RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 M6PRP20645 277 aa9.16□□□□□ -0.94
GPC1-204ENST00000426280 MEOX2P50222 304 aa9.16□□□□□ -0.94
GPC1-204ENST00000426280 ZNF705AQ6ZN79 300 aaPredicted RBP9.16□□□□□ -0.94
GPC1-204ENST00000426280 OR10G4Q8NGN3 311 aa9.16□□□□□ -0.94
GPC1-204ENST00000426280 OR10G9Q8NGN4 311 aa9.16□□□□□ -0.94
GPC1-204ENST00000426280 OR10G7Q8NGN6 311 aa9.16□□□□□ -0.94
GPC1-204ENST00000426280 OR2G3Q8NGZ4 309 aa9.16□□□□□ -0.94
GPC1-204ENST00000426280 ZNF503Q96F45 646 aa9.16□□□□□ -0.94
GPC1-204ENST00000426280 MRPL32Q9BYC8 188 aaKnown RBP9.16□□□□□ -0.94
GPC1-204ENST00000426280 RNF24Q9Y225 148 aa9.16□□□□□ -0.94
GPC1-204ENST00000426280 KANTRA0A1W2PQU2 76 aa9.15□□□□□ -0.94
GPC1-204ENST00000426280 A8MTW9 85 aa9.15□□□□□ -0.94
GPC1-204ENST00000426280 ZNF705FA8MVS1 300 aaPredicted RBP9.15□□□□□ -0.94
GPC1-204ENST00000426280 LY6G6CO95867 125 aa9.15□□□□□ -0.94
GPC1-204ENST00000426280 OR10J4P0C629 311 aa9.15□□□□□ -0.94
GPC1-204ENST00000426280 MIFP14174 115 aa9.15□□□□□ -0.94
GPC1-204ENST00000426280 RHOBP62745 196 aa9.15□□□□□ -0.94
GPC1-204ENST00000426280 RPP25LQ8N5L8 163 aaKnown RBP9.15□□□□□ -0.94
GPC1-204ENST00000426280 LRRC20Q8TCA0 184 aa9.15□□□□□ -0.94
GPC1-204ENST00000426280 BLNKQ8WV28 456 aa9.15□□□□□ -0.94
GPC1-204ENST00000426280 GNPNAT1Q96EK6 184 aaPredicted RBP9.15□□□□□ -0.94
GPC1-204ENST00000426280 SAT2Q96F10 170 aaPredicted RBP9.15□□□□□ -0.94
GPC1-204ENST00000426280 ZNF471Q9BX82 626 aaPredicted RBP9.15□□□□□ -0.94
GPC1-204ENST00000426280 OR51M1Q9H341 326 aa9.15□□□□□ -0.94
GPC1-204ENST00000426280 RPRMQ9NS64 109 aa9.15□□□□□ -0.94
GPC1-204ENST00000426280 TMEM14CQ9P0S9 112 aa9.15□□□□□ -0.94
GPC1-204ENST00000426280 IGHV3OR16-12A0A075B7B8 117 aa9.14□□□□□ -0.95
GPC1-204ENST00000426280 CRXO43186 299 aaPredicted RBP9.14□□□□□ -0.95
GPC1-204ENST00000426280 OR7C2O60412 319 aa9.14□□□□□ -0.95
GPC1-204ENST00000426280 PFDN1O60925 122 aa9.14□□□□□ -0.95
GPC1-204ENST00000426280 HIST1H1EP10412 219 aaKnown RBP9.14□□□□□ -0.95
GPC1-204ENST00000426280 CNN1P51911 297 aaKnown RBP9.14□□□□□ -0.95
GPC1-204ENST00000426280 SERF2P84101 59 aa9.14□□□□□ -0.95
GPC1-204ENST00000426280 PSG9Q00887 426 aa9.14□□□□□ -0.95
GPC1-204ENST00000426280 C12orf74Q32Q52 190 aa9.14□□□□□ -0.95
GPC1-204ENST00000426280 TMEM41BQ5BJD5 291 aa9.14□□□□□ -0.95
GPC1-204ENST00000426280 LCN15Q6UWW0 184 aa9.14□□□□□ -0.95
GPC1-204ENST00000426280 Q6ZTC4 211 aa9.14□□□□□ -0.95
GPC1-204ENST00000426280 SSX7Q7RTT5 188 aa9.14□□□□□ -0.95
GPC1-204ENST00000426280 FXYD5Q96DB9 178 aa9.14□□□□□ -0.95
GPC1-204ENST00000426280 HYLS1Q96M11 299 aa9.14□□□□□ -0.95
GPC1-204ENST00000426280 CLUHP3Q96NS8 147 aa9.14□□□□□ -0.95
GPC1-204ENST00000426280 PAXXQ9BUH6 204 aa9.14□□□□□ -0.95
GPC1-204ENST00000426280 HRH4Q9H3N8 390 aa9.14□□□□□ -0.95
GPC1-204ENST00000426280 ZNF331Q9NQX6 463 aaPredicted RBP9.14□□□□□ -0.95
GPC1-204ENST00000426280 TRBV19A0A075B6N1 114 aa9.13□□□□□ -0.95
GPC1-204ENST00000426280 A0A1W2PPV4 95 aa9.13□□□□□ -0.95
GPC1-204ENST00000426280 NDUFB4O95168 129 aa9.13□□□□□ -0.95
GPC1-204ENST00000426280 CDC34P49427 236 aaPredicted RBP9.13□□□□□ -0.95
GPC1-204ENST00000426280 PSG3Q16557 428 aa9.13□□□□□ -0.95
GPC1-204ENST00000426280 ZFP69Q49AA0 526 aa9.13□□□□□ -0.95
GPC1-204ENST00000426280 EBLN2Q6P2I7 272 aa9.13□□□□□ -0.95
GPC1-204ENST00000426280 ZNF738Q8NE65 137 aa9.13□□□□□ -0.95
GPC1-204ENST00000426280 RNF141Q8WVD5 230 aa9.13□□□□□ -0.95
GPC1-204ENST00000426280 APLNQ9ULZ1 77 aa9.13□□□□□ -0.95
GPC1-204ENST00000426280 PRAC2D3DTV9 90 aa9.12□□□□□ -0.95
GPC1-204ENST00000426280 M0R2Z0 102 aa9.12□□□□□ -0.95
GPC1-204ENST00000426280 NBEAP1P0C6P0 100 aa9.12□□□□□ -0.95
GPC1-204ENST00000426280 NKX2-5P52952 324 aaPredicted RBP9.12□□□□□ -0.95
GPC1-204ENST00000426280 EMP1P54849 157 aa9.12□□□□□ -0.95
GPC1-204ENST00000426280 NUTF2P61970 127 aaKnown RBP9.12□□□□□ -0.95
GPC1-204ENST00000426280 ZNF726P1Q15940 193 aa9.12□□□□□ -0.95
GPC1-204ENST00000426280 SAMD13Q5VXD3 122 aa9.12□□□□□ -0.95
GPC1-204ENST00000426280 EXOC3-AS1Q8N2X6 119 aa9.12□□□□□ -0.95
GPC1-204ENST00000426280 C9orf62Q8N4C0 152 aa9.12□□□□□ -0.95
GPC1-204ENST00000426280 RAB24Q969Q5 203 aa9.12□□□□□ -0.95
GPC1-204ENST00000426280 PHYHIPLQ96FC7 376 aa9.12□□□□□ -0.95
GPC1-204ENST00000426280 SLC50A1Q9BRV3 221 aa9.12□□□□□ -0.95
GPC1-204ENST00000426280 C1QTNF4Q9BXJ3 329 aa9.12□□□□□ -0.95
GPC1-204ENST00000426280 KLK5Q9Y337 293 aaPredicted RBP9.12□□□□□ -0.95
GPC1-204ENST00000426280 M0R3E3 92 aa9.11□□□□□ -0.95
GPC1-204ENST00000426280 MBP02144 154 aa9.11□□□□□ -0.95
GPC1-204ENST00000426280 TAS2R45P59539 299 aa9.11□□□□□ -0.95
GPC1-204ENST00000426280 UBE2L3P68036 154 aaKnown RBP9.11□□□□□ -0.95
GPC1-204ENST00000426280 KIR3DS1Q14943 382 aa9.11□□□□□ -0.95
GPC1-204ENST00000426280 GUK1Q16774 197 aa9.11□□□□□ -0.95
GPC1-204ENST00000426280 SPINK13Q1W4C9 94 aa9.11□□□□□ -0.95
GPC1-204ENST00000426280 KHDC3LQ587J8 217 aa9.11□□□□□ -0.95
GPC1-204ENST00000426280 AKR1C8PQ5T2L2 129 aa9.11□□□□□ -0.95
GPC1-204ENST00000426280 NEU1Q99519 415 aa9.11□□□□□ -0.95
GPC1-204ENST00000426280 TRAV12-2A0A075B6T6 113 aa9.1□□□□□ -0.95
GPC1-204ENST00000426280 IGLL5B9A064 214 aa9.1□□□□□ -0.95
GPC1-204ENST00000426280 STAG3L2P0CL84 134 aa9.1□□□□□ -0.95
GPC1-204ENST00000426280 STAG3L3P0CL85 134 aa9.1□□□□□ -0.95
GPC1-204ENST00000426280 ARL14EPLP0DKL9 152 aa9.1□□□□□ -0.95
GPC1-204ENST00000426280 FHITP49789 147 aa9.1□□□□□ -0.95
GPC1-204ENST00000426280 ICAM4Q14773 271 aa9.1□□□□□ -0.95
GPC1-204ENST00000426280 BAP18Q8IXM2 172 aa9.1□□□□□ -0.95
GPC1-204ENST00000426280 OR8A1Q8NGG7 326 aa9.1□□□□□ -0.95
GPC1-204ENST00000426280 C2CD4CQ8TF44 421 aa9.1□□□□□ -0.95
GPC1-204ENST00000426280 RPUSD4Q96CM3 377 aaKnown RBP9.1□□□□□ -0.95
GPC1-204ENST00000426280 ACTR3CQ9C0K3 210 aaPredicted RBP9.1□□□□□ -0.95
GPC1-204ENST00000426280 ZNF705GA8MUZ8 300 aaPredicted RBP9.09□□□□□ -0.95
GPC1-204ENST00000426280 ZNF253O75346 499 aa9.09□□□□□ -0.95
GPC1-204ENST00000426280 SEC11BP0C7V7 166 aa9.09□□□□□ -0.95
GPC1-204ENST00000426280 TPT1P13693 172 aaKnown RBP9.09□□□□□ -0.95
GPC1-204ENST00000426280 AZU1P20160 251 aa9.09□□□□□ -0.95
GPC1-204ENST00000426280 RANP62826 216 aaKnown RBP9.09□□□□□ -0.95
GPC1-204ENST00000426280 HIST1H1AQ02539 215 aaPredicted RBP9.09□□□□□ -0.95
GPC1-204ENST00000426280 PQLC2Q6ZP29 291 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms