RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.94□□□□□ -2.1
VPS41-206ENST00000418457 TRBV7-9A0A0J9YWB2 115 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 TRBV6-1A0A0K0K1D8 114 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 TEX50A0A1B0GTY4 177 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 C7orf71A4D174 169 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 KLLNB2CW77 178 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 GGTLC3B5MD39 225 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 TMEM238C9JI98 176 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 H3BRM9 83 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 J3QR89 54 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 K7EP34 96 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 CORTO00230 105 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 ZNF207O43670 478 aaKnown RBP1.94□□□□□ -2.1
VPS41-206ENST00000418457 COX7A2P2O60397 106 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 GIG44P09565 113 aaPredicted RBP1.94□□□□□ -2.1
VPS41-206ENST00000418457 NBEAP1P0C6P0 100 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 IGLC1P0CG04 106 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 CT45A6P0DMU7 189 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 CT45A5P0DMU8 189 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 CT45A10P0DMU9 189 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 CT45A7P0DMV0 189 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 COX8AP10176 69 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 DEFA4P12838 97 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 CCL2P13500 99 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 HTR1DP28221 377 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 OTX2P32243 289 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 SSTR5P35346 364 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 CFHR2P36980 270 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 TCL1AP56279 114 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 UBE2L3P68036 154 aaKnown RBP1.94□□□□□ -2.1
VPS41-206ENST00000418457 CXCL6P80162 114 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 ERHP84090 104 aaKnown RBP1.94□□□□□ -2.1
VPS41-206ENST00000418457 PSG9Q00887 426 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 SRYQ05066 204 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 HSD52Q0P140 79 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 SLAQ13239 276 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 SCGB2A2Q13296 93 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 FXYD3Q14802 87 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 PSG3Q16557 428 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 MPV17L2Q567V2 206 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 TMEM97Q5BJF2 176 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 CT45A1Q5HYN5 189 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 LINC01545Q5VT33 79 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 C9orf135Q5VTT2 229 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 C10orf113Q5VZT2 155 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 SPATA31B1PQ5VZV4 182 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 AMMECR1LQ6DCA0 310 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 WDR82Q6UXN9 313 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 MIR17HGQ75NE6 70 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 BHLHA15Q7RTS1 189 aaPredicted RBP1.94□□□□□ -2.1
VPS41-206ENST00000418457 S100A7AQ86SG5 101 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 WDR86Q86TI4 376 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 MDP1Q86V88 176 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 PDPNQ86YL7 162 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 C11orf53Q8IXP5 236 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 MTURNQ8N3F0 131 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 FAM19A2Q8N3H0 131 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 DEFB119Q8N690 84 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 C5orf17Q8NAS9 161 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 GATD1Q8NB37 220 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 NUP35Q8NFH5 326 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 OR2Z1Q8NG97 314 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 OR4X2Q8NGF9 303 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 OR10AG1Q8NH19 301 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 CT45A3Q8NHU0 189 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 VSTM2AQ8TAG5 236 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 H1FXQ92522 213 aaKnown RBP1.94□□□□□ -2.1
VPS41-206ENST00000418457 TNFRSF14Q92956 283 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 COQ2Q96H96 371 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 GPR82Q96P67 336 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 PAXXQ9BUH6 204 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 IFI27L2Q9H2X8 130 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 RPP21Q9H633 154 aaKnown RBP1.94□□□□□ -2.1
VPS41-206ENST00000418457 ZNF430Q9H8G1 570 aaPredicted RBP1.94□□□□□ -2.1
VPS41-206ENST00000418457 IDI2-AS1Q9NZ38 188 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 DPM3Q9P2X0 92 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 CLCF1Q9UBD9 225 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 Q9UF83 564 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 EPDR1Q9UM22 224 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 KLF13Q9Y2Y9 288 aaPredicted RBP1.94□□□□□ -2.1
VPS41-206ENST00000418457 KLF12Q9Y4X4 402 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 OR51B2Q9Y5P1 312 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 U3KQA8 63 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 ASPMQ8IZT6 3477 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 TTC28Q96AY4 2481 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 USF3Q68DE3 2245 aa1.94□□□□□ -2.1
VPS41-206ENST00000418457 ASCC3Q8N3C0 2202 aaKnown RBP1.94□□□□□ -2.1
VPS41-206ENST00000418457 TET2Q6N021 2002 aaPredicted RBP1.93□□□□□ -2.1
VPS41-206ENST00000418457 MED12LQ86YW9 2145 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 RTTNQ86VV8 2226 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 ASXL3Q9C0F0 2248 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 TANC2Q9HCD6 1990 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 LOC102724200A0A096LPH7 203 aaPredicted RBP1.93□□□□□ -2.1
VPS41-206ENST00000418457 IGHV3-43A0A0B4J1X8 118 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 IGHV1-24A0A0C4DH33 117 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 IGHV3-35A0A0C4DH35 117 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 MUC21A0A0G2JKD1 596 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 A0A0G2JMM0 328 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 MUC21A0A140T8X8 626 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 A0A1B0GV72 72 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms