RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 CLDN25C9JDP6 229 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 INMT-MINDY4F8WBC2 141 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 BHLHE40O14503 412 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 OR5F1O95221 314 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 SERPINB10P48595 397 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 ZNF117Q03924 483 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 CDK10Q15131 360 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 GUK1Q16774 197 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 FAM229BQ4G0N7 80 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 DEFB121Q5J5C9 76 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 AAED1Q7RTV5 226 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 STX12Q86Y82 276 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 OR11H1Q8NG94 326 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 OR10P1Q8NGE3 313 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 GPR119Q8TDV5 335 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 ANP32BQ92688 251 aaKnown RBP1.87□□□□□ -2.11
SMC4-224ENST00000494612 SFRP2Q96HF1 295 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 BTF3L4Q96K17 158 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 CNBD2Q96M20 576 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 CCL13Q99616 98 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 LYSTQ99698 3801 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 C9orf16Q9BUW7 83 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 DOK5Q9P104 306 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 ANGPT4Q9Y264 503 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 CADP27708 2225 aa1.87□□□□□ -2.11
SMC4-224ENST00000494612 IGHV3-73A0A0B4J1V6 119 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 KNCNA6PVL3 124 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 PIAS1O75925 651 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 IGHV3-30-3P0DP02 117 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 CRYBB3P26998 211 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 MAGEA12P43365 314 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 LPAR6P43657 344 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 EVX1P49640 407 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 DEFA1P59665 94 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 CCL8P80075 99 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 KCNJ8Q15842 424 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 DEFB112Q30KQ8 113 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 TMEM97Q5BJF2 176 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 CTAGE3PQ8IX95 158 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 C20orf196Q8IYI0 205 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 SLC35F6Q8N357 371 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 SLC22A24Q8N4F4 322 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 ANKRD29Q8N6D5 301 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 DEFB108BQ8NET1 73 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 OR13C8Q8NGS7 320 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 ZNF563Q8TA94 476 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 RPS4Y2Q8TD47 263 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 NMNAT3Q96T66 252 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 DCSTAMPQ9H295 470 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 TAAR3PQ9P1P4 343 aa1.86□□□□□ -2.11
SMC4-224ENST00000494612 TMEM269A0A1B0GVZ9 245 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 DHRS12A0PJE2 317 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 TRAPPC2LH3BP13 241 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 PGRMC1O00264 195 aaKnown RBP1.85□□□□□ -2.11
SMC4-224ENST00000494612 SLC17A3O00476 420 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 NOS1APO75052 506 aaPredicted RBP1.85□□□□□ -2.11
SMC4-224ENST00000494612 SMIM24O75264 130 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 NPPCP23582 126 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 FKBP2P26885 142 aaKnown RBP1.85□□□□□ -2.11
SMC4-224ENST00000494612 G0S2P27469 103 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 FUSP35637 526 aaKnown RBP eCLIP1.85□□□□□ -2.11
SMC4-224ENST00000494612 GLRXP35754 106 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 CD200P41217 278 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 SERPINB9P50453 376 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 KRTAP12-4P60329 112 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 RPL30P62888 115 aaKnown RBP1.85□□□□□ -2.11
SMC4-224ENST00000494612 CAV1Q03135 178 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 GRK1Q15835 563 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 SDIM1Q6ZPB5 146 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 GRINAQ7Z429 371 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 GPHB5Q86YW7 130 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 C1orf158Q8N1D5 194 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 OR4S1Q8NGB4 309 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 ACOT12Q8WYK0 555 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 AP3S1Q92572 193 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 CMSS1Q9BQ75 279 aaKnown RBP1.85□□□□□ -2.11
SMC4-224ENST00000494612 MND1Q9BWT6 205 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 TLNRD1Q9H1K6 362 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 SMDT1Q9H4I9 107 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 NMNAT1Q9HAN9 279 aaPredicted RBP1.85□□□□□ -2.11
SMC4-224ENST00000494612 ACER3Q9NUN7 267 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 AK3Q9UIJ7 227 aa1.85□□□□□ -2.11
SMC4-224ENST00000494612 SAMHD1Q9Y3Z3 626 aaKnown RBP1.85□□□□□ -2.11
SMC4-224ENST00000494612 FAM32AQ9Y421 112 aaKnown RBP1.85□□□□□ -2.11
SMC4-224ENST00000494612 SOX21Q9Y651 276 aaPredicted RBP1.85□□□□□ -2.11
SMC4-224ENST00000494612 DNAH7Q8WXX0 4024 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 PLCE1Q9P212 2302 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 PQLC2LA1A4F0 135 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 GRIFINA4D1Z8 144 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 C19orf71A6NCJ1 209 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 OR4C46A6NHA9 309 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 FAM159BA6NKW6 160 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 OR11H12B2RN74 326 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 C9JCJ5 164 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 K7EIL1 84 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 CRYZL1O95825 349 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 HAND1O96004 215 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 IGHV1-69P01742 117 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 HLA-DRB1P01911 266 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 TTRP02766 147 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms