RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 SIVA1O15304 175 aa6.34□□□□□ -1.39
CCDC39-201ENST00000442201 CRISP2P16562 243 aa6.34□□□□□ -1.39
CCDC39-201ENST00000442201 IER3P46695 156 aa6.34□□□□□ -1.39
CCDC39-201ENST00000442201 HIST1H1AQ02539 215 aaPredicted RBP6.34□□□□□ -1.39
CCDC39-201ENST00000442201 ECSCRQ19T08 205 aa6.34□□□□□ -1.39
CCDC39-201ENST00000442201 KIAA1644Q3SXP7 199 aa6.34□□□□□ -1.39
CCDC39-201ENST00000442201 MUC21Q5SSG8 566 aa6.34□□□□□ -1.39
CCDC39-201ENST00000442201 OR10G9Q8NGN4 311 aa6.34□□□□□ -1.39
CCDC39-201ENST00000442201 OR10G7Q8NGN6 311 aa6.34□□□□□ -1.39
CCDC39-201ENST00000442201 ZNF418Q8TF45 676 aaPredicted RBP6.34□□□□□ -1.39
CCDC39-201ENST00000442201 ZFP92A6NM28 416 aa6.34□□□□□ -1.39
CCDC39-201ENST00000442201 RPP25LQ8N5L8 163 aaKnown RBP6.34□□□□□ -1.39
CCDC39-201ENST00000442201 TMEM116Q8NCL8 245 aa6.34□□□□□ -1.39
CCDC39-201ENST00000442201 BLNKQ8WV28 456 aa6.34□□□□□ -1.39
CCDC39-201ENST00000442201 SAMD10Q9BYL1 202 aa6.34□□□□□ -1.39
CCDC39-201ENST00000442201 IGLV11-55A0A075B6I3 123 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 IGHV3-21A0A0B4J1V1 117 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 I3L2K1 104 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 IGLL1P15814 213 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 Q6YL49 198 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 STPG3Q8N7X2 389 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 FAM110DQ8TAY7 271 aaPredicted RBP6.33□□□□□ -1.4
CCDC39-201ENST00000442201 KCNS1Q96KK3 526 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 FANCD2OSQ96PS1 177 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 ST20Q9HBF5 79 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 SLC39A9Q9NUM3 307 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 MRPL36Q9P0J6 103 aaKnown RBP6.33□□□□□ -1.4
CCDC39-201ENST00000442201 NBPF19A0A087WUL8 3843 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 FLNAP21333 2647 aaKnown RBP6.33□□□□□ -1.4
CCDC39-201ENST00000442201 LINC01548A6NM66 108 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 ARL3P36405 182 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 ID1P41134 155 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 PRR20EP86478 221 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 PRR20CP86479 221 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 PRR20DP86480 221 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 PRR20BP86481 221 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 PRR20AP86496 221 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 OR10J3Q5JRS4 329 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 THAP8Q8NA92 274 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 CSMD1Q96PZ7 3565 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 SVEP1Q4LDE5 3571 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 C9orf118A6NHY6 69 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 K7EIM0 57 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 IGHG2P01859 326 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 KRTAP1-1Q07627 177 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 GAGE5Q13069 117 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 GAGE6Q13070 117 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 ZNF726P1Q15940 193 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 LCN15Q6UWW0 184 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 BOD1L2Q8IYS8 172 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 TNFRSF19Q9NS68 423 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 VPREB3Q9UKI3 123 aa6.33□□□□□ -1.4
CCDC39-201ENST00000442201 CELSR1Q9NYQ6 3014 aa6.32□□□□□ -1.4
CCDC39-201ENST00000442201 CTXND1A0A1B0GTU2 59 aa6.32□□□□□ -1.4
CCDC39-201ENST00000442201 TCRBV4S1A1TA0A5B7 111 aa6.32□□□□□ -1.4
CCDC39-201ENST00000442201 FAM231BA6NCW3 169 aa6.32□□□□□ -1.4
CCDC39-201ENST00000442201 G3V318 75 aa6.32□□□□□ -1.4
CCDC39-201ENST00000442201 NUDT3O95989 172 aa6.32□□□□□ -1.4
CCDC39-201ENST00000442201 BLCAPP62952 87 aa6.32□□□□□ -1.4
CCDC39-201ENST00000442201 GCSAMLQ5JQS6 135 aa6.32□□□□□ -1.4
CCDC39-201ENST00000442201 LCNL1Q6ZST4 164 aa6.32□□□□□ -1.4
CCDC39-201ENST00000442201 IL17RELQ6ZVW7 336 aa6.32□□□□□ -1.4
CCDC39-201ENST00000442201 CHRDL1Q9BU40 450 aa6.32□□□□□ -1.4
CCDC39-201ENST00000442201 SLC25A22Q9H936 323 aa6.32□□□□□ -1.4
CCDC39-201ENST00000442201 TSSC4Q9Y5U2 329 aaPredicted RBP6.32□□□□□ -1.4
CCDC39-201ENST00000442201 TRAV41A0A0B4J266 112 aa6.32□□□□□ -1.4
CCDC39-201ENST00000442201 IFNA1P01562 189 aa6.32□□□□□ -1.4
CCDC39-201ENST00000442201 GATA2P23769 480 aaPredicted RBP6.32□□□□□ -1.4
CCDC39-201ENST00000442201 CRIP2P52943 208 aaPredicted RBP6.32□□□□□ -1.4
CCDC39-201ENST00000442201 SEC11AP67812 179 aa6.32□□□□□ -1.4
CCDC39-201ENST00000442201 FAM78BQ5VT40 261 aa6.32□□□□□ -1.4
CCDC39-201ENST00000442201 JMJD8Q96S16 334 aa6.32□□□□□ -1.4
CCDC39-201ENST00000442201 TRGV9Q99603 122 aa6.32□□□□□ -1.4
CCDC39-201ENST00000442201 ZNF355PQ9NSJ1 428 aa6.32□□□□□ -1.4
CCDC39-201ENST00000442201 TEX15Q9BXT5 2789 aa6.32□□□□□ -1.4
CCDC39-201ENST00000442201 TLN2Q9Y4G6 2542 aa6.32□□□□□ -1.4
CCDC39-201ENST00000442201 IGKV1D-37A0A075B6S9 117 aa6.31□□□□□ -1.4
CCDC39-201ENST00000442201 A0A1W2PS18 150 aa6.31□□□□□ -1.4
CCDC39-201ENST00000442201 A4D1N5 150 aa6.31□□□□□ -1.4
CCDC39-201ENST00000442201 F2Z2F3 143 aa6.31□□□□□ -1.4
CCDC39-201ENST00000442201 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.31□□□□□ -1.4
CCDC39-201ENST00000442201 H3BRM9 83 aa6.31□□□□□ -1.4
CCDC39-201ENST00000442201 HOXA3O43365 443 aaPredicted RBP6.31□□□□□ -1.4
CCDC39-201ENST00000442201 OR2J3O76001 311 aa6.31□□□□□ -1.4
CCDC39-201ENST00000442201 IGF1P05019 195 aa6.31□□□□□ -1.4
CCDC39-201ENST00000442201 GNG4P50150 75 aa6.31□□□□□ -1.4
CCDC39-201ENST00000442201 MEF2BQ02080 365 aaPredicted RBP6.31□□□□□ -1.4
CCDC39-201ENST00000442201 SPATA31B1PQ5VZV4 182 aa6.31□□□□□ -1.4
CCDC39-201ENST00000442201 TEX48A0A1B0GUV7 120 aa6.31□□□□□ -1.4
CCDC39-201ENST00000442201 PGPEP1LA6NFU8 196 aa6.31□□□□□ -1.4
CCDC39-201ENST00000442201 ZNF324O75467 553 aaPredicted RBP6.31□□□□□ -1.4
CCDC39-201ENST00000442201 MFAP4P55083 255 aa6.31□□□□□ -1.4
CCDC39-201ENST00000442201 ZNF90Q03938 601 aa6.31□□□□□ -1.4
CCDC39-201ENST00000442201 GLMPQ8WWB7 406 aa6.31□□□□□ -1.4
CCDC39-201ENST00000442201 LINC00527Q9UJ94 153 aa6.31□□□□□ -1.4
CCDC39-201ENST00000442201 TRBV9A0A0B4J1U6 114 aa6.31□□□□□ -1.4
CCDC39-201ENST00000442201 C7orf71A4D174 169 aa6.31□□□□□ -1.4
CCDC39-201ENST00000442201 OR10G8Q8NGN5 311 aa6.31□□□□□ -1.4
CCDC39-201ENST00000442201 C19orf24Q9BVV8 132 aa6.31□□□□□ -1.4
CCDC39-201ENST00000442201 C21orf62Q9NYP8 219 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms