RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 IFI27P40305 119 aaPredicted RBP6.8□□□□□ -1.32
HPS4-206ENST00000439453 Q71RC1 249 aaPredicted RBP6.8□□□□□ -1.32
HPS4-206ENST00000439453 PRNTQ86SH4 94 aa6.8□□□□□ -1.32
HPS4-206ENST00000439453 FLYWCH2Q96CP2 140 aaKnown RBP6.8□□□□□ -1.32
HPS4-206ENST00000439453 GOSR1O95249 250 aa6.79□□□□□ -1.32
HPS4-206ENST00000439453 NMUP48645 174 aa6.79□□□□□ -1.32
HPS4-206ENST00000439453 LOXL1Q08397 574 aaPredicted RBP6.79□□□□□ -1.32
HPS4-206ENST00000439453 ZNF833PQ6ZTB9 187 aa6.79□□□□□ -1.32
HPS4-206ENST00000439453 GATD1Q8NB37 220 aa6.79□□□□□ -1.32
HPS4-206ENST00000439453 C1orf162Q8NEQ5 155 aaPredicted RBP6.79□□□□□ -1.32
HPS4-206ENST00000439453 TMEM167AQ8TBQ9 72 aa6.79□□□□□ -1.32
HPS4-206ENST00000439453 SRSF12Q8WXF0 261 aaKnown RBP6.79□□□□□ -1.32
HPS4-206ENST00000439453 PPIAL4GP0DN37 164 aa6.79□□□□□ -1.32
HPS4-206ENST00000439453 COX6B1P14854 86 aa6.79□□□□□ -1.32
HPS4-206ENST00000439453 RUSC1-AS1Q66K80 236 aa6.79□□□□□ -1.32
HPS4-206ENST00000439453 TNFRSF14Q92956 283 aa6.79□□□□□ -1.32
HPS4-206ENST00000439453 LINC00574Q9H8X3 128 aa6.79□□□□□ -1.32
HPS4-206ENST00000439453 INSIG2Q9Y5U4 225 aa6.79□□□□□ -1.32
HPS4-206ENST00000439453 ANKRD17O75179 2603 aaKnown RBP6.79□□□□□ -1.32
HPS4-206ENST00000439453 NDUFS8O00217 210 aa6.79□□□□□ -1.32
HPS4-206ENST00000439453 SPRY3O43610 288 aa6.79□□□□□ -1.32
HPS4-206ENST00000439453 CACNG7P62955 275 aa6.79□□□□□ -1.32
HPS4-206ENST00000439453 DEFB108BQ8NET1 73 aa6.79□□□□□ -1.32
HPS4-206ENST00000439453 LOC389332A0A1B0GUA5 103 aa6.78□□□□□ -1.32
HPS4-206ENST00000439453 C16orf97H3BN30 126 aa6.78□□□□□ -1.32
HPS4-206ENST00000439453 IGLV2-11P01706 119 aa6.78□□□□□ -1.32
HPS4-206ENST00000439453 MEF2CQ06413 473 aaPredicted RBP6.78□□□□□ -1.32
HPS4-206ENST00000439453 PRSS57Q6UWY2 283 aa6.78□□□□□ -1.32
HPS4-206ENST00000439453 GOLT1AQ6ZVE7 132 aa6.78□□□□□ -1.32
HPS4-206ENST00000439453 OTORQ9NRC9 128 aa6.78□□□□□ -1.32
HPS4-206ENST00000439453 ZNF785A8K8V0 405 aa6.78□□□□□ -1.32
HPS4-206ENST00000439453 TMEM30BQ3MIR4 351 aa6.78□□□□□ -1.32
HPS4-206ENST00000439453 SAMD5Q5TGI4 173 aa6.78□□□□□ -1.32
HPS4-206ENST00000439453 GAFA1Q96PS6 74 aa6.78□□□□□ -1.32
HPS4-206ENST00000439453 TRGV9Q99603 122 aa6.78□□□□□ -1.32
HPS4-206ENST00000439453 CCL13Q99616 98 aa6.78□□□□□ -1.32
HPS4-206ENST00000439453 POLQO75417 2590 aa6.78□□□□□ -1.32
HPS4-206ENST00000439453 A0A1B0GW15 77 aa6.78□□□□□ -1.32
HPS4-206ENST00000439453 PCP2Q8IVA1 136 aa6.78□□□□□ -1.32
HPS4-206ENST00000439453 SIGLEC8Q9NYZ4 499 aa6.78□□□□□ -1.32
HPS4-206ENST00000439453 SLC25A15Q9Y619 301 aa6.78□□□□□ -1.32
HPS4-206ENST00000439453 TEX48A0A1B0GUV7 120 aa6.77□□□□□ -1.33
HPS4-206ENST00000439453 GCSHP23434 173 aa6.77□□□□□ -1.33
HPS4-206ENST00000439453 TIMM23BQ5SRD1 257 aa6.77□□□□□ -1.33
HPS4-206ENST00000439453 FAM216BQ8N7L0 139 aa6.77□□□□□ -1.33
HPS4-206ENST00000439453 OR10X1Q8NGY0 326 aa6.77□□□□□ -1.33
HPS4-206ENST00000439453 IGFBPL1Q8WX77 278 aa6.77□□□□□ -1.33
HPS4-206ENST00000439453 PLXNB1O43157 2135 aa6.77□□□□□ -1.33
HPS4-206ENST00000439453 PPIAL4CA0A0B4J2A2 164 aa6.77□□□□□ -1.33
HPS4-206ENST00000439453 CRYGCP07315 174 aa6.77□□□□□ -1.33
HPS4-206ENST00000439453 SMIM13P0DJ93 91 aa6.77□□□□□ -1.33
HPS4-206ENST00000439453 SCGB1A1P11684 91 aa6.77□□□□□ -1.33
HPS4-206ENST00000439453 AZU1P20160 251 aa6.77□□□□□ -1.33
HPS4-206ENST00000439453 TM4SF20Q53R12 229 aa6.77□□□□□ -1.33
HPS4-206ENST00000439453 EXOC3-AS1Q8N2X6 119 aa6.77□□□□□ -1.33
HPS4-206ENST00000439453 C8orf46Q8TAG6 207 aa6.77□□□□□ -1.33
HPS4-206ENST00000439453 NRGNQ92686 78 aa6.77□□□□□ -1.33
HPS4-206ENST00000439453 RNF7Q9UBF6 113 aa6.77□□□□□ -1.33
HPS4-206ENST00000439453 F11RQ9Y624 299 aaKnown RBP6.77□□□□□ -1.33
HPS4-206ENST00000439453 A0A1W2PPI3 338 aa6.77□□□□□ -1.33
HPS4-206ENST00000439453 ZNF414Q96IQ9 312 aa6.77□□□□□ -1.33
HPS4-206ENST00000439453 GTSF1LQ9H1H1 148 aa6.77□□□□□ -1.33
HPS4-206ENST00000439453 CADP27708 2225 aa6.76□□□□□ -1.33
HPS4-206ENST00000439453 WNK2Q9Y3S1 2297 aa6.76□□□□□ -1.33
HPS4-206ENST00000439453 D6R8Y8 96 aa6.76□□□□□ -1.33
HPS4-206ENST00000439453 HOXB4P17483 251 aaPredicted RBP6.76□□□□□ -1.33
HPS4-206ENST00000439453 FXYD7P58549 80 aa6.76□□□□□ -1.33
HPS4-206ENST00000439453 HCP5Q6MZN7 132 aa6.76□□□□□ -1.33
HPS4-206ENST00000439453 OR4C13Q8NGP0 309 aa6.76□□□□□ -1.33
HPS4-206ENST00000439453 SIGMAR1Q99720 223 aa6.76□□□□□ -1.33
HPS4-206ENST00000439453 TRBV6-1A0A0K0K1D8 114 aa6.76□□□□□ -1.33
HPS4-206ENST00000439453 TMEM189A5PLL7 270 aa6.76□□□□□ -1.33
HPS4-206ENST00000439453 PRELID3AQ96N28 172 aa6.76□□□□□ -1.33
HPS4-206ENST00000439453 ASCL2Q99929 193 aa6.76□□□□□ -1.33
HPS4-206ENST00000439453 HIGD1AQ9Y241 93 aa6.76□□□□□ -1.33
HPS4-206ENST00000439453 ZFHX3Q15911 3703 aa6.76□□□□□ -1.33
HPS4-206ENST00000439453 IGHV3-21A0A0B4J1V1 117 aa6.76□□□□□ -1.33
HPS4-206ENST00000439453 IGLV2-23P01705 113 aa6.76□□□□□ -1.33
HPS4-206ENST00000439453 CT45A10P0DMU9 189 aa6.76□□□□□ -1.33
HPS4-206ENST00000439453 HBDP02042 147 aa6.75□□□□□ -1.33
HPS4-206ENST00000439453 FCGR2BP31994 310 aaPredicted RBP6.75□□□□□ -1.33
HPS4-206ENST00000439453 ZNF788Q6ZQV5 615 aa6.75□□□□□ -1.33
HPS4-206ENST00000439453 ZNF493Q6ZR52 646 aa6.75□□□□□ -1.33
HPS4-206ENST00000439453 IFI27L1Q96BM0 104 aa6.75□□□□□ -1.33
HPS4-206ENST00000439453 U3KQK5 164 aa6.75□□□□□ -1.33
HPS4-206ENST00000439453 ABCA4P78363 2273 aa6.75□□□□□ -1.33
HPS4-206ENST00000439453 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.75□□□□□ -1.33
HPS4-206ENST00000439453 PSG3Q16557 428 aa6.75□□□□□ -1.33
HPS4-206ENST00000439453 TPSG1Q9NRR2 321 aa6.75□□□□□ -1.33
HPS4-206ENST00000439453 MAP1AP78559 2803 aaPredicted RBP6.75□□□□□ -1.33
HPS4-206ENST00000439453 SLC25A17O43808 307 aa6.75□□□□□ -1.33
HPS4-206ENST00000439453 GATA4P43694 442 aa6.75□□□□□ -1.33
HPS4-206ENST00000439453 DIAPH2-AS1Q14236 149 aa6.75□□□□□ -1.33
HPS4-206ENST00000439453 Q6AWC8 147 aa6.75□□□□□ -1.33
HPS4-206ENST00000439453 BCL6BQ8N143 479 aaPredicted RBP6.75□□□□□ -1.33
HPS4-206ENST00000439453 TMEM14CQ9P0S9 112 aa6.75□□□□□ -1.33
HPS4-206ENST00000439453 LINC00312Q9Y6C7 94 aa6.75□□□□□ -1.33
HPS4-206ENST00000439453 MAST4O15021 2626 aa6.75□□□□□ -1.33
HPS4-206ENST00000439453 SVEP1Q4LDE5 3571 aa6.75□□□□□ -1.33
HPS4-206ENST00000439453 PRRC2AP48634 2157 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms