RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 MPDU1O75352 247 aa7.83□□□□□ -1.16
NPIPB3-202ENST00000448012 FGF7P21781 194 aa7.83□□□□□ -1.16
NPIPB3-202ENST00000448012 CDKN1BP46527 198 aa7.83□□□□□ -1.16
NPIPB3-202ENST00000448012 RPL29P47914 159 aaKnown RBP7.83□□□□□ -1.16
NPIPB3-202ENST00000448012 TAS2R60P59551 318 aa7.83□□□□□ -1.16
NPIPB3-202ENST00000448012 CYCSP99999 105 aaKnown RBP7.83□□□□□ -1.16
NPIPB3-202ENST00000448012 IFITM2Q01629 132 aa7.83□□□□□ -1.16
NPIPB3-202ENST00000448012 RAB32Q13637 225 aa7.83□□□□□ -1.16
NPIPB3-202ENST00000448012 OPCMLQ14982 345 aa7.83□□□□□ -1.16
NPIPB3-202ENST00000448012 MIC13Q5XKP0 118 aa7.83□□□□□ -1.16
NPIPB3-202ENST00000448012 CCDC28AQ8IWP9 274 aa7.83□□□□□ -1.16
NPIPB3-202ENST00000448012 TMEM252Q8N6L7 170 aa7.83□□□□□ -1.16
NPIPB3-202ENST00000448012 ZNF331Q9NQX6 463 aaPredicted RBP7.83□□□□□ -1.16
NPIPB3-202ENST00000448012 KCNIP2Q9NS61 270 aa7.83□□□□□ -1.16
NPIPB3-202ENST00000448012 SLC39A9Q9NUM3 307 aa7.83□□□□□ -1.16
NPIPB3-202ENST00000448012 FXYD6-FXYD2A0A087WZ82 144 aa7.82□□□□□ -1.16
NPIPB3-202ENST00000448012 HMSDA8MTL9 139 aa7.82□□□□□ -1.16
NPIPB3-202ENST00000448012 DEFB130BP0DP73 79 aa7.82□□□□□ -1.16
NPIPB3-202ENST00000448012 DEFB130AP0DP74 79 aa7.82□□□□□ -1.16
NPIPB3-202ENST00000448012 LEPP41159 167 aa7.82□□□□□ -1.16
NPIPB3-202ENST00000448012 PRR20EP86478 221 aa7.82□□□□□ -1.16
NPIPB3-202ENST00000448012 PRR20CP86479 221 aa7.82□□□□□ -1.16
NPIPB3-202ENST00000448012 PRR20DP86480 221 aa7.82□□□□□ -1.16
NPIPB3-202ENST00000448012 PRR20BP86481 221 aa7.82□□□□□ -1.16
NPIPB3-202ENST00000448012 PRR20AP86496 221 aa7.82□□□□□ -1.16
NPIPB3-202ENST00000448012 ZNF493Q6ZR52 646 aa7.82□□□□□ -1.16
NPIPB3-202ENST00000448012 TMEM37Q8WXS4 190 aa7.82□□□□□ -1.16
NPIPB3-202ENST00000448012 C16orf74Q96GX8 76 aa7.82□□□□□ -1.16
NPIPB3-202ENST00000448012 C17orf77Q96MU5 243 aa7.82□□□□□ -1.16
NPIPB3-202ENST00000448012 C20orf144Q9BQM9 153 aa7.82□□□□□ -1.16
NPIPB3-202ENST00000448012 TIMM9Q9Y5J7 89 aa7.82□□□□□ -1.16
NPIPB3-202ENST00000448012 IGSF23A1L1A6 192 aa7.81□□□□□ -1.16
NPIPB3-202ENST00000448012 E5RGE8 158 aa7.81□□□□□ -1.16
NPIPB3-202ENST00000448012 H7BYZ3 331 aa7.81□□□□□ -1.16
NPIPB3-202ENST00000448012 SNRPCP09234 159 aaKnown RBP7.81□□□□□ -1.16
NPIPB3-202ENST00000448012 PET100P0DJ07 73 aa7.81□□□□□ -1.16
NPIPB3-202ENST00000448012 VWC2Q2TAL6 325 aa7.81□□□□□ -1.16
NPIPB3-202ENST00000448012 LRRC37A5PQ49AS3 106 aa7.81□□□□□ -1.16
NPIPB3-202ENST00000448012 Q5BKY6 102 aa7.81□□□□□ -1.16
NPIPB3-202ENST00000448012 LINC00336Q6ZUF6 198 aa7.81□□□□□ -1.16
NPIPB3-202ENST00000448012 C15orf53Q8NAA6 179 aa7.81□□□□□ -1.16
NPIPB3-202ENST00000448012 ATG101Q9BSB4 218 aa7.81□□□□□ -1.16
NPIPB3-202ENST00000448012 NMES1Q9C002 83 aa7.81□□□□□ -1.16
NPIPB3-202ENST00000448012 AAMDCQ9H7C9 122 aa7.81□□□□□ -1.16
NPIPB3-202ENST00000448012 TIMM8BQ9Y5J9 83 aaPredicted RBP7.81□□□□□ -1.16
NPIPB3-202ENST00000448012 LYSTQ99698 3801 aa7.81□□□□□ -1.16
NPIPB3-202ENST00000448012 C17orf112F2Z3M2 114 aa7.8□□□□□ -1.16
NPIPB3-202ENST00000448012 F5H768 121 aa7.8□□□□□ -1.16
NPIPB3-202ENST00000448012 H3BTX0 84 aa7.8□□□□□ -1.16
NPIPB3-202ENST00000448012 MRPS12O15235 138 aaKnown RBP7.8□□□□□ -1.16
NPIPB3-202ENST00000448012 CRXO43186 299 aaPredicted RBP7.8□□□□□ -1.16
NPIPB3-202ENST00000448012 ZNF253O75346 499 aa7.8□□□□□ -1.16
NPIPB3-202ENST00000448012 ATP5G1P05496 136 aa7.8□□□□□ -1.16
NPIPB3-202ENST00000448012 ATP5G3P48201 142 aa7.8□□□□□ -1.16
NPIPB3-202ENST00000448012 NDUFA5Q16718 116 aa7.8□□□□□ -1.16
NPIPB3-202ENST00000448012 LGALSLQ3ZCW2 172 aaPredicted RBP7.8□□□□□ -1.16
NPIPB3-202ENST00000448012 SOHLH1Q5JUK2 328 aa7.8□□□□□ -1.16
NPIPB3-202ENST00000448012 PRELID1Q9Y255 219 aa7.8□□□□□ -1.16
NPIPB3-202ENST00000448012 TRAV5A0A0B4J249 113 aa7.79□□□□□ -1.16
NPIPB3-202ENST00000448012 SNURFLB1AK76 121 aa7.79□□□□□ -1.16
NPIPB3-202ENST00000448012 ARPC5O15511 151 aa7.79□□□□□ -1.16
NPIPB3-202ENST00000448012 IGLC2P0DOY2 106 aa7.79□□□□□ -1.16
NPIPB3-202ENST00000448012 HIST1H1EP10412 219 aaKnown RBP7.79□□□□□ -1.16
NPIPB3-202ENST00000448012 RNF212Q495C1 297 aa7.79□□□□□ -1.16
NPIPB3-202ENST00000448012 TMEM88Q6PEY1 159 aa7.79□□□□□ -1.16
NPIPB3-202ENST00000448012 OR5C1Q8NGR4 320 aa7.79□□□□□ -1.16
NPIPB3-202ENST00000448012 THAP6Q8TBB0 222 aa7.79□□□□□ -1.16
NPIPB3-202ENST00000448012 TMEM263Q8WUH6 116 aaKnown RBP7.79□□□□□ -1.16
NPIPB3-202ENST00000448012 PPP1R1CQ8WVI7 109 aa7.79□□□□□ -1.16
NPIPB3-202ENST00000448012 MRPL53Q96EL3 112 aaKnown RBP7.79□□□□□ -1.16
NPIPB3-202ENST00000448012 C11orf1Q9H5F2 150 aa7.79□□□□□ -1.16
NPIPB3-202ENST00000448012 PLECQ15149 4684 aaKnown RBP7.79□□□□□ -1.16
NPIPB3-202ENST00000448012 CBY3A6NI87 242 aa7.78□□□□□ -1.16
NPIPB3-202ENST00000448012 H3BQ15 152 aa7.78□□□□□ -1.16
NPIPB3-202ENST00000448012 J3KRW8 73 aa7.78□□□□□ -1.16
NPIPB3-202ENST00000448012 SLC17A3O00476 420 aa7.78□□□□□ -1.16
NPIPB3-202ENST00000448012 ATP6V1G1O75348 118 aa7.78□□□□□ -1.16
NPIPB3-202ENST00000448012 MPC2O95563 127 aa7.78□□□□□ -1.16
NPIPB3-202ENST00000448012 IL15RAQ13261 267 aa7.78□□□□□ -1.16
NPIPB3-202ENST00000448012 PDE6HQ13956 83 aa7.78□□□□□ -1.16
NPIPB3-202ENST00000448012 ZNF345Q14585 488 aa7.78□□□□□ -1.16
NPIPB3-202ENST00000448012 CLINT1Q14677 625 aa7.78□□□□□ -1.16
NPIPB3-202ENST00000448012 MORN5Q5VZ52 161 aa7.78□□□□□ -1.16
NPIPB3-202ENST00000448012 BLNKQ8WV28 456 aa7.78□□□□□ -1.16
NPIPB3-202ENST00000448012 SAT2Q96F10 170 aaPredicted RBP7.78□□□□□ -1.16
NPIPB3-202ENST00000448012 ODF3Q96PU9 254 aa7.78□□□□□ -1.16
NPIPB3-202ENST00000448012 NPCDR1Q9BY65 106 aa7.78□□□□□ -1.16
NPIPB3-202ENST00000448012 TMEM14CQ9P0S9 112 aa7.78□□□□□ -1.16
NPIPB3-202ENST00000448012 MBD2Q9UBB5 411 aa7.78□□□□□ -1.16
NPIPB3-202ENST00000448012 TNFSF18Q9UNG2 199 aa7.78□□□□□ -1.16
NPIPB3-202ENST00000448012 TRBV19A0A075B6N1 114 aa7.77□□□□□ -1.17
NPIPB3-202ENST00000448012 A0A0D9SG52 128 aa7.77□□□□□ -1.17
NPIPB3-202ENST00000448012 M0R2N4 97 aa7.77□□□□□ -1.17
NPIPB3-202ENST00000448012 NUDT3O95989 172 aa7.77□□□□□ -1.17
NPIPB3-202ENST00000448012 IFNA5P01569 189 aa7.77□□□□□ -1.17
NPIPB3-202ENST00000448012 AZU1P20160 251 aa7.77□□□□□ -1.17
NPIPB3-202ENST00000448012 FAM3BP58499 235 aaPredicted RBP7.77□□□□□ -1.17
NPIPB3-202ENST00000448012 NHLH2Q02577 135 aa7.77□□□□□ -1.17
NPIPB3-202ENST00000448012 TMUB2Q71RG4 321 aa7.77□□□□□ -1.17
NPIPB3-202ENST00000448012 SCGB1C1Q8TD33 95 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms