RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-222	ENST00000461849	SUN5	Q8TC36	379 aa		10.17	□□□□□ -0.78
RBM39-222	ENST00000461849	RNF141	Q8WVD5	230 aa		10.17	□□□□□ -0.78
RBM39-222	ENST00000461849	SLC50A1	Q9BRV3	221 aa		10.17	□□□□□ -0.78
RBM39-222	ENST00000461849	MAP1LC3B	Q9GZQ8	125 aa		10.17	□□□□□ -0.78
RBM39-222	ENST00000461849	CLEC5A	Q9NY25	188 aa		10.17	□□□□□ -0.78
RBM39-222	ENST00000461849	TRAV1-1	A0A0B4J248	108 aa		10.16	□□□□□ -0.78
RBM39-222	ENST00000461849	NBEAP1	P0C6P0	100 aa		10.16	□□□□□ -0.78
RBM39-222	ENST00000461849	ARL14EPL	P0DKL9	152 aa		10.16	□□□□□ -0.78
RBM39-222	ENST00000461849	FHIT	P49789	147 aa		10.16	□□□□□ -0.78
RBM39-222	ENST00000461849	DEFB131A	P59861	70 aa		10.16	□□□□□ -0.78
RBM39-222	ENST00000461849	SNRPD3	P62318	126 aa	Known RBP	10.16	□□□□□ -0.78
RBM39-222	ENST00000461849	TEX261	Q6UWH6	196 aa		10.16	□□□□□ -0.78
RBM39-222	ENST00000461849	ALKAL2	Q6UX46	152 aa		10.16	□□□□□ -0.78
RBM39-222	ENST00000461849	SAT2	Q96F10	170 aa	Predicted RBP	10.16	□□□□□ -0.78
RBM39-222	ENST00000461849	KRTAP17-1	Q9BYP8	105 aa		10.16	□□□□□ -0.78
RBM39-222	ENST00000461849	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.16	□□□□□ -0.78
RBM39-222	ENST00000461849	TMEM167B	Q9NRX6	74 aa		10.16	□□□□□ -0.78
RBM39-222	ENST00000461849	ZNF586	Q9NXT0	402 aa		10.16	□□□□□ -0.78
RBM39-222	ENST00000461849	HMGB3	O15347	200 aa	Known RBP	10.15	□□□□□ -0.78
RBM39-222	ENST00000461849	H2AFB1	P0C5Y9	115 aa		10.15	□□□□□ -0.78
RBM39-222	ENST00000461849	OR10J4	P0C629	311 aa		10.15	□□□□□ -0.78
RBM39-222	ENST00000461849	GCHFR	P30047	84 aa		10.15	□□□□□ -0.78
RBM39-222	ENST00000461849	FAM74A1	Q5RGS3	127 aa		10.15	□□□□□ -0.78
RBM39-222	ENST00000461849	STH	Q8IWL8	128 aa		10.15	□□□□□ -0.78
RBM39-222	ENST00000461849	LYPD1	Q8N2G4	141 aa		10.15	□□□□□ -0.78
RBM39-222	ENST00000461849	LRRC20	Q8TCA0	184 aa		10.15	□□□□□ -0.78
RBM39-222	ENST00000461849	TRAV8-2	A0A0B4J237	113 aa		10.14	□□□□□ -0.79
RBM39-222	ENST00000461849	NUPR2	A6NF83	97 aa		10.14	□□□□□ -0.79
RBM39-222	ENST00000461849	EIF3G	O75821	320 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
RBM39-222	ENST00000461849	NDUFB4	O95168	129 aa		10.14	□□□□□ -0.79
RBM39-222	ENST00000461849	CA1	P00915	261 aa	Predicted RBP	10.14	□□□□□ -0.79
RBM39-222	ENST00000461849	IFNA7	P01567	189 aa		10.14	□□□□□ -0.79
RBM39-222	ENST00000461849	PSG9	Q00887	426 aa		10.14	□□□□□ -0.79
RBM39-222	ENST00000461849	ZNF680	Q8NEM1	530 aa		10.14	□□□□□ -0.79
RBM39-222	ENST00000461849	SFT2D1	Q8WV19	159 aa		10.14	□□□□□ -0.79
RBM39-222	ENST00000461849	C16orf92	Q96LL3	132 aa		10.14	□□□□□ -0.79
RBM39-222	ENST00000461849	RARRES2	Q99969	163 aa		10.14	□□□□□ -0.79
RBM39-222	ENST00000461849	ZNF705E	A8MWA4	302 aa	Predicted RBP	10.13	□□□□□ -0.79
RBM39-222	ENST00000461849	TEX46	H3BTG2	121 aa		10.13	□□□□□ -0.79
RBM39-222	ENST00000461849	SLC17A3	O00476	420 aa		10.13	□□□□□ -0.79
RBM39-222	ENST00000461849	HBE1	P02100	147 aa		10.13	□□□□□ -0.79
RBM39-222	ENST00000461849	BLOC1S1	P78537	153 aa		10.13	□□□□□ -0.79
RBM39-222	ENST00000461849	FAM24B	Q8N5W8	94 aa		10.13	□□□□□ -0.79
RBM39-222	ENST00000461849	ARL2-SNX15	V9GYD0	113 aa		10.13	□□□□□ -0.79
RBM39-222	ENST00000461849	ZNF688	P0C7X2	276 aa		10.12	□□□□□ -0.79
RBM39-222	ENST00000461849	PPT1	P50897	306 aa		10.12	□□□□□ -0.79
RBM39-222	ENST00000461849	FGF8	P55075	233 aa	Predicted RBP	10.12	□□□□□ -0.79
RBM39-222	ENST00000461849	OR11H2	Q8NH07	326 aa		10.12	□□□□□ -0.79
RBM39-222	ENST00000461849	BLNK	Q8WV28	456 aa		10.12	□□□□□ -0.79
RBM39-222	ENST00000461849	MRPL53	Q96EL3	112 aa	Known RBP	10.12	□□□□□ -0.79
RBM39-222	ENST00000461849	AAMDC	Q9H7C9	122 aa		10.12	□□□□□ -0.79
RBM39-222	ENST00000461849	PRELID1	Q9Y255	219 aa		10.12	□□□□□ -0.79
RBM39-222	ENST00000461849	KLK5	Q9Y337	293 aa	Predicted RBP	10.12	□□□□□ -0.79
RBM39-222	ENST00000461849		H3BTX0	84 aa		10.11	□□□□□ -0.79
RBM39-222	ENST00000461849	SNRPC	P09234	159 aa	Known RBP	10.11	□□□□□ -0.79
RBM39-222	ENST00000461849	PSMG4	Q5JS54	123 aa		10.11	□□□□□ -0.79
RBM39-222	ENST00000461849	ARL6IP6	Q8N6S5	226 aa		10.11	□□□□□ -0.79
RBM39-222	ENST00000461849	ALMS1	Q8TCU4	4167 aa		10.11	□□□□□ -0.79
RBM39-222	ENST00000461849		A0A1W2PRE2	83 aa		10.1	□□□□□ -0.79
RBM39-222	ENST00000461849	PSG3	Q16557	428 aa		10.1	□□□□□ -0.79
RBM39-222	ENST00000461849	CEMP1	Q6PRD7	247 aa	Predicted RBP	10.1	□□□□□ -0.79
RBM39-222	ENST00000461849	IQCF2	Q8IXL9	164 aa		10.1	□□□□□ -0.79
RBM39-222	ENST00000461849	RNF182	Q8N6D2	247 aa		10.1	□□□□□ -0.79
RBM39-222	ENST00000461849	LYPD6B	Q8NI32	183 aa		10.1	□□□□□ -0.79
RBM39-222	ENST00000461849	C20orf173	Q96LM9	149 aa		10.1	□□□□□ -0.79
RBM39-222	ENST00000461849	LINC00052	Q96N35	136 aa		10.1	□□□□□ -0.79
RBM39-222	ENST00000461849	NKX6-2	Q9C056	277 aa	Predicted RBP	10.1	□□□□□ -0.79
RBM39-222	ENST00000461849		Q9H3A6	140 aa		10.1	□□□□□ -0.79
RBM39-222	ENST00000461849	TMPRSS5	Q9H3S3	457 aa		10.1	□□□□□ -0.79
RBM39-222	ENST00000461849	OTOR	Q9NRC9	128 aa		10.1	□□□□□ -0.79
RBM39-222	ENST00000461849	EPPK1	P58107	5090 aa	Known RBP	10.09	□□□□□ -0.79
RBM39-222	ENST00000461849	LY6G6C	O95867	125 aa		10.09	□□□□□ -0.79
RBM39-222	ENST00000461849	RAN	P62826	216 aa	Known RBP	10.09	□□□□□ -0.79
RBM39-222	ENST00000461849	MORN3	Q6PF18	240 aa	Predicted RBP	10.09	□□□□□ -0.79
RBM39-222	ENST00000461849	FOXI2	Q6ZQN5	318 aa		10.09	□□□□□ -0.79
RBM39-222	ENST00000461849	ZNF767P	Q75MW2	155 aa		10.09	□□□□□ -0.79
RBM39-222	ENST00000461849	ZNF738	Q8NE65	137 aa		10.09	□□□□□ -0.79
RBM39-222	ENST00000461849	ICAM4	Q14773	271 aa		10.08	□□□□□ -0.8
RBM39-222	ENST00000461849	ACTL10	Q5JWF8	245 aa		10.08	□□□□□ -0.8
RBM39-222	ENST00000461849	IGFL4	Q6B9Z1	124 aa		10.08	□□□□□ -0.8
RBM39-222	ENST00000461849	EXOC3-AS1	Q8N2X6	119 aa		10.08	□□□□□ -0.8
RBM39-222	ENST00000461849	C11orf45	Q8TAV5	145 aa		10.08	□□□□□ -0.8
RBM39-222	ENST00000461849	RXFP4	Q8TDU9	374 aa		10.08	□□□□□ -0.8
RBM39-222	ENST00000461849	TCEAL7	Q9BRU2	100 aa		10.08	□□□□□ -0.8
RBM39-222	ENST00000461849	C11orf68	Q9H3H3	251 aa	Known RBP	10.08	□□□□□ -0.8
RBM39-222	ENST00000461849	SAV1	Q9H4B6	383 aa	Predicted RBP	10.08	□□□□□ -0.8
RBM39-222	ENST00000461849	MANBAL	Q9NQG1	85 aa		10.08	□□□□□ -0.8
RBM39-222	ENST00000461849	FAM74A7	A6NL05	159 aa		10.07	□□□□□ -0.8
RBM39-222	ENST00000461849	KNCN	A6PVL3	124 aa		10.07	□□□□□ -0.8
RBM39-222	ENST00000461849	GGTLC3	B5MD39	225 aa		10.07	□□□□□ -0.8
RBM39-222	ENST00000461849	HLA-DRB4	P13762	266 aa		10.07	□□□□□ -0.8
RBM39-222	ENST00000461849	HLA-DMB	P28068	263 aa		10.07	□□□□□ -0.8
RBM39-222	ENST00000461849	TAGLN2	P37802	199 aa	Known RBP	10.07	□□□□□ -0.8
RBM39-222	ENST00000461849	IFITM2	Q01629	132 aa		10.07	□□□□□ -0.8
RBM39-222	ENST00000461849	TRPT1	Q86TN4	253 aa	Known RBP	10.07	□□□□□ -0.8
RBM39-222	ENST00000461849	C5orf17	Q8NAS9	161 aa		10.07	□□□□□ -0.8
RBM39-222	ENST00000461849	PHLDA1	Q8WV24	401 aa	Predicted RBP	10.07	□□□□□ -0.8
RBM39-222	ENST00000461849	LINC00476	Q8WZB0	136 aa		10.07	□□□□□ -0.8
RBM39-222	ENST00000461849	RPUSD4	Q96CM3	377 aa	Known RBP	10.07	□□□□□ -0.8
RBM39-222	ENST00000461849	CLUHP3	Q96NS8	147 aa		10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms