RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 A0A0D9SG52 128 aa9.88□□□□□ -0.83
SPTLC1-207ENST00000488921 UBE2L5PA0A1B0GUS4 154 aa9.88□□□□□ -0.83
SPTLC1-207ENST00000488921 M0R2Z0 102 aa9.88□□□□□ -0.83
SPTLC1-207ENST00000488921 IFNA5P01569 189 aa9.88□□□□□ -0.83
SPTLC1-207ENST00000488921 RHOBP62745 196 aa9.88□□□□□ -0.83
SPTLC1-207ENST00000488921 VWC2Q2TAL6 325 aa9.88□□□□□ -0.83
SPTLC1-207ENST00000488921 FAM222AQ5U5X8 452 aa9.88□□□□□ -0.83
SPTLC1-207ENST00000488921 NDUFAF3Q9BU61 184 aa9.88□□□□□ -0.83
SPTLC1-207ENST00000488921 DNAJC4Q9NNZ3 241 aa9.88□□□□□ -0.83
SPTLC1-207ENST00000488921 BIRC6Q9NR09 4857 aa9.87□□□□□ -0.83
SPTLC1-207ENST00000488921 G3V3Q6 166 aa9.87□□□□□ -0.83
SPTLC1-207ENST00000488921 TAAR5O14804 337 aa9.87□□□□□ -0.83
SPTLC1-207ENST00000488921 PRR20EP86478 221 aa9.87□□□□□ -0.83
SPTLC1-207ENST00000488921 PRR20CP86479 221 aa9.87□□□□□ -0.83
SPTLC1-207ENST00000488921 PRR20DP86480 221 aa9.87□□□□□ -0.83
SPTLC1-207ENST00000488921 PRR20BP86481 221 aa9.87□□□□□ -0.83
SPTLC1-207ENST00000488921 PRR20AP86496 221 aa9.87□□□□□ -0.83
SPTLC1-207ENST00000488921 CLINT1Q14677 625 aa9.87□□□□□ -0.83
SPTLC1-207ENST00000488921 TMEM256Q8N2U0 113 aa9.87□□□□□ -0.83
SPTLC1-207ENST00000488921 OR11H4Q8NGC9 324 aa9.87□□□□□ -0.83
SPTLC1-207ENST00000488921 SCGB1C1Q8TD33 95 aa9.87□□□□□ -0.83
SPTLC1-207ENST00000488921 TMEM37Q8WXS4 190 aa9.87□□□□□ -0.83
SPTLC1-207ENST00000488921 RPUSD4Q96CM3 377 aaKnown RBP9.87□□□□□ -0.83
SPTLC1-207ENST00000488921 FAM210BQ96KR6 192 aa9.87□□□□□ -0.83
SPTLC1-207ENST00000488921 SMIM3Q9BZL3 60 aa9.87□□□□□ -0.83
SPTLC1-207ENST00000488921 ZNF331Q9NQX6 463 aaPredicted RBP9.87□□□□□ -0.83
SPTLC1-207ENST00000488921 YTHDF2Q9Y5A9 579 aaKnown RBP9.87□□□□□ -0.83
SPTLC1-207ENST00000488921 PXMP4Q9Y6I8 212 aa9.87□□□□□ -0.83
SPTLC1-207ENST00000488921 BORCS7-ASMTA0A0B4J1R7 106 aa9.86□□□□□ -0.83
SPTLC1-207ENST00000488921 CRXO43186 299 aaPredicted RBP9.86□□□□□ -0.83
SPTLC1-207ENST00000488921 MPDU1O75352 247 aa9.86□□□□□ -0.83
SPTLC1-207ENST00000488921 P0DMU3 169 aa9.86□□□□□ -0.83
SPTLC1-207ENST00000488921 FAM231AP0DMU4 169 aa9.86□□□□□ -0.83
SPTLC1-207ENST00000488921 FAM231CP0DMU5 169 aa9.86□□□□□ -0.83
SPTLC1-207ENST00000488921 RPL29P47914 159 aaKnown RBP9.86□□□□□ -0.83
SPTLC1-207ENST00000488921 ZNF266Q14584 549 aa9.86□□□□□ -0.83
SPTLC1-207ENST00000488921 ZNF345Q14585 488 aa9.86□□□□□ -0.83
SPTLC1-207ENST00000488921 OPCMLQ14982 345 aa9.86□□□□□ -0.83
SPTLC1-207ENST00000488921 GUK1Q16774 197 aa9.86□□□□□ -0.83
SPTLC1-207ENST00000488921 MIC13Q5XKP0 118 aa9.86□□□□□ -0.83
SPTLC1-207ENST00000488921 BAP18Q8IXM2 172 aa9.86□□□□□ -0.83
SPTLC1-207ENST00000488921 ATP5SQ99766 215 aa9.86□□□□□ -0.83
SPTLC1-207ENST00000488921 KANTRA0A1W2PQU2 76 aa9.85□□□□□ -0.83
SPTLC1-207ENST00000488921 RNF222A6NCQ9 220 aa9.85□□□□□ -0.83
SPTLC1-207ENST00000488921 IGLC2P0DOY2 106 aa9.85□□□□□ -0.83
SPTLC1-207ENST00000488921 FGF7P21781 194 aa9.85□□□□□ -0.83
SPTLC1-207ENST00000488921 TSPOP30536 169 aa9.85□□□□□ -0.83
SPTLC1-207ENST00000488921 DAD1P61803 113 aa9.85□□□□□ -0.83
SPTLC1-207ENST00000488921 CD300CQ08708 224 aa9.85□□□□□ -0.83
SPTLC1-207ENST00000488921 KCNRGQ8N5I3 272 aa9.85□□□□□ -0.83
SPTLC1-207ENST00000488921 SLC39A9Q9NUM3 307 aa9.85□□□□□ -0.83
SPTLC1-207ENST00000488921 TRAV12-2A0A075B6T6 113 aa9.84□□□□□ -0.83
SPTLC1-207ENST00000488921 LYRM9A8MSI8 78 aa9.84□□□□□ -0.83
SPTLC1-207ENST00000488921 CDKN1BP46527 198 aa9.84□□□□□ -0.83
SPTLC1-207ENST00000488921 MORN5Q5VZ52 161 aa9.84□□□□□ -0.83
SPTLC1-207ENST00000488921 OR10J6PQ8NGY7 276 aa9.84□□□□□ -0.83
SPTLC1-207ENST00000488921 ARPC5LQ9BPX5 153 aa9.84□□□□□ -0.83
SPTLC1-207ENST00000488921 DNAH10Q8IVF4 4471 aa9.84□□□□□ -0.83
SPTLC1-207ENST00000488921 C17orf112F2Z3M2 114 aa9.83□□□□□ -0.84
SPTLC1-207ENST00000488921 SLC17A3O00476 420 aa9.83□□□□□ -0.84
SPTLC1-207ENST00000488921 ZNF253O75346 499 aa9.83□□□□□ -0.84
SPTLC1-207ENST00000488921 EIF5AP63241 154 aaKnown RBP9.83□□□□□ -0.84
SPTLC1-207ENST00000488921 TMUB2Q71RG4 321 aa9.83□□□□□ -0.84
SPTLC1-207ENST00000488921 LINC01587Q99440 93 aa9.83□□□□□ -0.84
SPTLC1-207ENST00000488921 C20orf144Q9BQM9 153 aa9.83□□□□□ -0.84
SPTLC1-207ENST00000488921 KCNIP2Q9NS61 270 aa9.83□□□□□ -0.84
SPTLC1-207ENST00000488921 ZNF705GA8MUZ8 300 aaPredicted RBP9.82□□□□□ -0.84
SPTLC1-207ENST00000488921 SNRPCP09234 159 aaKnown RBP9.82□□□□□ -0.84
SPTLC1-207ENST00000488921 HTN3P15516 51 aa9.82□□□□□ -0.84
SPTLC1-207ENST00000488921 TAS2R60P59551 318 aa9.82□□□□□ -0.84
SPTLC1-207ENST00000488921 SAT2Q96F10 170 aaPredicted RBP9.82□□□□□ -0.84
SPTLC1-207ENST00000488921 C16orf74Q96GX8 76 aa9.82□□□□□ -0.84
SPTLC1-207ENST00000488921 NPCDR1Q9BY65 106 aa9.82□□□□□ -0.84
SPTLC1-207ENST00000488921 WDR61Q9GZS3 305 aaKnown RBP9.82□□□□□ -0.84
SPTLC1-207ENST00000488921 H3BQ15 152 aa9.81□□□□□ -0.84
SPTLC1-207ENST00000488921 H3BTX0 84 aa9.81□□□□□ -0.84
SPTLC1-207ENST00000488921 H7BYZ3 331 aa9.81□□□□□ -0.84
SPTLC1-207ENST00000488921 BCL2L11O43521 198 aa9.81□□□□□ -0.84
SPTLC1-207ENST00000488921 PDE6HQ13956 83 aa9.81□□□□□ -0.84
SPTLC1-207ENST00000488921 LGALSLQ3ZCW2 172 aaPredicted RBP9.81□□□□□ -0.84
SPTLC1-207ENST00000488921 POM121L12Q8N7R1 296 aa9.81□□□□□ -0.84
SPTLC1-207ENST00000488921 MRPL53Q96EL3 112 aaKnown RBP9.81□□□□□ -0.84
SPTLC1-207ENST00000488921 ODF3Q96PU9 254 aa9.81□□□□□ -0.84
SPTLC1-207ENST00000488921 ZNF471Q9BX82 626 aaPredicted RBP9.81□□□□□ -0.84
SPTLC1-207ENST00000488921 PARD6GQ9BYG4 376 aaPredicted RBP9.81□□□□□ -0.84
SPTLC1-207ENST00000488921 WFDC1Q9HC57 220 aa9.81□□□□□ -0.84
SPTLC1-207ENST00000488921 TMEM14CQ9P0S9 112 aa9.81□□□□□ -0.84
SPTLC1-207ENST00000488921 TRAV5A0A0B4J249 113 aa9.8□□□□□ -0.84
SPTLC1-207ENST00000488921 RPL7L1Q6DKI1 246 aaKnown RBP9.8□□□□□ -0.84
SPTLC1-207ENST00000488921 ZNF493Q6ZR52 646 aa9.8□□□□□ -0.84
SPTLC1-207ENST00000488921 UBE2DNLQ8IWF7 75 aa9.8□□□□□ -0.84
SPTLC1-207ENST00000488921 C15orf53Q8NAA6 179 aa9.8□□□□□ -0.84
SPTLC1-207ENST00000488921 TMEM263Q8WUH6 116 aaKnown RBP9.8□□□□□ -0.84
SPTLC1-207ENST00000488921 GNPNAT1Q96EK6 184 aaPredicted RBP9.8□□□□□ -0.84
SPTLC1-207ENST00000488921 ZNF586Q9NXT0 402 aa9.8□□□□□ -0.84
SPTLC1-207ENST00000488921 PRELID1Q9Y255 219 aa9.8□□□□□ -0.84
SPTLC1-207ENST00000488921 TRBV19A0A075B6N1 114 aa9.79□□□□□ -0.84
SPTLC1-207ENST00000488921 HIST1H1EP10412 219 aaKnown RBP9.79□□□□□ -0.84
SPTLC1-207ENST00000488921 HTN1P15515 57 aa9.79□□□□□ -0.84
SPTLC1-207ENST00000488921 LEPP41159 167 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms