RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 ATRXP46100 2492 aa9.41□□□□□ -0.9
SPTBN1-202ENST00000356805 C1QTNF4Q9BXJ3 329 aa9.41□□□□□ -0.9
SPTBN1-202ENST00000356805 PLCE1Q9P212 2302 aa9.41□□□□□ -0.9
SPTBN1-202ENST00000356805 PRB1P04280 392 aa9.4□□□□□ -0.9
SPTBN1-202ENST00000356805 FAM231DQ6ZW35 169 aa9.4□□□□□ -0.9
SPTBN1-202ENST00000356805 IGHV3-16A0A0C4DH30 117 aa9.4□□□□□ -0.9
SPTBN1-202ENST00000356805 TRACP01848 142 aa9.4□□□□□ -0.9
SPTBN1-202ENST00000356805 GATA4P43694 442 aa9.4□□□□□ -0.9
SPTBN1-202ENST00000356805 TRAV12-1A0A0B4J245 112 aa9.4□□□□□ -0.9
SPTBN1-202ENST00000356805 SELLP14151 372 aa9.4□□□□□ -0.9
SPTBN1-202ENST00000356805 AZU1P20160 251 aa9.4□□□□□ -0.9
SPTBN1-202ENST00000356805 TMEM158Q8WZ71 300 aa9.4□□□□□ -0.9
SPTBN1-202ENST00000356805 PFN2P35080 140 aa9.4□□□□□ -0.9
SPTBN1-202ENST00000356805 RNF5Q99942 180 aa9.4□□□□□ -0.9
SPTBN1-202ENST00000356805 LGALS9BQ3B8N2 356 aa9.4□□□□□ -0.9
SPTBN1-202ENST00000356805 LGALS9CQ6DKI2 356 aa9.4□□□□□ -0.9
SPTBN1-202ENST00000356805 BMPERQ8N8U9 685 aa9.4□□□□□ -0.91
SPTBN1-202ENST00000356805 IGHV2-70DA0A0C4DH43 119 aa9.4□□□□□ -0.91
SPTBN1-202ENST00000356805 SPACA3Q8IXA5 215 aa9.4□□□□□ -0.91
SPTBN1-202ENST00000356805 IGHV1-46P01743 117 aa9.39□□□□□ -0.91
SPTBN1-202ENST00000356805 ETDBQ3ZM63 59 aa9.39□□□□□ -0.91
SPTBN1-202ENST00000356805 ZNF672Q499Z4 452 aaPredicted RBP9.39□□□□□ -0.91
SPTBN1-202ENST00000356805 DSCR8Q96T75 97 aa9.39□□□□□ -0.91
SPTBN1-202ENST00000356805 IL18BPO95998 194 aa9.39□□□□□ -0.91
SPTBN1-202ENST00000356805 IGHV1-3A0A0C4DH29 117 aa9.39□□□□□ -0.91
SPTBN1-202ENST00000356805 DAD1P61803 113 aa9.39□□□□□ -0.91
SPTBN1-202ENST00000356805 IGHG3P01860 377 aa9.39□□□□□ -0.91
SPTBN1-202ENST00000356805 LYZL4Q96KX0 146 aa9.39□□□□□ -0.91
SPTBN1-202ENST00000356805 RLFQ13129 1914 aa9.39□□□□□ -0.91
SPTBN1-202ENST00000356805 A0A0G2JMZ2 1700 aa9.39□□□□□ -0.91
SPTBN1-202ENST00000356805 LRRC37A2A6NM11 1700 aa9.39□□□□□ -0.91
SPTBN1-202ENST00000356805 LRRC37AA6NMS7 1700 aa9.39□□□□□ -0.91
SPTBN1-202ENST00000356805 TCTEX1D4Q5JR98 221 aa9.39□□□□□ -0.91
SPTBN1-202ENST00000356805 C22orf46C9J442 243 aa9.38□□□□□ -0.91
SPTBN1-202ENST00000356805 FOXF2Q12947 444 aa9.38□□□□□ -0.91
SPTBN1-202ENST00000356805 LINC00477Q96M19 166 aa9.38□□□□□ -0.91
SPTBN1-202ENST00000356805 RNF114Q9Y508 228 aa9.38□□□□□ -0.91
SPTBN1-202ENST00000356805 QRFPP83859 136 aa9.38□□□□□ -0.91
SPTBN1-202ENST00000356805 IGKV1D-8A0A087WSZ0 117 aa9.38□□□□□ -0.91
SPTBN1-202ENST00000356805 C10orf55Q5SWW7 151 aa9.38□□□□□ -0.91
SPTBN1-202ENST00000356805 SOCS3O14543 225 aa9.38□□□□□ -0.91
SPTBN1-202ENST00000356805 DKK1O94907 266 aa9.38□□□□□ -0.91
SPTBN1-202ENST00000356805 ACYP1P07311 99 aa9.38□□□□□ -0.91
SPTBN1-202ENST00000356805 RNF166Q96A37 237 aaPredicted RBP9.38□□□□□ -0.91
SPTBN1-202ENST00000356805 NDUFC2O95298 119 aa9.38□□□□□ -0.91
SPTBN1-202ENST00000356805 GNLYP22749 145 aa9.38□□□□□ -0.91
SPTBN1-202ENST00000356805 TMEM258P61165 79 aa9.38□□□□□ -0.91
SPTBN1-202ENST00000356805 SRSF8Q9BRL6 282 aaKnown RBP9.38□□□□□ -0.91
SPTBN1-202ENST00000356805 IGHG4P01861 327 aa9.38□□□□□ -0.91
SPTBN1-202ENST00000356805 Q6ZWC4 215 aa9.38□□□□□ -0.91
SPTBN1-202ENST00000356805 Q71RC1 249 aaPredicted RBP9.38□□□□□ -0.91
SPTBN1-202ENST00000356805 MCRIP2Q9BUT9 160 aaKnown RBP9.38□□□□□ -0.91
SPTBN1-202ENST00000356805 TCF15Q12870 199 aa9.37□□□□□ -0.91
SPTBN1-202ENST00000356805 LINC01545Q5VT33 79 aa9.37□□□□□ -0.91
SPTBN1-202ENST00000356805 FRMPD3Q5JV73 1810 aa9.37□□□□□ -0.91
SPTBN1-202ENST00000356805 BVES-AS1Q5T3Y7 98 aa9.37□□□□□ -0.91
SPTBN1-202ENST00000356805 IGHV1-8P0DP01 117 aa9.37□□□□□ -0.91
SPTBN1-202ENST00000356805 MRPL14Q6P1L8 145 aaKnown RBP9.37□□□□□ -0.91
SPTBN1-202ENST00000356805 IGKV1-5P01602 117 aa9.37□□□□□ -0.91
SPTBN1-202ENST00000356805 E9PLN8 166 aa9.37□□□□□ -0.91
SPTBN1-202ENST00000356805 CRYGSP22914 178 aa9.37□□□□□ -0.91
SPTBN1-202ENST00000356805 TMEM141Q96I45 108 aa9.37□□□□□ -0.91
SPTBN1-202ENST00000356805 CLPSL2Q6UWE3 100 aa9.36□□□□□ -0.91
SPTBN1-202ENST00000356805 DEFB105AQ8NG35 78 aa9.36□□□□□ -0.91
SPTBN1-202ENST00000356805 HLA-DMBP28068 263 aa9.36□□□□□ -0.91
SPTBN1-202ENST00000356805 SYNJ2BPP57105 145 aa9.36□□□□□ -0.91
SPTBN1-202ENST00000356805 HAMPP81172 84 aa9.36□□□□□ -0.91
SPTBN1-202ENST00000356805 LYPD6BQ8NI32 183 aa9.36□□□□□ -0.91
SPTBN1-202ENST00000356805 ACACAQ13085 2346 aa9.36□□□□□ -0.91
SPTBN1-202ENST00000356805 B4DSR2 109 aa9.36□□□□□ -0.91
SPTBN1-202ENST00000356805 FAM223BA6NKX1 122 aa9.36□□□□□ -0.91
SPTBN1-202ENST00000356805 FAM223AQ8IWN6 122 aa9.36□□□□□ -0.91
SPTBN1-202ENST00000356805 LY6G5BQ8NDX9 201 aa9.36□□□□□ -0.91
SPTBN1-202ENST00000356805 MDS2Q8NDY4 140 aa9.35□□□□□ -0.91
SPTBN1-202ENST00000356805 C5orf47Q569G3 176 aa9.35□□□□□ -0.91
SPTBN1-202ENST00000356805 XCL2Q9UBD3 114 aa9.35□□□□□ -0.91
SPTBN1-202ENST00000356805 TRBV25-1A0A075B6N4 114 aa9.35□□□□□ -0.91
SPTBN1-202ENST00000356805 EFNA4P52798 201 aa9.35□□□□□ -0.91
SPTBN1-202ENST00000356805 DEFB125Q8N687 156 aa9.35□□□□□ -0.91
SPTBN1-202ENST00000356805 LINC01356Q8N9X3 169 aa9.35□□□□□ -0.91
SPTBN1-202ENST00000356805 LIME1Q9H400 295 aa9.35□□□□□ -0.91
SPTBN1-202ENST00000356805 CACNA1EQ15878 2313 aa9.35□□□□□ -0.91
SPTBN1-202ENST00000356805 USMG5Q96IX5 58 aa9.35□□□□□ -0.91
SPTBN1-202ENST00000356805 C9JQL5 133 aa9.35□□□□□ -0.91
SPTBN1-202ENST00000356805 IL17RELQ6ZVW7 336 aa9.35□□□□□ -0.91
SPTBN1-202ENST00000356805 KNCNA6PVL3 124 aa9.35□□□□□ -0.91
SPTBN1-202ENST00000356805 C9orf139Q6ZV77 190 aa9.35□□□□□ -0.91
SPTBN1-202ENST00000356805 TMEM75Q8N9X5 138 aa9.35□□□□□ -0.91
SPTBN1-202ENST00000356805 FAM110DQ8TAY7 271 aaPredicted RBP9.35□□□□□ -0.91
SPTBN1-202ENST00000356805 SCRT2Q9NQ03 307 aa9.35□□□□□ -0.91
SPTBN1-202ENST00000356805 A0A1W2PR77 199 aa9.35□□□□□ -0.91
SPTBN1-202ENST00000356805 IGLL1P15814 213 aa9.34□□□□□ -0.91
SPTBN1-202ENST00000356805 MAPK1IP1LQ8NDC0 245 aa9.34□□□□□ -0.91
SPTBN1-202ENST00000356805 UBL5Q9BZL1 73 aa9.34□□□□□ -0.91
SPTBN1-202ENST00000356805 PKDREJQ9NTG1 2253 aa9.34□□□□□ -0.91
SPTBN1-202ENST00000356805 IGLV3-12A0A075B6K2 115 aa9.34□□□□□ -0.91
SPTBN1-202ENST00000356805 TMEM178BH3BS89 294 aa9.34□□□□□ -0.91
SPTBN1-202ENST00000356805 BUB1B-PAK6H3BSN5 160 aa9.34□□□□□ -0.91
SPTBN1-202ENST00000356805 K7EMI3 77 aa9.34□□□□□ -0.91
SPTBN1-202ENST00000356805 STPG4Q8N801 248 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms