RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 B4DSR2 109 aa9.9□□□□□ -0.82
SIN3A-202ENST00000394947 PRR30Q53SZ7 412 aaPredicted RBP9.9□□□□□ -0.82
SIN3A-202ENST00000394947 PSME4Q14997 1843 aa9.9□□□□□ -0.82
SIN3A-202ENST00000394947 KIF26BQ2KJY2 2108 aa9.9□□□□□ -0.82
SIN3A-202ENST00000394947 IGLV10-54A0A075B6I4 117 aa9.9□□□□□ -0.82
SIN3A-202ENST00000394947 RNF183Q96D59 192 aa9.9□□□□□ -0.82
SIN3A-202ENST00000394947 THADAQ6YHU6 1953 aa9.9□□□□□ -0.83
SIN3A-202ENST00000394947 TRGV9Q99603 122 aa9.9□□□□□ -0.83
SIN3A-202ENST00000394947 I3L3M4 83 aa9.89□□□□□ -0.83
SIN3A-202ENST00000394947 C9orf139Q6ZV77 190 aa9.89□□□□□ -0.83
SIN3A-202ENST00000394947 C1QTNF4Q9BXJ3 329 aa9.89□□□□□ -0.83
SIN3A-202ENST00000394947 LINC01356Q8N9X3 169 aa9.89□□□□□ -0.83
SIN3A-202ENST00000394947 LINC01619G3V211 115 aa9.89□□□□□ -0.83
SIN3A-202ENST00000394947 CYYR1Q96J86 154 aa9.89□□□□□ -0.83
SIN3A-202ENST00000394947 DOCK4Q8N1I0 1966 aa9.89□□□□□ -0.83
SIN3A-202ENST00000394947 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.89□□□□□ -0.83
SIN3A-202ENST00000394947 IGKV2-29A2NJV5 120 aaPredicted RBP9.89□□□□□ -0.83
SIN3A-202ENST00000394947 INAFM2P0DMQ5 153 aa9.89□□□□□ -0.83
SIN3A-202ENST00000394947 H3BMG7 143 aa9.89□□□□□ -0.83
SIN3A-202ENST00000394947 ID3Q02535 119 aa9.89□□□□□ -0.83
SIN3A-202ENST00000394947 Q86TA4 180 aa9.89□□□□□ -0.83
SIN3A-202ENST00000394947 TMEM243Q9BU79 118 aa9.89□□□□□ -0.83
SIN3A-202ENST00000394947 PYY3Q5JQD4 70 aa9.88□□□□□ -0.83
SIN3A-202ENST00000394947 POLR3KQ9Y2Y1 108 aaPredicted RBP9.88□□□□□ -0.83
SIN3A-202ENST00000394947 CMC4P56277 68 aaPredicted RBP9.88□□□□□ -0.83
SIN3A-202ENST00000394947 AMTNQ6UX39 209 aa9.88□□□□□ -0.83
SIN3A-202ENST00000394947 C8orf31Q8N9H6 132 aa9.88□□□□□ -0.83
SIN3A-202ENST00000394947 AKAP6Q13023 2319 aa9.88□□□□□ -0.83
SIN3A-202ENST00000394947 E9PLN8 166 aa9.88□□□□□ -0.83
SIN3A-202ENST00000394947 DAZ1Q9NQZ3 744 aaKnown RBP9.88□□□□□ -0.83
SIN3A-202ENST00000394947 RNF114Q9Y508 228 aa9.88□□□□□ -0.83
SIN3A-202ENST00000394947 A0A0G2JRQ6 117 aa9.88□□□□□ -0.83
SIN3A-202ENST00000394947 HS3ST6Q96QI5 342 aa9.88□□□□□ -0.83
SIN3A-202ENST00000394947 EIF4EBP2Q13542 120 aaPredicted RBP9.87□□□□□ -0.83
SIN3A-202ENST00000394947 SP5Q6BEB4 398 aaPredicted RBP9.87□□□□□ -0.83
SIN3A-202ENST00000394947 NOP10Q9NPE3 64 aaKnown RBP9.87□□□□□ -0.83
SIN3A-202ENST00000394947 FAM223BA6NKX1 122 aa9.87□□□□□ -0.83
SIN3A-202ENST00000394947 FAM223AQ8IWN6 122 aa9.87□□□□□ -0.83
SIN3A-202ENST00000394947 ETDBQ3ZM63 59 aa9.87□□□□□ -0.83
SIN3A-202ENST00000394947 C2orf66Q6UXQ4 117 aa9.87□□□□□ -0.83
SIN3A-202ENST00000394947 WDR86Q86TI4 376 aa9.87□□□□□ -0.83
SIN3A-202ENST00000394947 DLEC1Q9Y238 1755 aa9.87□□□□□ -0.83
SIN3A-202ENST00000394947 MPZP25189 248 aa9.87□□□□□ -0.83
SIN3A-202ENST00000394947 C20orf204Q6ZNR8 217 aa9.87□□□□□ -0.83
SIN3A-202ENST00000394947 IGHV3-30P01768 117 aa9.87□□□□□ -0.83
SIN3A-202ENST00000394947 IGHV3-33P01772 117 aa9.87□□□□□ -0.83
SIN3A-202ENST00000394947 IGHV3-30-3P0DP02 117 aa9.87□□□□□ -0.83
SIN3A-202ENST00000394947 IGHV3-30-5P0DP03 117 aa9.87□□□□□ -0.83
SIN3A-202ENST00000394947 KLHDC3Q9BQ90 382 aa9.87□□□□□ -0.83
SIN3A-202ENST00000394947 CYTL1Q9NRR1 136 aa9.87□□□□□ -0.83
SIN3A-202ENST00000394947 SEC16AO15027 2179 aa9.86□□□□□ -0.83
SIN3A-202ENST00000394947 NPSP0C0P6 89 aa9.86□□□□□ -0.83
SIN3A-202ENST00000394947 IGKV3D-7A0A0C4DH55 119 aa9.86□□□□□ -0.83
SIN3A-202ENST00000394947 WFDC11Q8NEX6 87 aa9.86□□□□□ -0.83
SIN3A-202ENST00000394947 GBF1Q92538 1859 aa9.86□□□□□ -0.83
SIN3A-202ENST00000394947 IGHG2P01859 326 aa9.86□□□□□ -0.83
SIN3A-202ENST00000394947 DUX4L9Q6RFH8 374 aaPredicted RBP9.86□□□□□ -0.83
SIN3A-202ENST00000394947 FREM3P0C091 2139 aa9.86□□□□□ -0.83
SIN3A-202ENST00000394947 NDUFA12Q9UI09 145 aa9.85□□□□□ -0.83
SIN3A-202ENST00000394947 MARF1Q9Y4F3 1742 aaKnown RBP9.85□□□□□ -0.83
SIN3A-202ENST00000394947 IGHV4OR15-8A0A075B7B6 117 aa9.85□□□□□ -0.83
SIN3A-202ENST00000394947 A0A087WW49 117 aa9.85□□□□□ -0.83
SIN3A-202ENST00000394947 GAGE12HA6NDE8 117 aa9.85□□□□□ -0.83
SIN3A-202ENST00000394947 NCR3O14931 201 aa9.85□□□□□ -0.83
SIN3A-202ENST00000394947 MRPL51Q4U2R6 128 aaKnown RBP9.85□□□□□ -0.83
SIN3A-202ENST00000394947 MRPL14Q6P1L8 145 aaKnown RBP9.85□□□□□ -0.83
SIN3A-202ENST00000394947 LINC00114Q6XXX2 140 aa9.85□□□□□ -0.83
SIN3A-202ENST00000394947 CFHR4Q92496 578 aa9.85□□□□□ -0.83
SIN3A-202ENST00000394947 FAM120AOSQ5T036 256 aa9.85□□□□□ -0.83
SIN3A-202ENST00000394947 PHF3Q92576 2039 aaKnown RBP9.85□□□□□ -0.83
SIN3A-202ENST00000394947 NDUFB8O95169 186 aa9.85□□□□□ -0.83
SIN3A-202ENST00000394947 STRCP1A6NGW2 1772 aa9.85□□□□□ -0.83
SIN3A-202ENST00000394947 IGKV1D-17A0A075B6S4 117 aa9.85□□□□□ -0.83
SIN3A-202ENST00000394947 M0R1W7 72 aa9.85□□□□□ -0.83
SIN3A-202ENST00000394947 DEFB136Q30KP8 78 aa9.85□□□□□ -0.83
SIN3A-202ENST00000394947 GGNQ86UU5 652 aa9.85□□□□□ -0.83
SIN3A-202ENST00000394947 Q6ZVH6 145 aa9.85□□□□□ -0.83
SIN3A-202ENST00000394947 ANKRD29Q8N6D5 301 aa9.85□□□□□ -0.83
SIN3A-202ENST00000394947 GLI3P10071 1580 aa9.84□□□□□ -0.83
SIN3A-202ENST00000394947 DSCR9P59020 149 aa9.84□□□□□ -0.83
SIN3A-202ENST00000394947 USMG5Q96IX5 58 aa9.84□□□□□ -0.83
SIN3A-202ENST00000394947 C15orf62A8K5M9 175 aa9.84□□□□□ -0.83
SIN3A-202ENST00000394947 BUB3O43684 328 aa9.84□□□□□ -0.83
SIN3A-202ENST00000394947 CEND1Q8N111 149 aa9.84□□□□□ -0.83
SIN3A-202ENST00000394947 SDHAF1A6NFY7 115 aa9.84□□□□□ -0.83
SIN3A-202ENST00000394947 BOD1L2Q8IYS8 172 aa9.84□□□□□ -0.83
SIN3A-202ENST00000394947 LOC285556D6RIA3 1793 aa9.84□□□□□ -0.83
SIN3A-202ENST00000394947 NYNRINQ9P2P1 1898 aaKnown RBP9.84□□□□□ -0.83
SIN3A-202ENST00000394947 IGHV1-24A0A0C4DH33 117 aa9.83□□□□□ -0.84
SIN3A-202ENST00000394947 F6UB75 175 aa9.83□□□□□ -0.84
SIN3A-202ENST00000394947 FGF16O43320 207 aa9.83□□□□□ -0.84
SIN3A-202ENST00000394947 MST1LQ2TV78 715 aa9.83□□□□□ -0.84
SIN3A-202ENST00000394947 C5orf38Q86SI9 138 aa9.83□□□□□ -0.84
SIN3A-202ENST00000394947 DOCK7Q96N67 2140 aa9.83□□□□□ -0.84
SIN3A-202ENST00000394947 GREB1Q4ZG55 1949 aa9.83□□□□□ -0.84
SIN3A-202ENST00000394947 IL18BPO95998 194 aa9.83□□□□□ -0.84
SIN3A-202ENST00000394947 ZMAT4Q9H898 229 aa9.83□□□□□ -0.84
SIN3A-202ENST00000394947 FAM104BQ5XKR9 115 aa9.83□□□□□ -0.84
SIN3A-202ENST00000394947 INTS1Q8N201 2190 aaKnown RBP9.83□□□□□ -0.84
SIN3A-202ENST00000394947 HLA-DMBP28068 263 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms