RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 SEPSECSQ9HD40 501 aaKnown RBP4.69□□□□□ -1.66
SEC22C-215ENST00000487701 SLC39A9Q9NUM3 307 aa4.69□□□□□ -1.66
SEC22C-215ENST00000487701 TP53TG1Q9Y2A0 90 aa4.69□□□□□ -1.66
SEC22C-215ENST00000487701 HSPB11Q9Y547 144 aa4.69□□□□□ -1.66
SEC22C-215ENST00000487701 PXMP4Q9Y6I8 212 aa4.69□□□□□ -1.66
SEC22C-215ENST00000487701 HLA-DRB4X5D2U9 266 aa4.69□□□□□ -1.66
SEC22C-215ENST00000487701 IGKV2D-30A0A075B6S6 120 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 A0A087X0K7 114 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 TRAV5A0A0B4J249 113 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 G3V3Q6 166 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 H3BMM0 161 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 MPDU1O75352 247 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 CA1P00915 261 aaPredicted RBP4.68□□□□□ -1.66
SEC22C-215ENST00000487701 SNRPCP09234 159 aaKnown RBP4.68□□□□□ -1.66
SEC22C-215ENST00000487701 GIPP09681 153 aaPredicted RBP4.68□□□□□ -1.66
SEC22C-215ENST00000487701 PET100P0DJ07 73 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 RPL7P18124 248 aaKnown RBP4.68□□□□□ -1.66
SEC22C-215ENST00000487701 HLA-DMBP28068 263 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 RPL12P30050 165 aaKnown RBP4.68□□□□□ -1.66
SEC22C-215ENST00000487701 S100A7P31151 101 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 MEOX2P50222 304 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 RAB31Q13636 194 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 C10orf113Q5VZT2 155 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 C9orf47Q6ZRZ4 202 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 RNF182Q8N6D2 247 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 MUC7Q8TAX7 377 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 LINC00052Q96N35 136 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 GPR82Q96P67 336 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 ATP5SQ99766 215 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 SMIM3Q9BZL3 60 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 WDR61Q9GZS3 305 aaKnown RBP4.68□□□□□ -1.66
SEC22C-215ENST00000487701 SAV1Q9H4B6 383 aaPredicted RBP4.68□□□□□ -1.66
SEC22C-215ENST00000487701 AAMDCQ9H7C9 122 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 DNAJC4Q9NNZ3 241 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 RFNGQ9Y644 331 aa4.68□□□□□ -1.66
SEC22C-215ENST00000487701 A0A0J9YWU9 116 aa4.67□□□□□ -1.66
SEC22C-215ENST00000487701 H3BTX0 84 aa4.67□□□□□ -1.66
SEC22C-215ENST00000487701 SLC17A3O00476 420 aa4.67□□□□□ -1.66
SEC22C-215ENST00000487701 IGKV3-20P01619 116 aa4.67□□□□□ -1.66
SEC22C-215ENST00000487701 IGLC2P0DOY2 106 aa4.67□□□□□ -1.66
SEC22C-215ENST00000487701 PRB4P10163 310 aaPredicted RBP4.67□□□□□ -1.66
SEC22C-215ENST00000487701 SPP1P10451 314 aa4.67□□□□□ -1.66
SEC22C-215ENST00000487701 ID1P41134 155 aa4.67□□□□□ -1.66
SEC22C-215ENST00000487701 FGL1Q08830 312 aa4.67□□□□□ -1.66
SEC22C-215ENST00000487701 SAMD13Q5VXD3 122 aa4.67□□□□□ -1.66
SEC22C-215ENST00000487701 SPATA31B1PQ5VZV4 182 aa4.67□□□□□ -1.66
SEC22C-215ENST00000487701 MORN3Q6PF18 240 aaPredicted RBP4.67□□□□□ -1.66
SEC22C-215ENST00000487701 FOXI2Q6ZQN5 318 aa4.67□□□□□ -1.66
SEC22C-215ENST00000487701 Q6ZRG5 221 aa4.67□□□□□ -1.66
SEC22C-215ENST00000487701 ZNF709Q8N972 641 aa4.67□□□□□ -1.66
SEC22C-215ENST00000487701 CSNK1G2-AS1Q8NCQ2 148 aa4.67□□□□□ -1.66
SEC22C-215ENST00000487701 OR1L4Q8NGR5 311 aa4.67□□□□□ -1.66
SEC22C-215ENST00000487701 PFDN5Q99471 154 aa4.67□□□□□ -1.66
SEC22C-215ENST00000487701 CLEC5AQ9NY25 188 aa4.67□□□□□ -1.66
SEC22C-215ENST00000487701 A0A0J9YX75 114 aa4.66□□□□□ -1.66
SEC22C-215ENST00000487701 RNF222A6NCQ9 220 aa4.66□□□□□ -1.66
SEC22C-215ENST00000487701 A8MTW9 85 aa4.66□□□□□ -1.66
SEC22C-215ENST00000487701 C3orf84H3BNL1 204 aa4.66□□□□□ -1.66
SEC22C-215ENST00000487701 H3BQ15 152 aa4.66□□□□□ -1.66
SEC22C-215ENST00000487701 FXYD7P58549 80 aa4.66□□□□□ -1.66
SEC22C-215ENST00000487701 CASC10Q5T4H9 136 aa4.66□□□□□ -1.66
SEC22C-215ENST00000487701 FAM78BQ5VT40 261 aa4.66□□□□□ -1.66
SEC22C-215ENST00000487701 ZFAND6Q6FIF0 208 aa4.66□□□□□ -1.66
SEC22C-215ENST00000487701 AMTNQ6UX39 209 aa4.66□□□□□ -1.66
SEC22C-215ENST00000487701 S100A7AQ86SG5 101 aa4.66□□□□□ -1.66
SEC22C-215ENST00000487701 BPIFA4PQ86YQ2 179 aa4.66□□□□□ -1.66
SEC22C-215ENST00000487701 OR4B1Q8NGF8 309 aa4.66□□□□□ -1.66
SEC22C-215ENST00000487701 OR11H2Q8NH07 326 aa4.66□□□□□ -1.66
SEC22C-215ENST00000487701 GATAD1Q8WUU5 269 aa4.66□□□□□ -1.66
SEC22C-215ENST00000487701 ASB13Q8WXK3 278 aa4.66□□□□□ -1.66
SEC22C-215ENST00000487701 SAT2Q96F10 170 aaPredicted RBP4.66□□□□□ -1.66
SEC22C-215ENST00000487701 FAM167A-AS1Q96KT0 104 aa4.66□□□□□ -1.66
SEC22C-215ENST00000487701 AQP10Q96PS8 301 aa4.66□□□□□ -1.66
SEC22C-215ENST00000487701 SLC25A2Q9BXI2 301 aa4.66□□□□□ -1.66
SEC22C-215ENST00000487701 PARD6GQ9BYG4 376 aaPredicted RBP4.66□□□□□ -1.66
SEC22C-215ENST00000487701 ZNF331Q9NQX6 463 aaPredicted RBP4.66□□□□□ -1.66
SEC22C-215ENST00000487701 RPRMQ9NS64 109 aa4.66□□□□□ -1.66
SEC22C-215ENST00000487701 XCL2Q9UBD3 114 aa4.66□□□□□ -1.66
SEC22C-215ENST00000487701 DYNC2H1Q8NCM8 4307 aaKnown RBP4.65□□□□□ -1.66
SEC22C-215ENST00000487701 ZNF705EA8MWA4 302 aaPredicted RBP4.65□□□□□ -1.67
SEC22C-215ENST00000487701 DEFB4AO15263 64 aa4.65□□□□□ -1.67
SEC22C-215ENST00000487701 ZNF705DP0CH99 300 aaPredicted RBP4.65□□□□□ -1.67
SEC22C-215ENST00000487701 ZNF705BP0CI00 300 aaPredicted RBP4.65□□□□□ -1.67
SEC22C-215ENST00000487701 PYYP10082 97 aa4.65□□□□□ -1.67
SEC22C-215ENST00000487701 CXCL2P19875 107 aa4.65□□□□□ -1.67
SEC22C-215ENST00000487701 TMEM41BQ5BJD5 291 aa4.65□□□□□ -1.67
SEC22C-215ENST00000487701 FFAR4Q5NUL3 377 aa4.65□□□□□ -1.67
SEC22C-215ENST00000487701 LCN15Q6UWW0 184 aa4.65□□□□□ -1.67
SEC22C-215ENST00000487701 MIR17HGQ75NE6 70 aa4.65□□□□□ -1.67
SEC22C-215ENST00000487701 Q8NAQ8 132 aa4.65□□□□□ -1.67
SEC22C-215ENST00000487701 ZNF738Q8NE65 137 aa4.65□□□□□ -1.67
SEC22C-215ENST00000487701 OR2T35Q8NGX2 323 aa4.65□□□□□ -1.67
SEC22C-215ENST00000487701 RARRES2Q99969 163 aa4.65□□□□□ -1.67
SEC22C-215ENST00000487701 SLC35B3Q9H1N7 401 aa4.65□□□□□ -1.67
SEC22C-215ENST00000487701 HRH4Q9H3N8 390 aa4.65□□□□□ -1.67
SEC22C-215ENST00000487701 ZNF586Q9NXT0 402 aa4.65□□□□□ -1.67
SEC22C-215ENST00000487701 TMEM14CQ9P0S9 112 aa4.65□□□□□ -1.67
SEC22C-215ENST00000487701 RNF24Q9Y225 148 aa4.65□□□□□ -1.67
SEC22C-215ENST00000487701 TRBV19A0A075B6N1 114 aa4.64□□□□□ -1.67
SEC22C-215ENST00000487701 FXYD6-FXYD2A0A087WZ82 144 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms