RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 TMEM167BQ9NRX6 74 aa7.29□□□□□ -1.24
SF3A1-207ENST00000471342 KLF12Q9Y4X4 402 aa7.29□□□□□ -1.24
SF3A1-207ENST00000471342 ARL2-SNX15V9GYD0 113 aa7.29□□□□□ -1.24
SF3A1-207ENST00000471342 TRBV20OR9-2A0A075B6H5 130 aa7.28□□□□□ -1.24
SF3A1-207ENST00000471342 A0A0J9YX75 114 aa7.28□□□□□ -1.24
SF3A1-207ENST00000471342 PGPA6NDG6 321 aa7.28□□□□□ -1.24
SF3A1-207ENST00000471342 DIRC3C9JPN6 131 aa7.28□□□□□ -1.24
SF3A1-207ENST00000471342 IGLV2-8P01709 118 aa7.28□□□□□ -1.24
SF3A1-207ENST00000471342 SRP19P09132 144 aaKnown RBP7.28□□□□□ -1.24
SF3A1-207ENST00000471342 ZNF705DP0CH99 300 aaPredicted RBP7.28□□□□□ -1.24
SF3A1-207ENST00000471342 ZNF705BP0CI00 300 aaPredicted RBP7.28□□□□□ -1.24
SF3A1-207ENST00000471342 BCL2P10415 239 aa7.28□□□□□ -1.24
SF3A1-207ENST00000471342 UBE2G2P60604 165 aa7.28□□□□□ -1.24
SF3A1-207ENST00000471342 SUMO1P63165 101 aaKnown RBP7.28□□□□□ -1.24
SF3A1-207ENST00000471342 EIF4E3Q8N5X7 224 aaKnown RBP7.28□□□□□ -1.24
SF3A1-207ENST00000471342 ARL6IP6Q8N6S5 226 aa7.28□□□□□ -1.24
SF3A1-207ENST00000471342 VGLL1Q99990 258 aa7.28□□□□□ -1.24
SF3A1-207ENST00000471342 TMEM231Q9H6L2 316 aa7.28□□□□□ -1.24
SF3A1-207ENST00000471342 OTORQ9NRC9 128 aa7.28□□□□□ -1.24
SF3A1-207ENST00000471342 GNG13Q9P2W3 67 aa7.28□□□□□ -1.24
SF3A1-207ENST00000471342 EPDR1Q9UM22 224 aa7.28□□□□□ -1.24
SF3A1-207ENST00000471342 SCO2A0A1W2PP80 73 aa7.27□□□□□ -1.25
SF3A1-207ENST00000471342 KNCNA6PVL3 124 aa7.27□□□□□ -1.25
SF3A1-207ENST00000471342 H3BMM0 161 aa7.27□□□□□ -1.25
SF3A1-207ENST00000471342 NDUFS6O75380 124 aaKnown RBP7.27□□□□□ -1.25
SF3A1-207ENST00000471342 HBE1P02100 147 aa7.27□□□□□ -1.25
SF3A1-207ENST00000471342 TCRAP04437 139 aa7.27□□□□□ -1.25
SF3A1-207ENST00000471342 MEOX2P50222 304 aa7.27□□□□□ -1.25
SF3A1-207ENST00000471342 DEFB131AP59861 70 aa7.27□□□□□ -1.25
SF3A1-207ENST00000471342 ERCC8Q13216 396 aa7.27□□□□□ -1.25
SF3A1-207ENST00000471342 KIR3DS1Q14943 382 aa7.27□□□□□ -1.25
SF3A1-207ENST00000471342 Q6ZQT7 251 aa7.27□□□□□ -1.25
SF3A1-207ENST00000471342 APRG1Q8IVJ8 170 aa7.27□□□□□ -1.25
SF3A1-207ENST00000471342 DYNLRB2Q8TF09 96 aa7.27□□□□□ -1.25
SF3A1-207ENST00000471342 PRR25Q96S07 402 aa7.27□□□□□ -1.25
SF3A1-207ENST00000471342 ASCL2Q99929 193 aa7.27□□□□□ -1.25
SF3A1-207ENST00000471342 SLC50A1Q9BRV3 221 aa7.27□□□□□ -1.25
SF3A1-207ENST00000471342 DERL1Q9BUN8 251 aa7.27□□□□□ -1.25
SF3A1-207ENST00000471342 MLST8Q9BVC4 326 aa7.27□□□□□ -1.25
SF3A1-207ENST00000471342 GPR61Q9BZJ8 451 aa7.27□□□□□ -1.25
SF3A1-207ENST00000471342 AGPAT4-IT1Q9H0P7 198 aa7.27□□□□□ -1.25
SF3A1-207ENST00000471342 SAV1Q9H4B6 383 aaPredicted RBP7.27□□□□□ -1.25
SF3A1-207ENST00000471342 PPP1R14DQ9NXH3 145 aa7.27□□□□□ -1.25
SF3A1-207ENST00000471342 MEGF8Q7Z7M0 2845 aa7.26□□□□□ -1.25
SF3A1-207ENST00000471342 IGKV2-40A0A087WW87 121 aaPredicted RBP7.26□□□□□ -1.25
SF3A1-207ENST00000471342 TRAV8-1A0A0A6YYK1 113 aa7.26□□□□□ -1.25
SF3A1-207ENST00000471342 RBFOX3A6NFN3 312 aa7.26□□□□□ -1.25
SF3A1-207ENST00000471342 NPIPB6E9PJ23 425 aa7.26□□□□□ -1.25
SF3A1-207ENST00000471342 K7EIL1 84 aa7.26□□□□□ -1.25
SF3A1-207ENST00000471342 CRXO43186 299 aaPredicted RBP7.26□□□□□ -1.25
SF3A1-207ENST00000471342 IGKV2D-40P01614 121 aaPredicted RBP7.26□□□□□ -1.25
SF3A1-207ENST00000471342 PRB2P02812 416 aaPredicted RBP7.26□□□□□ -1.25
SF3A1-207ENST00000471342 RBMY1A1P0DJD3 496 aaKnown RBP7.26□□□□□ -1.25
SF3A1-207ENST00000471342 RBMY1CP0DJD4 496 aa7.26□□□□□ -1.25
SF3A1-207ENST00000471342 CT45A10P0DMU9 189 aa7.26□□□□□ -1.25
SF3A1-207ENST00000471342 ADCYAP1P18509 176 aa7.26□□□□□ -1.25
SF3A1-207ENST00000471342 ATF4P18848 351 aaPredicted RBP7.26□□□□□ -1.25
SF3A1-207ENST00000471342 RBMY1FQ15415 496 aaKnown RBP7.26□□□□□ -1.25
SF3A1-207ENST00000471342 TOR2AQ5JU69 321 aa7.26□□□□□ -1.25
SF3A1-207ENST00000471342 PRR9Q5T870 116 aa7.26□□□□□ -1.25
SF3A1-207ENST00000471342 C9orf47Q6ZRZ4 202 aa7.26□□□□□ -1.25
SF3A1-207ENST00000471342 COX8CQ7Z4L0 72 aa7.26□□□□□ -1.25
SF3A1-207ENST00000471342 TRPT1Q86TN4 253 aaKnown RBP7.26□□□□□ -1.25
SF3A1-207ENST00000471342 DEFB125Q8N687 156 aa7.26□□□□□ -1.25
SF3A1-207ENST00000471342 OR8A1Q8NGG7 326 aa7.26□□□□□ -1.25
SF3A1-207ENST00000471342 C16orf92Q96LL3 132 aa7.26□□□□□ -1.25
SF3A1-207ENST00000471342 IGF2BP2-AS1Q96M15 143 aa7.26□□□□□ -1.25
SF3A1-207ENST00000471342 CLUHP3Q96NS8 147 aa7.26□□□□□ -1.25
SF3A1-207ENST00000471342 PFDN2Q9UHV9 154 aa7.26□□□□□ -1.25
SF3A1-207ENST00000471342 RNF24Q9Y225 148 aa7.26□□□□□ -1.25
SF3A1-207ENST00000471342 TRBV6-1A0A0K0K1D8 114 aa7.25□□□□□ -1.25
SF3A1-207ENST00000471342 A8MZ25 164 aa7.25□□□□□ -1.25
SF3A1-207ENST00000471342 CRIP1P50238 77 aa7.25□□□□□ -1.25
SF3A1-207ENST00000471342 PSMG4Q5JS54 123 aa7.25□□□□□ -1.25
SF3A1-207ENST00000471342 RBPMS2Q6ZRY4 209 aaKnown RBP7.25□□□□□ -1.25
SF3A1-207ENST00000471342 S100A7AQ86SG5 101 aa7.25□□□□□ -1.25
SF3A1-207ENST00000471342 ZFAND2AQ8N6M9 145 aa7.25□□□□□ -1.25
SF3A1-207ENST00000471342 CSNK1G2-AS1Q8NCQ2 148 aa7.25□□□□□ -1.25
SF3A1-207ENST00000471342 RXFP4Q8TDU9 374 aa7.25□□□□□ -1.25
SF3A1-207ENST00000471342 RPUSD4Q96CM3 377 aaKnown RBP7.25□□□□□ -1.25
SF3A1-207ENST00000471342 NARS2Q96I59 477 aaKnown RBP7.25□□□□□ -1.25
SF3A1-207ENST00000471342 MANBALQ9NQG1 85 aa7.25□□□□□ -1.25
SF3A1-207ENST00000471342 AURKAIP1Q9NWT8 199 aaPredicted RBP7.25□□□□□ -1.25
SF3A1-207ENST00000471342 VAX2Q9UIW0 290 aa7.25□□□□□ -1.25
SF3A1-207ENST00000471342 TRAV34A0A0B4J273 112 aa7.24□□□□□ -1.25
SF3A1-207ENST00000471342 RBAKDNA6NC62 111 aa7.24□□□□□ -1.25
SF3A1-207ENST00000471342 OR4C46A6NHA9 309 aa7.24□□□□□ -1.25
SF3A1-207ENST00000471342 C11orf94C9JXX5 98 aa7.24□□□□□ -1.25
SF3A1-207ENST00000471342 HLA-DRB4P13762 266 aa7.24□□□□□ -1.25
SF3A1-207ENST00000471342 BMI1P35226 326 aa7.24□□□□□ -1.25
SF3A1-207ENST00000471342 ZNF80P51504 273 aaPredicted RBP7.24□□□□□ -1.25
SF3A1-207ENST00000471342 CNN1P51911 297 aaKnown RBP7.24□□□□□ -1.25
SF3A1-207ENST00000471342 RPL11P62913 178 aaKnown RBP7.24□□□□□ -1.25
SF3A1-207ENST00000471342 PSG9Q00887 426 aa7.24□□□□□ -1.25
SF3A1-207ENST00000471342 MEF2BQ02080 365 aaPredicted RBP7.24□□□□□ -1.25
SF3A1-207ENST00000471342 GUCA2BQ16661 112 aa7.24□□□□□ -1.25
SF3A1-207ENST00000471342 C5orf17Q8NAS9 161 aa7.24□□□□□ -1.25
SF3A1-207ENST00000471342 SGK494Q96LW2 274 aa7.24□□□□□ -1.25
SF3A1-207ENST00000471342 LINC00052Q96N35 136 aa7.24□□□□□ -1.25
SF3A1-207ENST00000471342 PRELID1Q9Y255 219 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms