RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 AKR1C1Q04828 323 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 BAXQ07812 192 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 OR2F1Q13607 317 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 EXOSC2Q13868 293 aaKnown RBP4.7□□□□□ -1.66
VIM-207ENST00000495528 GUCA2BQ16661 112 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 KLK9Q2XQG4 91 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 Q56UQ5 140 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.7□□□□□ -1.66
VIM-207ENST00000495528 SLC16A13Q7RTY0 426 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 FAM223AQ8IWN6 122 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 RPP25LQ8N5L8 163 aaKnown RBP4.7□□□□□ -1.66
VIM-207ENST00000495528 SCGB1C1Q8TD33 95 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 VN1R17PQ8TDU5 208 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 CACNG8Q8WXS5 425 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 EEF1AKMT3Q96AZ1 226 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 SLC35E1Q96K37 410 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 CXorf58Q96LI9 332 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 VGLL1Q99990 258 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 OVOL2Q9BRP0 275 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 ARL6Q9H0F7 186 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 KLK9Q9UKQ9 250 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 RFNGQ9Y644 331 aa4.7□□□□□ -1.66
VIM-207ENST00000495528 TRBV7-1A0A0A6YYK4 115 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 IGHV3-35A0A0C4DH35 117 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 A0A0J9YWU9 116 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 KANTRA0A1W2PQU2 76 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 OR2T8A6NH00 312 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 TAAR5O14804 337 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 GNG7O60262 68 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 SPP1P10451 314 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 FOLR2P14207 255 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 FGF7P21781 194 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 NPBWR1P48145 328 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 TIGITQ495A1 244 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 RPL7L1Q6DKI1 246 aaKnown RBP4.69□□□□□ -1.66
VIM-207ENST00000495528 BTNL8Q6UX41 500 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 TMEM144Q7Z5S9 345 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 C9orf62Q8N4C0 152 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 OR4X1Q8NH49 305 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 ZNF502Q8TBZ5 544 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 DYNLRB2Q8TF09 96 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 PPP1R14BQ96C90 147 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 TXN2Q99757 166 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 ATP5SQ99766 215 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 TMEM147Q9BVK8 224 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 GGACTQ9BVM4 153 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 CYTL1Q9NRR1 136 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 UQCC1Q9NVA1 299 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 C21orf62Q9NYP8 219 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 KIAA1109Q2LD37 5005 aa4.69□□□□□ -1.66
VIM-207ENST00000495528 IGKV1OR2-108A0A075B7D4 117 aa4.68□□□□□ -1.66
VIM-207ENST00000495528 TRAV30A0A087WSZ9 112 aa4.68□□□□□ -1.66
VIM-207ENST00000495528 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.68□□□□□ -1.66
VIM-207ENST00000495528 BORCS7-ASMTA0A0B4J1R7 106 aa4.68□□□□□ -1.66
VIM-207ENST00000495528 UBE2L5PA0A1B0GUS4 154 aa4.68□□□□□ -1.66
VIM-207ENST00000495528 C2orf70A6NJV1 201 aa4.68□□□□□ -1.66
VIM-207ENST00000495528 ZFP92A6NM28 416 aa4.68□□□□□ -1.66
VIM-207ENST00000495528 PPP5D1E7EU14 171 aa4.68□□□□□ -1.66
VIM-207ENST00000495528 AGPAT2O15120 278 aa4.68□□□□□ -1.66
VIM-207ENST00000495528 CLN5O75503 358 aa4.68□□□□□ -1.66
VIM-207ENST00000495528 CTSGP08311 255 aa4.68□□□□□ -1.66
VIM-207ENST00000495528 GATA2P23769 480 aaPredicted RBP4.68□□□□□ -1.66
VIM-207ENST00000495528 OR10J1P30954 320 aa4.68□□□□□ -1.66
VIM-207ENST00000495528 GPR183P32249 361 aa4.68□□□□□ -1.66
VIM-207ENST00000495528 ZNF90Q03938 601 aa4.68□□□□□ -1.66
VIM-207ENST00000495528 ZNF345Q14585 488 aa4.68□□□□□ -1.66
VIM-207ENST00000495528 CEMP1Q6PRD7 247 aaPredicted RBP4.68□□□□□ -1.66
VIM-207ENST00000495528 TMEM182Q6ZP80 229 aaPredicted RBP4.68□□□□□ -1.66
VIM-207ENST00000495528 CHRDL1Q9BU40 450 aa4.68□□□□□ -1.66
VIM-207ENST00000495528 GGTLC1Q9BX51 225 aa4.68□□□□□ -1.66
VIM-207ENST00000495528 ZNF471Q9BX82 626 aaPredicted RBP4.68□□□□□ -1.66
VIM-207ENST00000495528 TECRQ9NZ01 308 aaKnown RBP4.68□□□□□ -1.66
VIM-207ENST00000495528 IGKV1D-37A0A075B6S9 117 aa4.67□□□□□ -1.66
VIM-207ENST00000495528 LOC102724200A0A096LPH7 203 aaPredicted RBP4.67□□□□□ -1.66
VIM-207ENST00000495528 TRAV34A0A0B4J273 112 aa4.67□□□□□ -1.66
VIM-207ENST00000495528 NUPR2A6NF83 97 aa4.67□□□□□ -1.66
VIM-207ENST00000495528 FNDC10F2Z333 226 aa4.67□□□□□ -1.66
VIM-207ENST00000495528 LGALS9O00182 355 aa4.67□□□□□ -1.66
VIM-207ENST00000495528 NUPL2O15504 423 aaKnown RBP4.67□□□□□ -1.66
VIM-207ENST00000495528 TGOLN2O43493 480 aa4.67□□□□□ -1.66
VIM-207ENST00000495528 BCL2L11O43521 198 aa4.67□□□□□ -1.66
VIM-207ENST00000495528 YIF1AO95070 293 aa4.67□□□□□ -1.66
VIM-207ENST00000495528 RD3LP0DJH9 198 aa4.67□□□□□ -1.66
VIM-207ENST00000495528 C4BPBP20851 252 aa4.67□□□□□ -1.66
VIM-207ENST00000495528 CBLN1P23435 193 aa4.67□□□□□ -1.66
VIM-207ENST00000495528 CAMLGP49069 296 aa4.67□□□□□ -1.66
VIM-207ENST00000495528 RAB31Q13636 194 aa4.67□□□□□ -1.66
VIM-207ENST00000495528 CYP2G1PQ6ZSU1 146 aa4.67□□□□□ -1.66
VIM-207ENST00000495528 TMEM61Q8N0U2 210 aa4.67□□□□□ -1.66
VIM-207ENST00000495528 ZNF709Q8N972 641 aa4.67□□□□□ -1.66
VIM-207ENST00000495528 HSD17B11Q8NBQ5 300 aa4.67□□□□□ -1.66
VIM-207ENST00000495528 OCC1Q8TAD7 63 aa4.67□□□□□ -1.66
VIM-207ENST00000495528 Q8WTZ3 238 aa4.67□□□□□ -1.66
VIM-207ENST00000495528 FAM218AQ96MZ4 157 aa4.67□□□□□ -1.66
VIM-207ENST00000495528 MGST2Q99735 147 aa4.67□□□□□ -1.66
VIM-207ENST00000495528 WDR61Q9GZS3 305 aaKnown RBP4.67□□□□□ -1.66
VIM-207ENST00000495528 VPS13DQ5THJ4 4388 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 IGHV3OR16-8A0A075B7F1 116 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 ZNF320A2RRD8 509 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 TMEM213A2RRL7 107 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms