RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 TREM1Q9NP99 234 aa17.69■□□□□ 0.42
TSPAN4-202ENST00000397396 EPDR1Q9UM22 224 aa17.69■□□□□ 0.42
TSPAN4-202ENST00000397396 K7EQM0 130 aa17.68■□□□□ 0.42
TSPAN4-202ENST00000397396 CD81P60033 236 aa17.68■□□□□ 0.42
TSPAN4-202ENST00000397396 SPATA3Q8NHX4 192 aa17.68■□□□□ 0.42
TSPAN4-202ENST00000397396 ATG101Q9BSB4 218 aa17.68■□□□□ 0.42
TSPAN4-202ENST00000397396 C11orf52Q96A22 123 aa17.67■□□□□ 0.42
TSPAN4-202ENST00000397396 ZMAT5Q9UDW3 170 aaKnown RBP17.67■□□□□ 0.42
TSPAN4-202ENST00000397396 STAB1Q9NY15 2570 aa17.66■□□□□ 0.42
TSPAN4-202ENST00000397396 ZNF738Q8NE65 137 aa17.66■□□□□ 0.42
TSPAN4-202ENST00000397396 SLC35B3Q9H1N7 401 aa17.66■□□□□ 0.42
TSPAN4-202ENST00000397396 FBLL1A6NHQ2 334 aaKnown RBP17.65■□□□□ 0.42
TSPAN4-202ENST00000397396 PEX7O00628 323 aa17.65■□□□□ 0.42
TSPAN4-202ENST00000397396 TCRAP04437 139 aa17.65■□□□□ 0.42
TSPAN4-202ENST00000397396 IGLL1P15814 213 aa17.65■□□□□ 0.42
TSPAN4-202ENST00000397396 RNF182Q8N6D2 247 aa17.65■□□□□ 0.42
TSPAN4-202ENST00000397396 CYB561D1Q8N8Q1 229 aa17.65■□□□□ 0.42
TSPAN4-202ENST00000397396 LINC00052Q96N35 136 aa17.65■□□□□ 0.42
TSPAN4-202ENST00000397396 IZUMO1RA6ND01 250 aa17.64■□□□□ 0.41
TSPAN4-202ENST00000397396 M0R3E3 92 aa17.64■□□□□ 0.41
TSPAN4-202ENST00000397396 ZNF688P0C7X2 276 aa17.64■□□□□ 0.41
TSPAN4-202ENST00000397396 FAM110AQ9BQ89 295 aa17.64■□□□□ 0.41
TSPAN4-202ENST00000397396 ZNF256Q9Y2P7 627 aaPredicted RBP17.64■□□□□ 0.41
TSPAN4-202ENST00000397396 SCO2A0A1W2PP80 73 aa17.63■□□□□ 0.41
TSPAN4-202ENST00000397396 RBAKDNA6NC62 111 aa17.63■□□□□ 0.41
TSPAN4-202ENST00000397396 DIRC3C9JPN6 131 aa17.63■□□□□ 0.41
TSPAN4-202ENST00000397396 S100A9P06702 114 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-202ENST00000397396 SRP19P09132 144 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-202ENST00000397396 AKR1C3P42330 323 aa17.63■□□□□ 0.41
TSPAN4-202ENST00000397396 CNN1P51911 297 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-202ENST00000397396 PSMG4Q5JS54 123 aa17.63■□□□□ 0.41
TSPAN4-202ENST00000397396 IGFL4Q6B9Z1 124 aa17.63■□□□□ 0.41
TSPAN4-202ENST00000397396 RPH3ALQ9UNE2 315 aa17.63■□□□□ 0.41
TSPAN4-202ENST00000397396 HLA-DMBP28068 263 aa17.62■□□□□ 0.41
TSPAN4-202ENST00000397396 SRSF3P84103 164 aaKnown RBP17.62■□□□□ 0.41
TSPAN4-202ENST00000397396 BEAN1Q3B7T3 259 aa17.62■□□□□ 0.41
TSPAN4-202ENST00000397396 GNG5P63218 68 aa17.61■□□□□ 0.41
TSPAN4-202ENST00000397396 OR10J6PQ8NGY7 276 aa17.61■□□□□ 0.41
TSPAN4-202ENST00000397396 C20orf173Q96LM9 149 aa17.61■□□□□ 0.41
TSPAN4-202ENST00000397396 UBE2G1P62253 170 aa17.6■□□□□ 0.41
TSPAN4-202ENST00000397396 GOLT1AQ6ZVE7 132 aa17.6■□□□□ 0.41
TSPAN4-202ENST00000397396 GTSCR1Q86UQ5 136 aa17.6■□□□□ 0.41
TSPAN4-202ENST00000397396 FAM24BQ8N5W8 94 aa17.6■□□□□ 0.41
TSPAN4-202ENST00000397396 TMEM75Q8N9X5 138 aa17.6■□□□□ 0.41
TSPAN4-202ENST00000397396 C2CD4CQ8TF44 421 aa17.6■□□□□ 0.41
TSPAN4-202ENST00000397396 FMC1Q96HJ9 113 aa17.6■□□□□ 0.41
TSPAN4-202ENST00000397396 MAP6D1Q9H9H5 199 aa17.6■□□□□ 0.41
TSPAN4-202ENST00000397396 OR11H12B2RN74 326 aa17.59■□□□□ 0.41
TSPAN4-202ENST00000397396 FAM74A3Q4VXF1 159 aa17.59■□□□□ 0.41
TSPAN4-202ENST00000397396 EBLN2Q6P2I7 272 aa17.59■□□□□ 0.41
TSPAN4-202ENST00000397396 FOXI2Q6ZQN5 318 aa17.59■□□□□ 0.41
TSPAN4-202ENST00000397396 ZNF705FA8MVS1 300 aaPredicted RBP17.58■□□□□ 0.4
TSPAN4-202ENST00000397396 SFTA3P0C7M3 94 aa17.58■□□□□ 0.4
TSPAN4-202ENST00000397396 CEBPGP53567 150 aa17.58■□□□□ 0.4
TSPAN4-202ENST00000397396 TAS2R60P59551 318 aa17.58■□□□□ 0.4
TSPAN4-202ENST00000397396 DEFB131AP59861 70 aa17.58■□□□□ 0.4
TSPAN4-202ENST00000397396 SOHLH1Q5JUK2 328 aa17.58■□□□□ 0.4
TSPAN4-202ENST00000397396 CITED4Q96RK1 184 aa17.58■□□□□ 0.4
TSPAN4-202ENST00000397396 C9JQL5 133 aa17.57■□□□□ 0.4
TSPAN4-202ENST00000397396 TMEM183BQ1AE95 376 aa17.57■□□□□ 0.4
TSPAN4-202ENST00000397396 OR8A1Q8NGG7 326 aa17.57■□□□□ 0.4
TSPAN4-202ENST00000397396 PARLQ9H300 379 aa17.57■□□□□ 0.4
TSPAN4-202ENST00000397396 KLF12Q9Y4X4 402 aa17.57■□□□□ 0.4
TSPAN4-202ENST00000397396 TRBV6-1A0A0K0K1D8 114 aa17.56■□□□□ 0.4
TSPAN4-202ENST00000397396 TMEM218A2RU14 115 aa17.56■□□□□ 0.4
TSPAN4-202ENST00000397396 DUSP14O95147 198 aaKnown RBP17.56■□□□□ 0.4
TSPAN4-202ENST00000397396 TMEM78Q5T7P6 136 aa17.56■□□□□ 0.4
TSPAN4-202ENST00000397396 SLC7A5P1Q8MH63 180 aa17.56■□□□□ 0.4
TSPAN4-202ENST00000397396 DNHD1Q96M86 4753 aa17.55■□□□□ 0.4
TSPAN4-202ENST00000397396 IGKV2-40A0A087WW87 121 aaPredicted RBP17.55■□□□□ 0.4
TSPAN4-202ENST00000397396 IGKV2D-40P01614 121 aaPredicted RBP17.55■□□□□ 0.4
TSPAN4-202ENST00000397396 RPL35P42766 123 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-202ENST00000397396 ODF3L2Q3SX64 289 aa17.55■□□□□ 0.4
TSPAN4-202ENST00000397396 C9orf47Q6ZRZ4 202 aa17.55■□□□□ 0.4
TSPAN4-202ENST00000397396 SMIM7Q9BQ49 75 aa17.55■□□□□ 0.4
TSPAN4-202ENST00000397396 SAV1Q9H4B6 383 aaPredicted RBP17.55■□□□□ 0.4
TSPAN4-202ENST00000397396 PRAC2D3DTV9 90 aa17.54■□□□□ 0.4
TSPAN4-202ENST00000397396 NPIPB6E9PJ23 425 aa17.54■□□□□ 0.4
TSPAN4-202ENST00000397396 FLI1Q01543 452 aaPredicted RBP17.54■□□□□ 0.4
TSPAN4-202ENST00000397396 LINC00477Q96M19 166 aa17.54■□□□□ 0.4
TSPAN4-202ENST00000397396 NDFIP1Q9BT67 221 aa17.54■□□□□ 0.4
TSPAN4-202ENST00000397396 A0A0J9YX75 114 aa17.53■□□□□ 0.4
TSPAN4-202ENST00000397396 ZNF727A8MUV8 499 aa17.53■□□□□ 0.4
TSPAN4-202ENST00000397396 KRBOX1C9JBD0 128 aa17.53■□□□□ 0.4
TSPAN4-202ENST00000397396 C9JCJ5 164 aa17.53■□□□□ 0.4
TSPAN4-202ENST00000397396 HIST1H1AQ02539 215 aaPredicted RBP17.53■□□□□ 0.4
TSPAN4-202ENST00000397396 ZNF674Q2M3X9 581 aa17.53■□□□□ 0.4
TSPAN4-202ENST00000397396 SMIM12Q96EX1 92 aa17.53■□□□□ 0.4
TSPAN4-202ENST00000397396 PPP1R14DQ9NXH3 145 aa17.53■□□□□ 0.4
TSPAN4-202ENST00000397396 ANK2Q01484 3957 aa17.53■□□□□ 0.4
TSPAN4-202ENST00000397396 HLA-DRB4P13762 266 aa17.52■□□□□ 0.4
TSPAN4-202ENST00000397396 GNG4P50150 75 aa17.52■□□□□ 0.4
TSPAN4-202ENST00000397396 EGFEM1PQ0D2K5 195 aa17.52■□□□□ 0.4
TSPAN4-202ENST00000397396 OXLD1Q5BKU9 147 aa17.52■□□□□ 0.4
TSPAN4-202ENST00000397396 DERL1Q9BUN8 251 aa17.52■□□□□ 0.4
TSPAN4-202ENST00000397396 SEC11CQ9BY50 192 aa17.52■□□□□ 0.4
TSPAN4-202ENST00000397396 PSG8Q9UQ74 426 aa17.52■□□□□ 0.4
TSPAN4-202ENST00000397396 ZFP30Q9Y2G7 519 aa17.52■□□□□ 0.4
TSPAN4-202ENST00000397396 LENEPQ9Y5L5 61 aa17.52■□□□□ 0.4
TSPAN4-202ENST00000397396 HLA-DRB4X5D2U9 266 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms