RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 ARV1Q9H2C2 271 aa3.56□□□□□ -1.84
PTCD3-213ENST00000480102 TIMM9Q9Y5J7 89 aa3.56□□□□□ -1.84
PTCD3-213ENST00000480102 NBEAL2Q6ZNJ1 2754 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 A0A0J9YX75 114 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 GAGE10A6NGK3 116 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 FAM25EA8MYX2 175 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 C11orf94C9JXX5 98 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 C17orf112F2Z3M2 114 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 CCSO14618 274 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 ZNF207O43670 478 aaKnown RBP3.55□□□□□ -1.84
PTCD3-213ENST00000480102 SLC25A5P05141 298 aaKnown RBP3.55□□□□□ -1.84
PTCD3-213ENST00000480102 OR5G3P0C626 314 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 ORM2P19652 201 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 CXCL3P19876 107 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 SERF2P84101 59 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 ZNF266Q14584 549 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 RGS21Q2M5E4 152 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 C10orf113Q5VZT2 155 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 EBLN2Q6P2I7 272 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 AMTNQ6UX39 209 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 PATE2Q6UY27 113 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 LINC00305Q7Z4B0 112 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 APRG1Q8IVJ8 170 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 TMEM256Q8N2U0 113 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 ZNF709Q8N972 641 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 OR5C1Q8NGR4 320 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 OR2G3Q8NGZ4 309 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 ATP5SQ99766 215 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 RARRES2Q99969 163 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 LINC00467Q9BRT7 94 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 PBDC1Q9BVG4 233 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 WDR61Q9GZS3 305 aaKnown RBP3.55□□□□□ -1.84
PTCD3-213ENST00000480102 WFDC10AQ9H1F0 79 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 ZNF331Q9NQX6 463 aaPredicted RBP3.55□□□□□ -1.84
PTCD3-213ENST00000480102 DOK5Q9P104 306 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 PRELID1Q9Y255 219 aa3.55□□□□□ -1.84
PTCD3-213ENST00000480102 PLECQ15149 4684 aaKnown RBP3.54□□□□□ -1.84
PTCD3-213ENST00000480102 VPS13DQ5THJ4 4388 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 TRBV19A0A075B6N1 114 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 IGHV3OR16-13A0A075B7E8 117 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 IGHV3OR16-8A0A075B7F1 116 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 IGHV3-74A0A0B4J1X5 117 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 TRAV8-2A0A0B4J237 113 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 IGHV3-66A0A0C4DH42 116 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 IGSF23A1L1A6 192 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 SMCO3A2RU48 225 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 FAM24AA6NFZ4 105 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 FBLL1A6NHQ2 334 aaKnown RBP3.54□□□□□ -1.84
PTCD3-213ENST00000480102 SSNA1O43805 119 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 COX7A2P2O60397 106 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 CST7O76096 145 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 CA1P00915 261 aaPredicted RBP3.54□□□□□ -1.84
PTCD3-213ENST00000480102 MBP02144 154 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 ZNF688P0C7X2 276 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 HIST1H1EP10412 219 aaKnown RBP3.54□□□□□ -1.84
PTCD3-213ENST00000480102 BCAP31P51572 246 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 PSG9Q00887 426 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 PSG3Q16557 428 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 PSMG4Q5JS54 123 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 ZNF493Q6ZR52 646 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 GBGT1Q8N5D6 347 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 FAM24BQ8N5W8 94 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 Q8NAQ8 132 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 THAP6Q8TBB0 222 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 TMED6Q8WW62 240 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 PPP1R14BQ96C90 147 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 IGF2BP2-AS1Q96M15 143 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 ASCL2Q99929 193 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 PSMG3Q9BT73 122 aaPredicted RBP3.54□□□□□ -1.84
PTCD3-213ENST00000480102 RSG1Q9BU20 258 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 ARL6Q9H0F7 186 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 SLC39A9Q9NUM3 307 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 OR5AC2Q9NZP5 309 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 UBQLN2Q9UHD9 624 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 PAIP2BQ9ULR5 123 aaKnown RBP3.54□□□□□ -1.84
PTCD3-213ENST00000480102 TP53TG3Q9ULZ0 132 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 LSM5Q9Y4Y9 91 aaKnown RBP3.54□□□□□ -1.84
PTCD3-213ENST00000480102 HSPB11Q9Y547 144 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 LENEPQ9Y5L5 61 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 RYR3Q15413 4870 aa3.54□□□□□ -1.84
PTCD3-213ENST00000480102 IGHV3-49A0A0A0MS15 119 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 SERTM2A0A1B0GWG4 89 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 RBAKDNA6NC62 111 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 TAAR5O14804 337 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 CCNKO75909 580 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 GATA2P23769 480 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-213ENST00000480102 RPL12P30050 165 aaKnown RBP3.53□□□□□ -1.84
PTCD3-213ENST00000480102 TAS2R45P59539 299 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 S100A10P60903 97 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 RRAS2P62070 204 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-213ENST00000480102 OR2F1Q13607 317 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 ZNF345Q14585 488 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 DEFB135Q30KP9 77 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 ACTL10Q5JWF8 245 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 MORN5Q5VZ52 161 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 LEMD1Q68G75 181 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 CEMP1Q6PRD7 247 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-213ENST00000480102 PET117Q6UWS5 81 aa3.53□□□□□ -1.84
PTCD3-213ENST00000480102 PQLC2Q6ZP29 291 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms