RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 CSMD3Q7Z407 3707 aa6.1□□□□□ -1.43
HDAC6-221ENST00000477561 KIR2DL5BA0A0G2JN68 375 aa6.09□□□□□ -1.43
HDAC6-221ENST00000477561 KIR2DL5BA0A0G2JPC4 375 aa6.09□□□□□ -1.43
HDAC6-221ENST00000477561 LOC102723971A0A1B0GUV8 181 aa6.09□□□□□ -1.43
HDAC6-221ENST00000477561 K7EQG2 157 aa6.09□□□□□ -1.43
HDAC6-221ENST00000477561 UBE2CO00762 179 aa6.09□□□□□ -1.43
HDAC6-221ENST00000477561 OR7C2O60412 319 aa6.09□□□□□ -1.43
HDAC6-221ENST00000477561 NDUFS6O75380 124 aaKnown RBP6.09□□□□□ -1.43
HDAC6-221ENST00000477561 ZNF688P0C7X2 276 aa6.09□□□□□ -1.43
HDAC6-221ENST00000477561 ARL14EPLP0DKL9 152 aa6.09□□□□□ -1.43
HDAC6-221ENST00000477561 GCHFRP30047 84 aa6.09□□□□□ -1.43
HDAC6-221ENST00000477561 SPATA31B1PQ5VZV4 182 aa6.09□□□□□ -1.43
HDAC6-221ENST00000477561 PATE2Q6UY27 113 aa6.09□□□□□ -1.43
HDAC6-221ENST00000477561 Q6ZWC4 215 aa6.09□□□□□ -1.43
HDAC6-221ENST00000477561 KIR2DL5AQ8N109 375 aa6.09□□□□□ -1.43
HDAC6-221ENST00000477561 KIR2DL5BQ8NHK3 375 aa6.09□□□□□ -1.43
HDAC6-221ENST00000477561 SUN5Q8TC36 379 aa6.09□□□□□ -1.43
HDAC6-221ENST00000477561 GLMPQ8WWB7 406 aa6.09□□□□□ -1.43
HDAC6-221ENST00000477561 CSTL1Q9H114 145 aa6.09□□□□□ -1.43
HDAC6-221ENST00000477561 VAX2Q9UIW0 290 aa6.09□□□□□ -1.43
HDAC6-221ENST00000477561 ARL2-SNX15V9GYD0 113 aa6.09□□□□□ -1.43
HDAC6-221ENST00000477561 TRAV2A0A0B4J234 112 aa6.08□□□□□ -1.44
HDAC6-221ENST00000477561 A0A0J9YWU9 116 aa6.08□□□□□ -1.44
HDAC6-221ENST00000477561 TMEM218A2RU14 115 aa6.08□□□□□ -1.44
HDAC6-221ENST00000477561 HELTA6NFD8 242 aa6.08□□□□□ -1.44
HDAC6-221ENST00000477561 KNCNA6PVL3 124 aa6.08□□□□□ -1.44
HDAC6-221ENST00000477561 BUB3O43684 328 aa6.08□□□□□ -1.44
HDAC6-221ENST00000477561 EIF3GO75821 320 aaKnown RBP eCLIP6.08□□□□□ -1.44
HDAC6-221ENST00000477561 DCANP1Q8TF63 244 aa6.08□□□□□ -1.44
HDAC6-221ENST00000477561 RNF183Q96D59 192 aa6.08□□□□□ -1.44
HDAC6-221ENST00000477561 SHANK2-AS3Q9BTD1 123 aa6.08□□□□□ -1.44
HDAC6-221ENST00000477561 PAXXQ9BUH6 204 aa6.08□□□□□ -1.44
HDAC6-221ENST00000477561 SLC25A2Q9BXI2 301 aa6.08□□□□□ -1.44
HDAC6-221ENST00000477561 SLC25A39Q9BZJ4 359 aaPredicted RBP6.08□□□□□ -1.44
HDAC6-221ENST00000477561 OR51M1Q9H341 326 aa6.08□□□□□ -1.44
HDAC6-221ENST00000477561 PLECQ15149 4684 aaKnown RBP6.08□□□□□ -1.44
HDAC6-221ENST00000477561 H3BRN7 92 aa6.07□□□□□ -1.44
HDAC6-221ENST00000477561 CA1P00915 261 aaPredicted RBP6.07□□□□□ -1.44
HDAC6-221ENST00000477561 SFTA3P0C7M3 94 aa6.07□□□□□ -1.44
HDAC6-221ENST00000477561 UBE2L3P68036 154 aaKnown RBP6.07□□□□□ -1.44
HDAC6-221ENST00000477561 SRSF3P84103 164 aaKnown RBP6.07□□□□□ -1.44
HDAC6-221ENST00000477561 ICAM4Q14773 271 aa6.07□□□□□ -1.44
HDAC6-221ENST00000477561 PSMG4Q5JS54 123 aa6.07□□□□□ -1.44
HDAC6-221ENST00000477561 ACTL10Q5JWF8 245 aa6.07□□□□□ -1.44
HDAC6-221ENST00000477561 SIGLEC15Q6ZMC9 328 aa6.07□□□□□ -1.44
HDAC6-221ENST00000477561 BPIFA4PQ86YQ2 179 aa6.07□□□□□ -1.44
HDAC6-221ENST00000477561 STHQ8IWL8 128 aa6.07□□□□□ -1.44
HDAC6-221ENST00000477561 RXFP4Q8TDU9 374 aa6.07□□□□□ -1.44
HDAC6-221ENST00000477561 UHRF2Q96PU4 802 aa6.07□□□□□ -1.44
HDAC6-221ENST00000477561 RARRES2Q99969 163 aa6.07□□□□□ -1.44
HDAC6-221ENST00000477561 SCRT1Q9BWW7 348 aa6.07□□□□□ -1.44
HDAC6-221ENST00000477561 NKX6-2Q9C056 277 aaPredicted RBP6.07□□□□□ -1.44
HDAC6-221ENST00000477561 SLC35B3Q9H1N7 401 aa6.07□□□□□ -1.44
HDAC6-221ENST00000477561 TMPRSS5Q9H3S3 457 aa6.07□□□□□ -1.44
HDAC6-221ENST00000477561 TMEM14CQ9P0S9 112 aa6.07□□□□□ -1.44
HDAC6-221ENST00000477561 TP53TG1Q9Y2A0 90 aa6.07□□□□□ -1.44
HDAC6-221ENST00000477561 TRAV5A0A0B4J249 113 aa6.06□□□□□ -1.44
HDAC6-221ENST00000477561 A0A1W2PRE2 83 aa6.06□□□□□ -1.44
HDAC6-221ENST00000477561 ZNF98A6NK75 572 aa6.06□□□□□ -1.44
HDAC6-221ENST00000477561 F6UZH7 168 aa6.06□□□□□ -1.44
HDAC6-221ENST00000477561 F8W036 122 aa6.06□□□□□ -1.44
HDAC6-221ENST00000477561 PDE6DO43924 150 aa6.06□□□□□ -1.44
HDAC6-221ENST00000477561 PAGE4O60829 102 aa6.06□□□□□ -1.44
HDAC6-221ENST00000477561 RPL7P18124 248 aaKnown RBP6.06□□□□□ -1.44
HDAC6-221ENST00000477561 DEFB1P60022 68 aa6.06□□□□□ -1.44
HDAC6-221ENST00000477561 MEF2BQ02080 365 aaPredicted RBP6.06□□□□□ -1.44
HDAC6-221ENST00000477561 CST9LP1Q5W188 147 aa6.06□□□□□ -1.44
HDAC6-221ENST00000477561 IL17DQ8TAD2 202 aa6.06□□□□□ -1.44
HDAC6-221ENST00000477561 FAM167A-AS1Q96KT0 104 aa6.06□□□□□ -1.44
HDAC6-221ENST00000477561 SEC11CQ9BY50 192 aa6.06□□□□□ -1.44
HDAC6-221ENST00000477561 NRN1Q9NPD7 142 aa6.06□□□□□ -1.44
HDAC6-221ENST00000477561 RYR2Q92736 4967 aa6.06□□□□□ -1.44
HDAC6-221ENST00000477561 TENM2Q9NT68 2774 aa6.06□□□□□ -1.44
HDAC6-221ENST00000477561 FAM74A7A6NL05 159 aa6.05□□□□□ -1.44
HDAC6-221ENST00000477561 C11orf94C9JXX5 98 aa6.05□□□□□ -1.44
HDAC6-221ENST00000477561 TMEM250H0YL14 139 aa6.05□□□□□ -1.44
HDAC6-221ENST00000477561 DEFB4AO15263 64 aa6.05□□□□□ -1.44
HDAC6-221ENST00000477561 SRP19P09132 144 aaKnown RBP6.05□□□□□ -1.44
HDAC6-221ENST00000477561 OR10J4P0C629 311 aa6.05□□□□□ -1.44
HDAC6-221ENST00000477561 HIST1H1EP10412 219 aaKnown RBP6.05□□□□□ -1.44
HDAC6-221ENST00000477561 UBE2G2P60604 165 aa6.05□□□□□ -1.44
HDAC6-221ENST00000477561 SNRPD3P62318 126 aaKnown RBP6.05□□□□□ -1.44
HDAC6-221ENST00000477561 SOHLH1Q5JUK2 328 aa6.05□□□□□ -1.44
HDAC6-221ENST00000477561 C1orf194Q5T5A4 169 aa6.05□□□□□ -1.44
HDAC6-221ENST00000477561 MORN5Q5VZ52 161 aa6.05□□□□□ -1.44
HDAC6-221ENST00000477561 TRPT1Q86TN4 253 aaKnown RBP6.05□□□□□ -1.44
HDAC6-221ENST00000477561 OR8I2Q8N0Y5 310 aa6.05□□□□□ -1.44
HDAC6-221ENST00000477561 OR11H2Q8NH07 326 aa6.05□□□□□ -1.44
HDAC6-221ENST00000477561 FXYD5Q96DB9 178 aa6.05□□□□□ -1.44
HDAC6-221ENST00000477561 ZNF503Q96F45 646 aa6.05□□□□□ -1.44
HDAC6-221ENST00000477561 LINC00052Q96N35 136 aa6.05□□□□□ -1.44
HDAC6-221ENST00000477561 GPR82Q96P67 336 aa6.05□□□□□ -1.44
HDAC6-221ENST00000477561 TCEAL7Q9BRU2 100 aa6.05□□□□□ -1.44
HDAC6-221ENST00000477561 CLEC5AQ9NY25 188 aa6.05□□□□□ -1.44
HDAC6-221ENST00000477561 CARHSP1Q9Y2V2 147 aaKnown RBP6.05□□□□□ -1.44
HDAC6-221ENST00000477561 DNAH1Q9P2D7 4330 aa6.04□□□□□ -1.44
HDAC6-221ENST00000477561 CXorf65A6NEN9 183 aa6.04□□□□□ -1.44
HDAC6-221ENST00000477561 C9JQL5 133 aa6.04□□□□□ -1.44
HDAC6-221ENST00000477561 IGKV3-20P01619 116 aa6.04□□□□□ -1.44
HDAC6-221ENST00000477561 GIG44P09565 113 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms