RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 UBE2CO00762 179 aa4.18□□□□□ -1.74
VPS36-202ENST00000462289 TAAR5O14804 337 aa4.18□□□□□ -1.74
VPS36-202ENST00000462289 NDUFB4O95168 129 aa4.18□□□□□ -1.74
VPS36-202ENST00000462289 SPP1P10451 314 aa4.18□□□□□ -1.74
VPS36-202ENST00000462289 GALR1P47211 349 aa4.18□□□□□ -1.74
VPS36-202ENST00000462289 GUK1Q16774 197 aa4.18□□□□□ -1.74
VPS36-202ENST00000462289 C10orf113Q5VZT2 155 aa4.18□□□□□ -1.74
VPS36-202ENST00000462289 LEMD1Q68G75 181 aa4.18□□□□□ -1.74
VPS36-202ENST00000462289 FOXI2Q6ZQN5 318 aa4.18□□□□□ -1.74
VPS36-202ENST00000462289 Q6ZRG5 221 aa4.18□□□□□ -1.74
VPS36-202ENST00000462289 RPP25LQ8N5L8 163 aaKnown RBP4.18□□□□□ -1.74
VPS36-202ENST00000462289 ARL6IP6Q8N6S5 226 aa4.18□□□□□ -1.74
VPS36-202ENST00000462289 ZNF709Q8N972 641 aa4.18□□□□□ -1.74
VPS36-202ENST00000462289 STOML3Q8TAV4 291 aa4.18□□□□□ -1.74
VPS36-202ENST00000462289 MRPL53Q96EL3 112 aaKnown RBP4.18□□□□□ -1.74
VPS36-202ENST00000462289 PBDC1Q9BVG4 233 aa4.18□□□□□ -1.74
VPS36-202ENST00000462289 SLC25A2Q9BXI2 301 aa4.18□□□□□ -1.74
VPS36-202ENST00000462289 SAV1Q9H4B6 383 aaPredicted RBP4.18□□□□□ -1.74
VPS36-202ENST00000462289 SRD5A3Q9H8P0 318 aa4.18□□□□□ -1.74
VPS36-202ENST00000462289 EDA2RQ9HAV5 297 aa4.18□□□□□ -1.74
VPS36-202ENST00000462289 ZNF586Q9NXT0 402 aa4.18□□□□□ -1.74
VPS36-202ENST00000462289 CLEC5AQ9NY25 188 aa4.18□□□□□ -1.74
VPS36-202ENST00000462289 SELENOKQ9Y6D0 94 aa4.18□□□□□ -1.74
VPS36-202ENST00000462289 TRBV19A0A075B6N1 114 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 LOC102724200A0A096LPH7 203 aaPredicted RBP4.17□□□□□ -1.74
VPS36-202ENST00000462289 A0A0J9YX75 114 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 ZNF705EA8MWA4 302 aaPredicted RBP4.17□□□□□ -1.74
VPS36-202ENST00000462289 C17orf112F2Z3M2 114 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 SLC17A3O00476 420 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 COX7A2P2O60397 106 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 C1QBP02746 253 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 ZNF688P0C7X2 276 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 HIST1H1EP10412 219 aaKnown RBP4.17□□□□□ -1.74
VPS36-202ENST00000462289 M6PRP20645 277 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 ATP6V0CP27449 155 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 DEFB131AP59861 70 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 SNRPD3P62318 126 aaKnown RBP4.17□□□□□ -1.74
VPS36-202ENST00000462289 TMEM41BQ5BJD5 291 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 GDF5OSQ5U4N7 250 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 RPL7L1Q6DKI1 246 aaKnown RBP4.17□□□□□ -1.74
VPS36-202ENST00000462289 LCN15Q6UWW0 184 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 BPIFA4PQ86YQ2 179 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 APRG1Q8IVJ8 170 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 GBGT1Q8N5D6 347 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 STXBP6Q8NFX7 210 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 RNF183Q96D59 192 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 FXYD5Q96DB9 178 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 FAM19A4Q96LR4 140 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 OVOL2Q9BRP0 275 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 SLC50A1Q9BRV3 221 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 C1orf43Q9BWL3 253 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 MFFQ9GZY8 342 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 PPP1R14DQ9NXH3 145 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 DOK5Q9P104 306 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 FUT9Q9Y231 359 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 RFNGQ9Y644 331 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 LYSTQ99698 3801 aa4.17□□□□□ -1.74
VPS36-202ENST00000462289 FXYD6-FXYD2A0A087WZ82 144 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 TRAV5A0A0B4J249 113 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 A0A0D9SG52 128 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 A0A1B0GVG6 124 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 SMLR1H3BR10 107 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 DNASE2O00115 360 aaPredicted RBP4.16□□□□□ -1.74
VPS36-202ENST00000462289 ARPC5O15511 151 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 IFNA5P01569 189 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 STAG3L2P0CL84 134 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 STAG3L3P0CL85 134 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 C4BPBP20851 252 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 CD300CQ08708 224 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 ZNF726P1Q15940 193 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 PSG3Q16557 428 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 LGALSLQ3ZCW2 172 aaPredicted RBP4.16□□□□□ -1.74
VPS36-202ENST00000462289 PSMG4Q5JS54 123 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 FAM78BQ5VT40 261 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 MORN3Q6PF18 240 aaPredicted RBP4.16□□□□□ -1.74
VPS36-202ENST00000462289 ZNF705AQ6ZN79 300 aaPredicted RBP4.16□□□□□ -1.74
VPS36-202ENST00000462289 PQLC2Q6ZP29 291 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 MIR17HGQ75NE6 70 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 LYPD1Q8N2G4 141 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 INO80EQ8NBZ0 244 aaPredicted RBP4.16□□□□□ -1.74
VPS36-202ENST00000462289 GNPNAT1Q96EK6 184 aaPredicted RBP4.16□□□□□ -1.74
VPS36-202ENST00000462289 ODF3Q96PU9 254 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 SMIM3Q9BZL3 60 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 SH3BGRL3Q9H299 93 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 SLC25A22Q9H936 323 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 RPRMQ9NS64 109 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 UBQLN2Q9UHD9 624 aa4.16□□□□□ -1.74
VPS36-202ENST00000462289 KMT2CQ8NEZ4 4911 aaKnown RBP4.16□□□□□ -1.74
VPS36-202ENST00000462289 PLECQ15149 4684 aaKnown RBP4.15□□□□□ -1.74
VPS36-202ENST00000462289 IGKV3-7A0A075B6H7 116 aa4.15□□□□□ -1.75
VPS36-202ENST00000462289 TRBV7-9A0A0J9YWB2 115 aa4.15□□□□□ -1.75
VPS36-202ENST00000462289 ZNF705FA8MVS1 300 aaPredicted RBP4.15□□□□□ -1.75
VPS36-202ENST00000462289 CRXO43186 299 aaPredicted RBP4.15□□□□□ -1.75
VPS36-202ENST00000462289 BCL2L11O43521 198 aa4.15□□□□□ -1.75
VPS36-202ENST00000462289 MBP02144 154 aa4.15□□□□□ -1.75
VPS36-202ENST00000462289 SEC11BP0C7V7 166 aa4.15□□□□□ -1.75
VPS36-202ENST00000462289 ZNF705DP0CH99 300 aaPredicted RBP4.15□□□□□ -1.75
VPS36-202ENST00000462289 ZNF705BP0CI00 300 aaPredicted RBP4.15□□□□□ -1.75
VPS36-202ENST00000462289 ID1P41134 155 aa4.15□□□□□ -1.75
VPS36-202ENST00000462289 TFPI2P48307 235 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms