000496049 F6UZH7 168 aa11.26□□□□□ -0.61
GAPDH-210ENST00000496049 PDE6DO43924 150 aa11.26□□□□□ -0.61
GAPDH-210ENST00000496049 SLC25A5P05141 298 aaKnown RBP11.26□□□□□ -0.61
GAPDH-210ENST00000496049 ICAM4Q14773 271 aa11.26□□□□□ -0.61
GAPDH-210ENST00000496049 C5orf17Q8NAS9 161 aa11.26□□□□□ -0.61
GAPDH-210ENST00000496049 MRPL53Q96EL3 112 aaKnown RBP11.26□□□□□ -0.61
GAPDH-210ENST00000496049 SMDT1Q9H4I9 107 aa11.26□□□□□ -0.61
GAPDH-210ENST00000496049 PGPA6NDG6 321 aa11.25□□□□□ -0.61
GAPDH-210ENST00000496049 GGTLC3B5MD39 225 aa11.25□□□□□ -0.61
GAPDH-210ENST00000496049 G3V4G9 280 aa11.25□□□□□ -0.61
GAPDH-210ENST00000496049 K7EQG2 157 aa11.25□□□□□ -0.61
GAPDH-210ENST00000496049 K7EQM0 130 aa11.25□□□□□ -0.61
GAPDH-210ENST00000496049 SOCS3O14543 225 aa11.25□□□□□ -0.61
GAPDH-210ENST00000496049 ATP5G3P48201 142 aa11.25□□□□□ -0.61
GAPDH-210ENST00000496049 BEAN1Q3B7T3 259 aa11.25□□□□□ -0.61
GAPDH-210ENST00000496049 UQCC3Q6UW78 93 aa11.25□□□□□ -0.61
GAPDH-210ENST00000496049 EXOC3-AS1Q8N2X6 119 aa11.25□□□□□ -0.61
GAPDH-210ENST00000496049 ZNF738Q8NE65 137 aa11.25□□□□□ -0.61
GAPDH-210ENST00000496049 DCANP1Q8TF63 244 aa11.25□□□□□ -0.61
GAPDH-210ENST00000496049 SERTM2A0A1B0GWG4 89 aa11.24□□□□□ -0.61
GAPDH-210ENST00000496049 IGLL1P15814 213 aa11.24□□□□□ -0.61
GAPDH-210ENST00000496049 CMC4P56277 68 aaPredicted RBP11.24□□□□□ -0.61
GAPDH-210ENST00000496049 SUMO1P63165 101 aaKnown RBP11.24□□□□□ -0.61
GAPDH-210ENST00000496049 ARL6IP6Q8N6S5 226 aa11.24□□□□□ -0.61
GAPDH-210ENST00000496049 HIST1H2BAQ96A08 127 aa11.24□□□□□ -0.61
GAPDH-210ENST00000496049 LINC00052Q96N35 136 aa11.24□□□□□ -0.61
GAPDH-210ENST00000496049 TREM1Q9NP99 234 aa11.24□□□□□ -0.61
GAPDH-210ENST00000496049 ZMAT5Q9UDW3 170 aaKnown RBP11.24□□□□□ -0.61
GAPDH-210ENST00000496049 RPH3ALQ9UNE2 315 aa11.24□□□□□ -0.61
GAPDH-210ENST00000496049 NOTCH3Q9UM47 2321 aa11.24□□□□□ -0.61
GAPDH-210ENST00000496049 TRAV8-2A0A0B4J237 113 aa11.23□□□□□ -0.61
GAPDH-210ENST00000496049 NDUFS6O75380 124 aaKnown RBP11.23□□□□□ -0.61
GAPDH-210ENST00000496049 ZNF688P0C7X2 276 aa11.23□□□□□ -0.61
GAPDH-210ENST00000496049 PSG3Q16557 428 aa11.23□□□□□ -0.61
GAPDH-210ENST00000496049 RNF182Q8N6D2 247 aa11.23□□□□□ -0.61
GAPDH-210ENST00000496049 RPUSD4Q96CM3 377 aaKnown RBP11.23□□□□□ -0.61
GAPDH-210ENST00000496049 RARRES2Q99969 163 aa11.23□□□□□ -0.61
GAPDH-210ENST00000496049 ATG101Q9BSB4 218 aa11.23□□□□□ -0.61
GAPDH-210ENST00000496049 IZUMO1RA6ND01 250 aa11.22□□□□□ -0.61
GAPDH-210ENST00000496049 PEX7O00628 323 aa11.22□□□□□ -0.61
GAPDH-210ENST00000496049 PSMG4Q5JS54 123 aa11.22□□□□□ -0.61
GAPDH-210ENST00000496049 GTSCR1Q86UQ5 136 aa11.22□□□□□ -0.61
GAPDH-210ENST00000496049 EPDR1Q9UM22 224 aa11.22□□□□□ -0.61
GAPDH-210ENST00000496049 TENM2Q9NT68 2774 aa11.22□□□□□ -0.61
GAPDH-210ENST00000496049 TMEM250H0YL14 139 aa11.21□□□□□ -0.61
GAPDH-210ENST00000496049 AKR1C3P42330 323 aa11.21□□□□□ -0.61
GAPDH-210ENST00000496049 CNN1P51911 297 aaKnown RBP11.21□□□□□ -0.61
GAPDH-210ENST00000496049 CD81P60033 236 aa11.21□□□□□ -0.61
GAPDH-210ENST00000496049 IGFL4Q6B9Z1 124 aa11.21□□□□□ -0.61
GAPDH-210ENST00000496049 CCDC28AQ8IWP9 274 aa11.21□□□□□ -0.61
GAPDH-210ENST00000496049 EIF4E3Q8N5X7 224 aaKnown RBP11.21□□□□□ -0.61
GAPDH-210ENST00000496049 CYB561D1Q8N8Q1 229 aa11.21□□□□□ -0.61
GAPDH-210ENST00000496049 OR10J6PQ8NGY7 276 aa11.21□□□□□ -0.61
GAPDH-210ENST00000496049 SCO2A0A1W2PP80 73 aa11.2□□□□□ -0.62
GAPDH-210ENST00000496049 FBLL1A6NHQ2 334 aaKnown RBP11.2□□□□□ -0.62
GAPDH-210ENST00000496049 OR11H12B2RN74 326 aa11.2□□□□□ -0.62
GAPDH-210ENST00000496049 M0R3E3 92 aa11.2□□□□□ -0.62
GAPDH-210ENST00000496049 TCRAP04437 139 aa11.2□□□□□ -0.62
GAPDH-210ENST00000496049 HLA-DMBP28068 263 aa11.2□□□□□ -0.62
GAPDH-210ENST00000496049 CEBPGP53567 150 aa11.2□□□□□ -0.62
GAPDH-210ENST00000496049 GNG5P63218 68 aa11.2□□□□□ -0.62
GAPDH-210ENST00000496049 EBLN2Q6P2I7 272 aa11.2□□□□□ -0.62
GAPDH-210ENST00000496049 C11orf52Q96A22 123 aa11.2□□□□□ -0.62
GAPDH-210ENST00000496049 ZNF256Q9Y2P7 627 aaPredicted RBP11.2□□□□□ -0.62
GAPDH-210ENST00000496049 DIRC3C9JPN6 131 aa11.19□□□□□ -0.62
GAPDH-210ENST00000496049 S100A9P06702 114 aaKnown RBP11.19□□□□□ -0.62
GAPDH-210ENST00000496049 UBE2G1P62253 170 aa11.19□□□□□ -0.62
GAPDH-210ENST00000496049 GOLT1AQ6ZVE7 132 aa11.19□□□□□ -0.62
GAPDH-210ENST00000496049 FAM24BQ8N5W8 94 aa11.19□□□□□ -0.62
GAPDH-210ENST00000496049 C20orf173Q96LM9 149 aa11.19□□□□□ -0.62
GAPDH-210ENST00000496049 SLC35B3Q9H1N7 401 aa11.19□□□□□ -0.62
GAPDH-210ENST00000496049 MAP6D1Q9H9H5 199 aa11.19□□□□□ -0.62
GAPDH-210ENST00000496049 DNAH3Q8TD57 4116 aa11.19□□□□□ -0.62
GAPDH-210ENST00000496049 HYDINQ4G0P3 5121 aa11.19□□□□□ -0.62
GAPDH-210ENST00000496049 SACSQ9NZJ4 4579 aa11.19□□□□□ -0.62
GAPDH-210ENST00000496049 RBAKDNA6NC62 111 aa11.18□□□□□ -0.62
GAPDH-210ENST00000496049 DEFB131AP59861 70 aa11.18□□□□□ -0.62
GAPDH-210ENST00000496049 FOXI2Q6ZQN5 318 aa11.18□□□□□ -0.62
GAPDH-210ENST00000496049 TMEM75Q8N9X5 138 aa11.18□□□□□ -0.62
GAPDH-210ENST00000496049 FMC1Q96HJ9 113 aa11.18□□□□□ -0.62
GAPDH-210ENST00000496049 FAM110AQ9BQ89 295 aa11.18□□□□□ -0.62
GAPDH-210ENST00000496049 ZNF705FA8MVS1 300 aaPredicted RBP11.17□□□□□ -0.62
GAPDH-210ENST00000496049 DUSP14O95147 198 aaKnown RBP11.17□□□□□ -0.62
GAPDH-210ENST00000496049 SRP19P09132 144 aaKnown RBP11.17□□□□□ -0.62
GAPDH-210ENST00000496049 SFTA3P0C7M3 94 aa11.17□□□□□ -0.62
GAPDH-210ENST00000496049 SRSF3P84103 164 aaKnown RBP11.17□□□□□ -0.62
GAPDH-210ENST00000496049 KPRPQ5T749 579 aaPredicted RBP11.17□□□□□ -0.62
GAPDH-210ENST00000496049 TMEM78Q5T7P6 136 aa11.17□□□□□ -0.62
GAPDH-210ENST00000496049 OR8A1Q8NGG7 326 aa11.17□□□□□ -0.62
GAPDH-210ENST00000496049 CITED4Q96RK1 184 aa11.17□□□□□ -0.62
GAPDH-210ENST00000496049 NDFIP1Q9BT67 221 aa11.17□□□□□ -0.62
GAPDH-210ENST00000496049 DNAH9Q9NYC9 4486 aa11.17□□□□□ -0.62
GAPDH-210ENST00000496049 IGKV2-40A0A087WW87 121 aaPredicted RBP11.16□□□□□ -0.62
GAPDH-210ENST00000496049 IGKV2D-40P01614 121 aaPredicted RBP11.16□□□□□ -0.62
GAPDH-210ENST00000496049 HIST1H1AQ02539 215 aaPredicted RBP11.16□□□□□ -0.62
GAPDH-210ENST00000496049 ZNF674Q2M3X9 581 aa11.16□□□□□ -0.62
GAPDH-210ENST00000496049 ODF3L2Q3SX64 289 aa11.16□□□□□ -0.62
GAPDH-210ENST00000496049 FAM74A3Q4VXF1 159 aa11.16□□□□□ -0.62
GAPDH-210ENST00000496049 SOHLH1Q5JUK2 328 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms