RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 C1QBP02746 253 aa9.17□□□□□ -0.94
HDAC6-227ENST00000485102 FGF7P21781 194 aa9.17□□□□□ -0.94
HDAC6-227ENST00000485102 B2MP61769 119 aa9.17□□□□□ -0.94
HDAC6-227ENST00000485102 ZNF90Q03938 601 aa9.17□□□□□ -0.94
HDAC6-227ENST00000485102 CLINT1Q14677 625 aa9.17□□□□□ -0.94
HDAC6-227ENST00000485102 AMTNQ6UX39 209 aa9.17□□□□□ -0.94
HDAC6-227ENST00000485102 PPP1R14BQ96C90 147 aa9.17□□□□□ -0.94
HDAC6-227ENST00000485102 WDR61Q9GZS3 305 aaKnown RBP9.17□□□□□ -0.94
HDAC6-227ENST00000485102 TIMM9Q9Y5J7 89 aa9.17□□□□□ -0.94
HDAC6-227ENST00000485102 DNAH5Q8TE73 4624 aa9.16□□□□□ -0.94
HDAC6-227ENST00000485102 ARPC5O15511 151 aa9.16□□□□□ -0.94
HDAC6-227ENST00000485102 LINC00869P0C866 280 aa9.16□□□□□ -0.94
HDAC6-227ENST00000485102 HTN3P15516 51 aa9.16□□□□□ -0.94
HDAC6-227ENST00000485102 TSPOP30536 169 aa9.16□□□□□ -0.94
HDAC6-227ENST00000485102 LYZP61626 148 aa9.16□□□□□ -0.94
HDAC6-227ENST00000485102 SERF2P84101 59 aa9.16□□□□□ -0.94
HDAC6-227ENST00000485102 TNP2Q05952 138 aa9.16□□□□□ -0.94
HDAC6-227ENST00000485102 ARL16Q0P5N6 197 aa9.16□□□□□ -0.94
HDAC6-227ENST00000485102 EIF5AL1Q6IS14 154 aaKnown RBP9.16□□□□□ -0.94
HDAC6-227ENST00000485102 OR8I2Q8N0Y5 310 aa9.16□□□□□ -0.94
HDAC6-227ENST00000485102 ZNRF2Q8NHG8 242 aa9.16□□□□□ -0.94
HDAC6-227ENST00000485102 NPCDR1Q9BY65 106 aa9.16□□□□□ -0.94
HDAC6-227ENST00000485102 DOK5Q9P104 306 aa9.16□□□□□ -0.94
HDAC6-227ENST00000485102 HIGD1AQ9Y241 93 aa9.16□□□□□ -0.94
HDAC6-227ENST00000485102 hCG_2014768A0A024R1R8 64 aa9.15□□□□□ -0.94
HDAC6-227ENST00000485102 NBDYA0A0U1RRE5 68 aa9.15□□□□□ -0.94
HDAC6-227ENST00000485102 C16orf90A8MZG2 172 aa9.15□□□□□ -0.94
HDAC6-227ENST00000485102 F6UB75 175 aa9.15□□□□□ -0.94
HDAC6-227ENST00000485102 PFDN1O60925 122 aa9.15□□□□□ -0.94
HDAC6-227ENST00000485102 ZFP69Q49AA0 526 aa9.15□□□□□ -0.94
HDAC6-227ENST00000485102 ST6GAL2Q96JF0 529 aa9.15□□□□□ -0.94
HDAC6-227ENST00000485102 C17orf77Q96MU5 243 aa9.15□□□□□ -0.94
HDAC6-227ENST00000485102 ARPC5LQ9BPX5 153 aa9.15□□□□□ -0.94
HDAC6-227ENST00000485102 PSMG3Q9BT73 122 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-227ENST00000485102 DNAJC4Q9NNZ3 241 aa9.15□□□□□ -0.94
HDAC6-227ENST00000485102 APOBP04114 4563 aaKnown RBP9.14□□□□□ -0.95
HDAC6-227ENST00000485102 IGKV1OR2-108A0A075B7D4 117 aa9.14□□□□□ -0.95
HDAC6-227ENST00000485102 CRXO43186 299 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-227ENST00000485102 COX7A2P2O60397 106 aa9.14□□□□□ -0.95
HDAC6-227ENST00000485102 RPL7P18124 248 aaKnown RBP9.14□□□□□ -0.95
HDAC6-227ENST00000485102 ORM2P19652 201 aa9.14□□□□□ -0.95
HDAC6-227ENST00000485102 GALR1P47211 349 aa9.14□□□□□ -0.95
HDAC6-227ENST00000485102 OPCMLQ14982 345 aa9.14□□□□□ -0.95
HDAC6-227ENST00000485102 C6orf223Q8N319 242 aa9.14□□□□□ -0.95
HDAC6-227ENST00000485102 KCNRGQ8N5I3 272 aa9.14□□□□□ -0.95
HDAC6-227ENST00000485102 OR1B1Q8NGR6 318 aa9.14□□□□□ -0.95
HDAC6-227ENST00000485102 C20orf173Q96LM9 149 aa9.14□□□□□ -0.95
HDAC6-227ENST00000485102 MGST2Q99735 147 aa9.14□□□□□ -0.95
HDAC6-227ENST00000485102 ATG101Q9BSB4 218 aa9.14□□□□□ -0.95
HDAC6-227ENST00000485102 SLC39A9Q9NUM3 307 aa9.14□□□□□ -0.95
HDAC6-227ENST00000485102 RNF222A6NCQ9 220 aa9.13□□□□□ -0.95
HDAC6-227ENST00000485102 DUSP14O95147 198 aaKnown RBP9.13□□□□□ -0.95
HDAC6-227ENST00000485102 OR5G3P0C626 314 aa9.13□□□□□ -0.95
HDAC6-227ENST00000485102 TAS2R45P59539 299 aa9.13□□□□□ -0.95
HDAC6-227ENST00000485102 ACOT6Q3I5F7 207 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-227ENST00000485102 C10orf113Q5VZT2 155 aa9.13□□□□□ -0.95
HDAC6-227ENST00000485102 C16orf92Q96LL3 132 aa9.13□□□□□ -0.95
HDAC6-227ENST00000485102 TMEM208Q9BTX3 173 aa9.13□□□□□ -0.95
HDAC6-227ENST00000485102 MRPL32Q9BYC8 188 aaKnown RBP9.13□□□□□ -0.95
HDAC6-227ENST00000485102 ARL6Q9H0F7 186 aa9.13□□□□□ -0.95
HDAC6-227ENST00000485102 PXMP4Q9Y6I8 212 aa9.13□□□□□ -0.95
HDAC6-227ENST00000485102 PLAC8L1A1L4L8 177 aa9.12□□□□□ -0.95
HDAC6-227ENST00000485102 ZNF98A6NK75 572 aa9.12□□□□□ -0.95
HDAC6-227ENST00000485102 Q5BKY6 102 aa9.12□□□□□ -0.95
HDAC6-227ENST00000485102 Q8N1X5 172 aa9.12□□□□□ -0.95
HDAC6-227ENST00000485102 MAPKAPK5-AS1Q8N8E1 139 aa9.12□□□□□ -0.95
HDAC6-227ENST00000485102 OR2G3Q8NGZ4 309 aa9.12□□□□□ -0.95
HDAC6-227ENST00000485102 RSG1Q9BU20 258 aa9.12□□□□□ -0.95
HDAC6-227ENST00000485102 SMIM3Q9BZL3 60 aa9.12□□□□□ -0.95
HDAC6-227ENST00000485102 ARV1Q9H2C2 271 aa9.12□□□□□ -0.95
HDAC6-227ENST00000485102 CBY3A6NI87 242 aa9.11□□□□□ -0.95
HDAC6-227ENST00000485102 G3V3Q6 166 aa9.11□□□□□ -0.95
HDAC6-227ENST00000485102 BCL2L11O43521 198 aa9.11□□□□□ -0.95
HDAC6-227ENST00000485102 INSP01308 110 aa9.11□□□□□ -0.95
HDAC6-227ENST00000485102 TPT1P13693 172 aaKnown RBP9.11□□□□□ -0.95
HDAC6-227ENST00000485102 CNN1P51911 297 aaKnown RBP9.11□□□□□ -0.95
HDAC6-227ENST00000485102 CCL18P55774 89 aa9.11□□□□□ -0.95
HDAC6-227ENST00000485102 RHOBP62745 196 aa9.11□□□□□ -0.95
HDAC6-227ENST00000485102 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.11□□□□□ -0.95
HDAC6-227ENST00000485102 BPIFA4PQ86YQ2 179 aa9.11□□□□□ -0.95
HDAC6-227ENST00000485102 SHANK2-AS3Q9BTD1 123 aa9.11□□□□□ -0.95
HDAC6-227ENST00000485102 SLC25A39Q9BZJ4 359 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-227ENST00000485102 SLC25A32Q9H2D1 315 aa9.11□□□□□ -0.95
HDAC6-227ENST00000485102 A0A1W2PPV4 95 aa9.1□□□□□ -0.95
HDAC6-227ENST00000485102 ZNF705GA8MUZ8 300 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-227ENST00000485102 UMAD1C9J7I0 102 aa9.1□□□□□ -0.95
HDAC6-227ENST00000485102 ATP5G1P05496 136 aa9.1□□□□□ -0.95
HDAC6-227ENST00000485102 CXCL2P19875 107 aa9.1□□□□□ -0.95
HDAC6-227ENST00000485102 M6PRP20645 277 aa9.1□□□□□ -0.95
HDAC6-227ENST00000485102 ATP5G3P48201 142 aa9.1□□□□□ -0.95
HDAC6-227ENST00000485102 GUK1Q16774 197 aa9.1□□□□□ -0.95
HDAC6-227ENST00000485102 LINC00305Q7Z4B0 112 aa9.1□□□□□ -0.95
HDAC6-227ENST00000485102 TMEM256Q8N2U0 113 aa9.1□□□□□ -0.95
HDAC6-227ENST00000485102 LINC00588Q9Y4M8 146 aa9.1□□□□□ -0.95
HDAC6-227ENST00000485102 TRAV8-2A0A0B4J237 113 aa9.09□□□□□ -0.95
HDAC6-227ENST00000485102 F5H768 121 aa9.09□□□□□ -0.95
HDAC6-227ENST00000485102 H3BRN7 92 aa9.09□□□□□ -0.95
HDAC6-227ENST00000485102 M0R2Z0 102 aa9.09□□□□□ -0.95
HDAC6-227ENST00000485102 PRM2P04554 102 aa9.09□□□□□ -0.95
HDAC6-227ENST00000485102 DEFB130BP0DP73 79 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms