RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 IGKV2D-26A0A0A0MRZ7 120 aa6.66□□□□□ -1.34
VAPB-205ENST00000476395 J3QR89 54 aa6.66□□□□□ -1.34
VAPB-205ENST00000476395 C8orf88P0DMB2 117 aa6.66□□□□□ -1.34
VAPB-205ENST00000476395 IFI27P40305 119 aaPredicted RBP6.66□□□□□ -1.34
VAPB-205ENST00000476395 CD300EQ496F6 205 aaPredicted RBP6.66□□□□□ -1.34
VAPB-205ENST00000476395 CHCHD1Q96BP2 118 aaKnown RBP6.66□□□□□ -1.34
VAPB-205ENST00000476395 RNF183Q96D59 192 aa6.66□□□□□ -1.34
VAPB-205ENST00000476395 ANAPC13Q9BS18 74 aa6.66□□□□□ -1.34
VAPB-205ENST00000476395 RPUSD1Q9UJJ7 312 aaKnown RBP6.66□□□□□ -1.34
VAPB-205ENST00000476395 PLCE1Q9P212 2302 aa6.66□□□□□ -1.34
VAPB-205ENST00000476395 A1L4Q6 167 aa6.66□□□□□ -1.34
VAPB-205ENST00000476395 NPIPB5A8MRT5 1133 aa6.66□□□□□ -1.34
VAPB-205ENST00000476395 ERVK-16P61578 105 aa6.66□□□□□ -1.34
VAPB-205ENST00000476395 TEX36Q5VZQ5 186 aa6.66□□□□□ -1.34
VAPB-205ENST00000476395 PVRIGQ6DKI7 326 aa6.66□□□□□ -1.34
VAPB-205ENST00000476395 CIARTQ8N365 385 aaPredicted RBP6.66□□□□□ -1.34
VAPB-205ENST00000476395 OR1L8Q8NGR8 309 aa6.66□□□□□ -1.34
VAPB-205ENST00000476395 FXYD5Q96DB9 178 aa6.66□□□□□ -1.34
VAPB-205ENST00000476395 CCL13Q99616 98 aa6.66□□□□□ -1.34
VAPB-205ENST00000476395 SPANXB1Q9NS25 103 aaPredicted RBP6.66□□□□□ -1.34
VAPB-205ENST00000476395 ATRXP46100 2492 aa6.66□□□□□ -1.34
VAPB-205ENST00000476395 INS-IGF2F8WCM5 200 aa6.65□□□□□ -1.34
VAPB-205ENST00000476395 CD69Q07108 199 aa6.65□□□□□ -1.34
VAPB-205ENST00000476395 LINC01559Q495D7 138 aa6.65□□□□□ -1.34
VAPB-205ENST00000476395 TPSG1Q9NRR2 321 aa6.65□□□□□ -1.34
VAPB-205ENST00000476395 DKK2Q9UBU2 259 aa6.65□□□□□ -1.34
VAPB-205ENST00000476395 K7EM74 188 aa6.65□□□□□ -1.34
VAPB-205ENST00000476395 C10orf55Q5SWW7 151 aa6.65□□□□□ -1.34
VAPB-205ENST00000476395 RASL11AQ6T310 242 aa6.65□□□□□ -1.34
VAPB-205ENST00000476395 OR1L4Q8NGR5 311 aa6.65□□□□□ -1.34
VAPB-205ENST00000476395 RND1Q92730 232 aa6.65□□□□□ -1.34
VAPB-205ENST00000476395 ADTRPQ96IZ2 230 aa6.65□□□□□ -1.34
VAPB-205ENST00000476395 MRPL20Q9BYC9 149 aaKnown RBP6.65□□□□□ -1.34
VAPB-205ENST00000476395 ARMS2P0C7Q2 107 aa6.65□□□□□ -1.35
VAPB-205ENST00000476395 GLRXP35754 106 aa6.65□□□□□ -1.35
VAPB-205ENST00000476395 FAM231DQ6ZW35 169 aa6.65□□□□□ -1.35
VAPB-205ENST00000476395 RPP21Q9H633 154 aaKnown RBP6.65□□□□□ -1.35
VAPB-205ENST00000476395 AP5S1Q9NUS5 200 aa6.65□□□□□ -1.35
VAPB-205ENST00000476395 AGRNO00468 2067 aa6.64□□□□□ -1.35
VAPB-205ENST00000476395 TM4SF5O14894 197 aa6.64□□□□□ -1.35
VAPB-205ENST00000476395 SLC25A5P05141 298 aaKnown RBP6.64□□□□□ -1.35
VAPB-205ENST00000476395 FHL3Q13643 280 aa6.64□□□□□ -1.35
VAPB-205ENST00000476395 BCL6BQ8N143 479 aaPredicted RBP6.64□□□□□ -1.35
VAPB-205ENST00000476395 OR5AN1Q8NGI8 311 aa6.64□□□□□ -1.35
VAPB-205ENST00000476395 FLYWCH2Q96CP2 140 aaKnown RBP6.64□□□□□ -1.35
VAPB-205ENST00000476395 ZNF714Q96N38 554 aa6.64□□□□□ -1.35
VAPB-205ENST00000476395 NHP2Q9NX24 153 aaKnown RBP6.64□□□□□ -1.35
VAPB-205ENST00000476395 LINC01548A6NM66 108 aa6.64□□□□□ -1.35
VAPB-205ENST00000476395 M0R1B8 84 aa6.64□□□□□ -1.35
VAPB-205ENST00000476395 FA2HQ7L5A8 372 aa6.64□□□□□ -1.35
VAPB-205ENST00000476395 OR5A1Q8NGJ0 315 aa6.64□□□□□ -1.35
VAPB-205ENST00000476395 MRAPQ8TCY5 172 aa6.64□□□□□ -1.35
VAPB-205ENST00000476395 PAXXQ9BUH6 204 aa6.64□□□□□ -1.35
VAPB-205ENST00000476395 PRNDQ9UKY0 176 aa6.64□□□□□ -1.35
VAPB-205ENST00000476395 ROS1P08922 2347 aa6.64□□□□□ -1.35
VAPB-205ENST00000476395 IGHV3-21A0A0B4J1V1 117 aa6.64□□□□□ -1.35
VAPB-205ENST00000476395 PGPA6NDG6 321 aa6.64□□□□□ -1.35
VAPB-205ENST00000476395 SMIM17P0DL12 118 aa6.64□□□□□ -1.35
VAPB-205ENST00000476395 DLX6P56179 175 aa6.64□□□□□ -1.35
VAPB-205ENST00000476395 SFTA2Q6UW10 78 aa6.64□□□□□ -1.35
VAPB-205ENST00000476395 ZCCHC24Q8N2G6 241 aaKnown RBP6.64□□□□□ -1.35
VAPB-205ENST00000476395 MLST8Q9BVC4 326 aa6.64□□□□□ -1.35
VAPB-205ENST00000476395 PROCRQ9UNN8 238 aa6.64□□□□□ -1.35
VAPB-205ENST00000476395 P01737 135 aa6.63□□□□□ -1.35
VAPB-205ENST00000476395 CCL3L1P16619 93 aa6.63□□□□□ -1.35
VAPB-205ENST00000476395 VGLL1Q99990 258 aa6.63□□□□□ -1.35
VAPB-205ENST00000476395 NDFIP1Q9BT67 221 aa6.63□□□□□ -1.35
VAPB-205ENST00000476395 SMKR1H3BMG3 65 aa6.63□□□□□ -1.35
VAPB-205ENST00000476395 RS1O15537 224 aa6.63□□□□□ -1.35
VAPB-205ENST00000476395 APELAP0DMC3 54 aa6.63□□□□□ -1.35
VAPB-205ENST00000476395 C3orf36Q3SXR2 165 aa6.63□□□□□ -1.35
VAPB-205ENST00000476395 ZADH2Q8N4Q0 377 aa6.63□□□□□ -1.35
VAPB-205ENST00000476395 DEFB108BQ8NET1 73 aa6.63□□□□□ -1.35
VAPB-205ENST00000476395 PRSS3P2Q8NHM4 247 aa6.63□□□□□ -1.35
VAPB-205ENST00000476395 MT-ATP8P03928 68 aa6.63□□□□□ -1.35
VAPB-205ENST00000476395 TAS2R45P59539 299 aa6.63□□□□□ -1.35
VAPB-205ENST00000476395 RBPMS2Q6ZRY4 209 aaKnown RBP6.63□□□□□ -1.35
VAPB-205ENST00000476395 ATP5L2Q7Z4Y8 100 aa6.63□□□□□ -1.35
VAPB-205ENST00000476395 THAP8Q8NA92 274 aa6.63□□□□□ -1.35
VAPB-205ENST00000476395 PRRG2O14669 202 aa6.62□□□□□ -1.35
VAPB-205ENST00000476395 ORM2P19652 201 aa6.62□□□□□ -1.35
VAPB-205ENST00000476395 ANXA2RQ3ZCQ2 193 aa6.62□□□□□ -1.35
VAPB-205ENST00000476395 RNF7Q9UBF6 113 aa6.62□□□□□ -1.35
VAPB-205ENST00000476395 TLN1Q9Y490 2541 aaKnown RBP6.62□□□□□ -1.35
VAPB-205ENST00000476395 A0A0U1RRA0 63 aa6.62□□□□□ -1.35
VAPB-205ENST00000476395 TMEM213A2RRL7 107 aa6.62□□□□□ -1.35
VAPB-205ENST00000476395 FAM27E3Q08E93 113 aa6.62□□□□□ -1.35
VAPB-205ENST00000476395 TMEM200BQ69YZ2 307 aa6.62□□□□□ -1.35
VAPB-205ENST00000476395 PHLDA1Q8WV24 401 aaPredicted RBP6.62□□□□□ -1.35
VAPB-205ENST00000476395 PRSS22Q9GZN4 317 aa6.62□□□□□ -1.35
VAPB-205ENST00000476395 CTSZQ9UBR2 303 aa6.62□□□□□ -1.35
VAPB-205ENST00000476395 EPDR1Q9UM22 224 aa6.62□□□□□ -1.35
VAPB-205ENST00000476395 KLF12Q9Y4X4 402 aa6.62□□□□□ -1.35
VAPB-205ENST00000476395 A0A1W2PRD5 423 aa6.62□□□□□ -1.35
VAPB-205ENST00000476395 A0A1W2PRF3 423 aa6.62□□□□□ -1.35
VAPB-205ENST00000476395 A0A1W2PRM7 423 aa6.62□□□□□ -1.35
VAPB-205ENST00000476395 TMEM189A5PLL7 270 aa6.62□□□□□ -1.35
VAPB-205ENST00000476395 COX7A2P2O60397 106 aa6.62□□□□□ -1.35
VAPB-205ENST00000476395 SMIM13P0DJ93 91 aa6.62□□□□□ -1.35
VAPB-205ENST00000476395 LYPD2Q6UXB3 125 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms