RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 BAGE2Q86Y30 109 aa16.04■□□□□ 0.16
GPC1-202ENST00000420138 TMEM190Q8WZ59 177 aa16.04■□□□□ 0.16
GPC1-202ENST00000420138 A0A087X0K7 114 aa16.03■□□□□ 0.16
GPC1-202ENST00000420138 IBA57Q5T440 356 aaKnown RBP16.03■□□□□ 0.16
GPC1-202ENST00000420138 SGK494Q96LW2 274 aa16.03■□□□□ 0.16
GPC1-202ENST00000420138 M0R3E3 92 aa16.03■□□□□ 0.16
GPC1-202ENST00000420138 ZNF253O75346 499 aa16.03■□□□□ 0.16
GPC1-202ENST00000420138 IGLV2-11P01706 119 aa16.03■□□□□ 0.16
GPC1-202ENST00000420138 GPR82Q96P67 336 aa16.03■□□□□ 0.16
GPC1-202ENST00000420138 GPR61Q9BZJ8 451 aa16.03■□□□□ 0.16
GPC1-202ENST00000420138 MTORP42345 2549 aa16.03■□□□□ 0.16
GPC1-202ENST00000420138 XKRY2A2RUG3 117 aa16.02■□□□□ 0.16
GPC1-202ENST00000420138 CYSRT1A8MQ03 144 aa16.02■□□□□ 0.16
GPC1-202ENST00000420138 UBE2G1P62253 170 aa16.02■□□□□ 0.16
GPC1-202ENST00000420138 COA6Q5JTJ3 125 aaKnown RBP16.02■□□□□ 0.16
GPC1-202ENST00000420138 C16orf54Q6UWD8 224 aa16.01■□□□□ 0.15
GPC1-202ENST00000420138 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.01■□□□□ 0.15
GPC1-202ENST00000420138 TMEM183AQ8IXX5 376 aa16.01■□□□□ 0.15
GPC1-202ENST00000420138 NHLRC2Q8NBF2 726 aa16.01■□□□□ 0.15
GPC1-202ENST00000420138 CMTM2Q8TAZ6 248 aa16.01■□□□□ 0.15
GPC1-202ENST00000420138 GLMPQ8WWB7 406 aa16.01■□□□□ 0.15
GPC1-202ENST00000420138 UBE2E2Q96LR5 201 aa16.01■□□□□ 0.15
GPC1-202ENST00000420138 PCP4L1A6NKN8 68 aa16.01■□□□□ 0.15
GPC1-202ENST00000420138 HILS1P60008 231 aa16.01■□□□□ 0.15
GPC1-202ENST00000420138 PSG9Q00887 426 aa16.01■□□□□ 0.15
GPC1-202ENST00000420138 PDZD11Q5EBL8 140 aa16.01■□□□□ 0.15
GPC1-202ENST00000420138 GOLT1AQ6ZVE7 132 aa16.01■□□□□ 0.15
GPC1-202ENST00000420138 FAM231DQ6ZW35 169 aa16.01■□□□□ 0.15
GPC1-202ENST00000420138 SMIM12Q96EX1 92 aa16.01■□□□□ 0.15
GPC1-202ENST00000420138 FMC1Q96HJ9 113 aa16.01■□□□□ 0.15
GPC1-202ENST00000420138 MLST8Q9BVC4 326 aa16.01■□□□□ 0.15
GPC1-202ENST00000420138 ZNF331Q9NQX6 463 aaPredicted RBP16.01■□□□□ 0.15
GPC1-202ENST00000420138 TRAV8-1A0A0A6YYK1 113 aa16■□□□□ 0.15
GPC1-202ENST00000420138 PRB4P10163 310 aaPredicted RBP16■□□□□ 0.15
GPC1-202ENST00000420138 RPL19P84098 196 aaKnown RBP16■□□□□ 0.15
GPC1-202ENST00000420138 GPHB5Q86YW7 130 aa16■□□□□ 0.15
GPC1-202ENST00000420138 KLHDC1Q8N7A1 406 aa16■□□□□ 0.15
GPC1-202ENST00000420138 DIRC3C9JPN6 131 aa15.99■□□□□ 0.15
GPC1-202ENST00000420138 LTAP01374 205 aa15.99■□□□□ 0.15
GPC1-202ENST00000420138 RNASE1P07998 156 aaKnown RBP15.99■□□□□ 0.15
GPC1-202ENST00000420138 LGALS1P09382 135 aaKnown RBP15.99■□□□□ 0.15
GPC1-202ENST00000420138 TCTEX1D4Q5JR98 221 aa15.99■□□□□ 0.15
GPC1-202ENST00000420138 AAMDCQ9H7C9 122 aa15.99■□□□□ 0.15
GPC1-202ENST00000420138 ZNF785A8K8V0 405 aa15.98■□□□□ 0.15
GPC1-202ENST00000420138 ZNF705GA8MUZ8 300 aaPredicted RBP15.98■□□□□ 0.15
GPC1-202ENST00000420138 IGFL4Q6B9Z1 124 aa15.98■□□□□ 0.15
GPC1-202ENST00000420138 SMIM27A0A1W2PRY6 76 aa15.98■□□□□ 0.15
GPC1-202ENST00000420138 HLA-DMBP28068 263 aa15.98■□□□□ 0.15
GPC1-202ENST00000420138 TM4SF20Q53R12 229 aa15.98■□□□□ 0.15
GPC1-202ENST00000420138 OR10D4PQ8NGN7 298 aa15.98■□□□□ 0.15
GPC1-202ENST00000420138 WIPF2Q8TF74 440 aaPredicted RBP15.98■□□□□ 0.15
GPC1-202ENST00000420138 JMJD8Q96S16 334 aa15.98■□□□□ 0.15
GPC1-202ENST00000420138 TRBV6-1A0A0K0K1D8 114 aa15.97■□□□□ 0.15
GPC1-202ENST00000420138 Q86TA4 180 aa15.97■□□□□ 0.15
GPC1-202ENST00000420138 GATCO43716 136 aaKnown RBP15.96■□□□□ 0.15
GPC1-202ENST00000420138 FABP4P15090 132 aa15.96■□□□□ 0.15
GPC1-202ENST00000420138 EDN2P20800 178 aa15.96■□□□□ 0.15
GPC1-202ENST00000420138 ARL6IP6Q8N6S5 226 aa15.96■□□□□ 0.15
GPC1-202ENST00000420138 TMEM75Q8N9X5 138 aa15.96■□□□□ 0.15
GPC1-202ENST00000420138 NIT2Q9NQR4 276 aa15.96■□□□□ 0.15
GPC1-202ENST00000420138 DAZ1Q9NQZ3 744 aaKnown RBP15.96■□□□□ 0.15
GPC1-202ENST00000420138 NSD1Q96L73 2696 aaPredicted RBP15.96■□□□□ 0.15
GPC1-202ENST00000420138 TRAV8-2A0A0B4J237 113 aa15.96■□□□□ 0.14
GPC1-202ENST00000420138 IGHV7-4-1A0A0J9YVY3 117 aa15.96■□□□□ 0.14
GPC1-202ENST00000420138 K7EMT4 169 aa15.96■□□□□ 0.14
GPC1-202ENST00000420138 CBLN1P23435 193 aa15.96■□□□□ 0.14
GPC1-202ENST00000420138 C18orf65Q6ZTR6 163 aa15.96■□□□□ 0.14
GPC1-202ENST00000420138 NUDT10Q8NFP7 164 aa15.96■□□□□ 0.14
GPC1-202ENST00000420138 NUDT11Q96G61 164 aa15.96■□□□□ 0.14
GPC1-202ENST00000420138 HIST1H2BLQ99880 126 aa15.96■□□□□ 0.14
GPC1-202ENST00000420138 IGHV4OR15-8A0A075B7B6 117 aa15.95■□□□□ 0.14
GPC1-202ENST00000420138 A0A087WW49 117 aa15.95■□□□□ 0.14
GPC1-202ENST00000420138 CRLF1O75462 422 aa15.95■□□□□ 0.14
GPC1-202ENST00000420138 PSG3Q16557 428 aa15.95■□□□□ 0.14
GPC1-202ENST00000420138 COX19Q49B96 90 aa15.95■□□□□ 0.14
GPC1-202ENST00000420138 FAM106AQ4KMX7 169 aa15.95■□□□□ 0.14
GPC1-202ENST00000420138 GRAMD2BQ96HH9 432 aa15.95■□□□□ 0.14
GPC1-202ENST00000420138 C8orf86Q6ZUL3 223 aa15.94■□□□□ 0.14
GPC1-202ENST00000420138 GNB1LQ9BYB4 327 aa15.94■□□□□ 0.14
GPC1-202ENST00000420138 MRPL18Q9H0U6 180 aaKnown RBP15.94■□□□□ 0.14
GPC1-202ENST00000420138 CHEK1O14757 476 aa15.94■□□□□ 0.14
GPC1-202ENST00000420138 S100A12P80511 92 aa15.94■□□□□ 0.14
GPC1-202ENST00000420138 WDR73Q6P4I2 378 aa15.94■□□□□ 0.14
GPC1-202ENST00000420138 LINC00322Q6ZN03 302 aaPredicted RBP15.94■□□□□ 0.14
GPC1-202ENST00000420138 SLC50A1Q9BRV3 221 aa15.94■□□□□ 0.14
GPC1-202ENST00000420138 RHPN1-AS1Q9BWJ2 59 aa15.94■□□□□ 0.14
GPC1-202ENST00000420138 SMPXQ9UHP9 88 aa15.94■□□□□ 0.14
GPC1-202ENST00000420138 F8P00451 2351 aa15.93■□□□□ 0.14
GPC1-202ENST00000420138 IZUMO1RA6ND01 250 aa15.93■□□□□ 0.14
GPC1-202ENST00000420138 ZNF705FA8MVS1 300 aaPredicted RBP15.93■□□□□ 0.14
GPC1-202ENST00000420138 TCL1AP56279 114 aa15.93■□□□□ 0.14
GPC1-202ENST00000420138 PYY3Q5JQD4 70 aa15.93■□□□□ 0.14
GPC1-202ENST00000420138 PRR27Q6MZM9 219 aa15.93■□□□□ 0.14
GPC1-202ENST00000420138 PRNTQ86SH4 94 aa15.93■□□□□ 0.14
GPC1-202ENST00000420138 RNF182Q8N6D2 247 aa15.93■□□□□ 0.14
GPC1-202ENST00000420138 PACRGQ96M98 296 aaPredicted RBP15.93■□□□□ 0.14
GPC1-202ENST00000420138 PSG8Q9UQ74 426 aa15.93■□□□□ 0.14
GPC1-202ENST00000420138 IGKV2-40A0A087WW87 121 aaPredicted RBP15.92■□□□□ 0.14
GPC1-202ENST00000420138 A0A1W2PS18 150 aa15.92■□□□□ 0.14
GPC1-202ENST00000420138 SNURFLB1AK76 121 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms