RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 CD28P10747 220 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 G6PCP35575 357 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 KIR2DS2P43631 304 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 IER3P46695 156 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 ZNF121P58317 390 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 CCL20P78556 96 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 PAX8Q06710 450 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 CLEC12AQ5QGZ9 265 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 TEX36Q5VZQ5 186 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 BPIFA4PQ86YQ2 179 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 CLECL1Q8IZS7 167 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 MAPKAPK5-AS1Q8N8E1 139 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 OR13A1Q8NGR1 328 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 OR10J6PQ8NGY7 276 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 MPLKIPQ8TAP9 179 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 NTN5Q8WTR8 489 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 RNF138Q8WVD3 245 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 OR5P2Q8WZ92 322 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 ST8SIA1Q92185 356 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 FAM3DQ96BQ1 224 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 URB1-AS1Q96HZ7 61 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 SRXN1Q9BYN0 137 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 PARP12Q9H0J9 701 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 ENY2Q9NPA8 101 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 YTHDF2Q9Y5A9 579 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 TIMM9Q9Y5J7 89 aa4.29□□□□□ -1.72
ECHDC1-206ENST00000417628 A0A1W2PS18 150 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 C5orf49A4QMS7 147 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 RIIAD1A6NNX1 92 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 H3BUT2 72 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 SH2D1BO14796 132 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 ST8SIA3O43173 380 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 IGHG1P01857 330 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 CSN3P07498 182 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 DAP3P51398 398 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 XGP55808 180 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 MEF2CQ06413 473 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 KLF5Q13887 457 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 HES1Q14469 280 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 ZNF74Q16587 644 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 TIGITQ495A1 244 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 C1orf100Q5SVJ3 147 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 ZNF684Q5T5D7 378 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 OTPQ5XKR4 325 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 SLC35E4Q6ICL7 350 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 AMTNQ6UX39 209 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 C2orf91Q6ZV80 131 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 ZNF645Q8N7E2 425 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 OR6K6Q8NGW6 343 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 OR51H1Q8NH63 302 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 PIFOQ8TCI5 191 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 GTSF1Q8WW33 167 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 FLYWCH2Q96CP2 140 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 SGK494Q96LW2 274 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 TMEM70Q9BUB7 260 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 CLEC7AQ9BXN2 247 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 SH3BGRL3Q9H299 93 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 C5orf66Q9H5L9 145 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 PELI2Q9HAT8 420 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 HIGD1BQ9P298 99 aa4.28□□□□□ -1.72
ECHDC1-206ENST00000417628 DMBT1Q9UGM3 2413 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 OR4C46A6NHA9 309 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 C2orf70A6NJV1 201 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 GGTLC3B5MD39 225 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 MS4A18H0YCH9 400 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 NCR2O95944 276 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 IGHV3-7P01780 117 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 TTRP02766 147 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 CECR9P0C854 216 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 RBMY1CP0DJD4 496 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 IFITM1P13164 125 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 HLA-DRB4P13762 266 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 VDAC2P45880 294 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 FUT6P51993 359 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 HSPE1P61604 102 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 RPL31P62899 125 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 PSG4Q00888 419 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 TGFBR3Q03167 851 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 CATR1Q13166 79 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 SPRNQ5BIV9 151 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 MORN5Q5VZ52 161 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 FAM219BQ5XKK7 198 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 Q6P435 159 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 FAM19A5Q7Z5A7 132 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 SPATA12Q7Z6I5 190 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 TPRX1Q8N7U7 411 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 NEXN-AS1Q8NBZ9 246 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 OR11H6Q8NGC7 330 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 OR4C13Q8NGP0 309 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 OR2T6Q8NHC8 308 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 OCC1Q8TAD7 63 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 SCGB1C1Q8TD33 95 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 MYOZ3Q8TDC0 251 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 PPDPFLQ8WWR9 84 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 RTN4IP1Q8WWV3 396 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 LHX4Q969G2 390 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 PRADC1Q9BSG0 188 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 GNB4Q9HAV0 340 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 IL36BQ9NZH7 164 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 GNG13Q9P2W3 67 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms