RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 PRR9Q5T870 116 aa6.21□□□□□ -1.42
HDAC3-211ENST00000491581 C10orf113Q5VZT2 155 aa6.21□□□□□ -1.42
HDAC3-211ENST00000491581 LINC00336Q6ZUF6 198 aa6.21□□□□□ -1.42
HDAC3-211ENST00000491581 EXOC3-AS1Q8N2X6 119 aa6.21□□□□□ -1.42
HDAC3-211ENST00000491581 ZNRF2Q8NHG8 242 aa6.21□□□□□ -1.42
HDAC3-211ENST00000491581 RNASE8Q8TDE3 154 aaKnown RBP6.21□□□□□ -1.42
HDAC3-211ENST00000491581 DEDD2Q8WXF8 326 aa6.21□□□□□ -1.42
HDAC3-211ENST00000491581 PPP1R14DQ9NXH3 145 aa6.21□□□□□ -1.42
HDAC3-211ENST00000491581 CENPXA8MT69 81 aa6.2□□□□□ -1.42
HDAC3-211ENST00000491581 L7N2F9 121 aa6.2□□□□□ -1.42
HDAC3-211ENST00000491581 NDUFB4O95168 129 aa6.2□□□□□ -1.42
HDAC3-211ENST00000491581 CDKN1BP46527 198 aa6.2□□□□□ -1.42
HDAC3-211ENST00000491581 SELENOTP62341 195 aa6.2□□□□□ -1.42
HDAC3-211ENST00000491581 VAMP2P63027 116 aa6.2□□□□□ -1.42
HDAC3-211ENST00000491581 IFITM3Q01628 133 aa6.2□□□□□ -1.42
HDAC3-211ENST00000491581 NHLH2Q02577 135 aa6.2□□□□□ -1.42
HDAC3-211ENST00000491581 CD300CQ08708 224 aa6.2□□□□□ -1.42
HDAC3-211ENST00000491581 IL15RAQ13261 267 aa6.2□□□□□ -1.42
HDAC3-211ENST00000491581 BTN1A1Q13410 526 aa6.2□□□□□ -1.42
HDAC3-211ENST00000491581 OR5I1Q13606 314 aa6.2□□□□□ -1.42
HDAC3-211ENST00000491581 ZNF546Q86UE3 836 aa6.2□□□□□ -1.42
HDAC3-211ENST00000491581 ZNF431Q8TF32 576 aaPredicted RBP6.2□□□□□ -1.42
HDAC3-211ENST00000491581 TP53TG3Q9ULZ0 132 aa6.2□□□□□ -1.42
HDAC3-211ENST00000491581 WDR83OSQ9Y284 106 aa6.2□□□□□ -1.42
HDAC3-211ENST00000491581 ABCA13Q86UQ4 5058 aa6.2□□□□□ -1.42
HDAC3-211ENST00000491581 TRAV26-1A0A087WT03 109 aa6.19□□□□□ -1.42
HDAC3-211ENST00000491581 IGKV2-40A0A087WW87 121 aaPredicted RBP6.19□□□□□ -1.42
HDAC3-211ENST00000491581 PIGBOS1A0A0B4J2F0 54 aa6.19□□□□□ -1.42
HDAC3-211ENST00000491581 LYRM9A8MSI8 78 aa6.19□□□□□ -1.42
HDAC3-211ENST00000491581 IGKV2D-40P01614 121 aaPredicted RBP6.19□□□□□ -1.42
HDAC3-211ENST00000491581 H2AFB2P0C5Z0 115 aa6.19□□□□□ -1.42
HDAC3-211ENST00000491581 TAS2R30P59541 319 aa6.19□□□□□ -1.42
HDAC3-211ENST00000491581 TAS2R60P59551 318 aa6.19□□□□□ -1.42
HDAC3-211ENST00000491581 BAXQ07812 192 aa6.19□□□□□ -1.42
HDAC3-211ENST00000491581 C1orf134Q5TEV5 83 aa6.19□□□□□ -1.42
HDAC3-211ENST00000491581 LCN15Q6UWW0 184 aa6.19□□□□□ -1.42
HDAC3-211ENST00000491581 Q6ZTI0 123 aa6.19□□□□□ -1.42
HDAC3-211ENST00000491581 C12orf45Q8N5I9 185 aaPredicted RBP6.19□□□□□ -1.42
HDAC3-211ENST00000491581 TMEM252Q8N6L7 170 aa6.19□□□□□ -1.42
HDAC3-211ENST00000491581 THAP6Q8TBB0 222 aa6.19□□□□□ -1.42
HDAC3-211ENST00000491581 BLNKQ8WV28 456 aa6.19□□□□□ -1.42
HDAC3-211ENST00000491581 C2orf50Q96LR7 162 aa6.19□□□□□ -1.42
HDAC3-211ENST00000491581 ATG101Q9BSB4 218 aa6.19□□□□□ -1.42
HDAC3-211ENST00000491581 TMPRSS5Q9H3S3 457 aa6.19□□□□□ -1.42
HDAC3-211ENST00000491581 OR5AC2Q9NZP5 309 aa6.19□□□□□ -1.42
HDAC3-211ENST00000491581 PXMP4Q9Y6I8 212 aa6.19□□□□□ -1.42
HDAC3-211ENST00000491581 HSPG2P98160 4391 aa6.19□□□□□ -1.42
HDAC3-211ENST00000491581 NBDYA0A0U1RRE5 68 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 CBY3A6NI87 242 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 FNDC10F2Z333 226 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 H0YIZ8 118 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 ATP5G1P05496 136 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 FGF7P21781 194 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 TSPOP30536 169 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 ATP5G3P48201 142 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 ZNF846Q147U1 533 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 RNF212Q495C1 297 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 LRRC37A5PQ49AS3 106 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 SAMD13Q5VXD3 122 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 MIR17HGQ75NE6 70 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 SSX7Q7RTT5 188 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 BPIFA4PQ86YQ2 179 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 C16orf74Q96GX8 76 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 FAM210BQ96KR6 192 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 SLC25A2Q9BXI2 301 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 AGPAT4-IT1Q9H0P7 198 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 DNAJC4Q9NNZ3 241 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 GSN-AS1Q9NRJ2 163 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 SLC39A9Q9NUM3 307 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 UQCC1Q9NVA1 299 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 KLF12Q9Y4X4 402 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 TIMM8BQ9Y5J9 83 aaPredicted RBP6.18□□□□□ -1.42
HDAC3-211ENST00000491581 RYR1P21817 5038 aa6.18□□□□□ -1.42
HDAC3-211ENST00000491581 TEX48A0A1B0GUV7 120 aa6.17□□□□□ -1.42
HDAC3-211ENST00000491581 NPIPB6E9PJ23 425 aa6.17□□□□□ -1.42
HDAC3-211ENST00000491581 IGHV3-53P01767 116 aa6.17□□□□□ -1.42
HDAC3-211ENST00000491581 B2MP61769 119 aa6.17□□□□□ -1.42
HDAC3-211ENST00000491581 ESRGQ1W209 222 aa6.17□□□□□ -1.42
HDAC3-211ENST00000491581 VWC2Q2TAL6 325 aa6.17□□□□□ -1.42
HDAC3-211ENST00000491581 LINC01559Q495D7 138 aa6.17□□□□□ -1.42
HDAC3-211ENST00000491581 FAM122CQ6P4D5 195 aa6.17□□□□□ -1.42
HDAC3-211ENST00000491581 LINC00612Q8N6U2 182 aa6.17□□□□□ -1.42
HDAC3-211ENST00000491581 OR10J6PQ8NGY7 276 aa6.17□□□□□ -1.42
HDAC3-211ENST00000491581 Q8TAT8 98 aa6.17□□□□□ -1.42
HDAC3-211ENST00000491581 TMEM263Q8WUH6 116 aaKnown RBP6.17□□□□□ -1.42
HDAC3-211ENST00000491581 FAM167A-AS1Q96KT0 104 aa6.17□□□□□ -1.42
HDAC3-211ENST00000491581 VGLL1Q99990 258 aa6.17□□□□□ -1.42
HDAC3-211ENST00000491581 SLC50A1Q9BRV3 221 aa6.17□□□□□ -1.42
HDAC3-211ENST00000491581 GPN1Q9HCN4 374 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-211ENST00000491581 LYRM2Q9NU23 88 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-211ENST00000491581 TNFRSF18Q9Y5U5 241 aa6.17□□□□□ -1.42
HDAC3-211ENST00000491581 TRBV19A0A075B6N1 114 aa6.16□□□□□ -1.42
HDAC3-211ENST00000491581 A0A096LPF7 62 aa6.16□□□□□ -1.42
HDAC3-211ENST00000491581 FAM240BA0A1B0GVZ2 78 aa6.16□□□□□ -1.42
HDAC3-211ENST00000491581 H7BYZ3 331 aa6.16□□□□□ -1.42
HDAC3-211ENST00000491581 OR10J4P0C629 311 aa6.16□□□□□ -1.42
HDAC3-211ENST00000491581 MED14OSP0DP75 135 aa6.16□□□□□ -1.42
HDAC3-211ENST00000491581 RNASE4P34096 147 aaKnown RBP6.16□□□□□ -1.42
HDAC3-211ENST00000491581 SULT1A1P50225 295 aa6.16□□□□□ -1.42
HDAC3-211ENST00000491581 CLINT1Q14677 625 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms