RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 C5orf64Q2M2E5 130 aa10.33□□□□□ -0.76
COL18A1-201ENST00000342220 ASPHD1Q5U4P2 390 aa10.33□□□□□ -0.76
COL18A1-201ENST00000342220 ZNF329Q86UD4 541 aa10.33□□□□□ -0.76
COL18A1-201ENST00000342220 SIRPDQ9H106 197 aa10.33□□□□□ -0.76
COL18A1-201ENST00000342220 TMEM167BQ9NRX6 74 aa10.33□□□□□ -0.76
COL18A1-201ENST00000342220 TECRQ9NZ01 308 aaKnown RBP10.33□□□□□ -0.76
COL18A1-201ENST00000342220 LY96Q9Y6Y9 160 aa10.33□□□□□ -0.76
COL18A1-201ENST00000342220 TRAV9-1A0A075B6T8 112 aa10.32□□□□□ -0.76
COL18A1-201ENST00000342220 GGTLC3B5MD39 225 aa10.32□□□□□ -0.76
COL18A1-201ENST00000342220 IGHV3-11P01762 117 aa10.32□□□□□ -0.76
COL18A1-201ENST00000342220 PLP1P60201 277 aa10.32□□□□□ -0.76
COL18A1-201ENST00000342220 SMPXQ9UHP9 88 aa10.32□□□□□ -0.76
COL18A1-201ENST00000342220 CGB1A6NKQ9 187 aa10.32□□□□□ -0.76
COL18A1-201ENST00000342220 CD69Q07108 199 aa10.32□□□□□ -0.76
COL18A1-201ENST00000342220 SLAQ13239 276 aa10.32□□□□□ -0.76
COL18A1-201ENST00000342220 WFDC11Q8NEX6 87 aa10.32□□□□□ -0.76
COL18A1-201ENST00000342220 SIGMAR1Q99720 223 aa10.32□□□□□ -0.76
COL18A1-201ENST00000342220 SRIP30626 198 aa10.32□□□□□ -0.76
COL18A1-201ENST00000342220 OR11H6Q8NGC7 330 aa10.32□□□□□ -0.76
COL18A1-201ENST00000342220 ARPC1AQ92747 370 aa10.32□□□□□ -0.76
COL18A1-201ENST00000342220 PYYP10082 97 aa10.31□□□□□ -0.76
COL18A1-201ENST00000342220 UBE2E1P51965 193 aa10.31□□□□□ -0.76
COL18A1-201ENST00000342220 MORN5Q5VZ52 161 aa10.31□□□□□ -0.76
COL18A1-201ENST00000342220 ZNF257Q9Y2Q1 563 aa10.31□□□□□ -0.76
COL18A1-201ENST00000342220 FAM231BA6NCW3 169 aa10.31□□□□□ -0.76
COL18A1-201ENST00000342220 B4DSR2 109 aa10.31□□□□□ -0.76
COL18A1-201ENST00000342220 FNDC10F2Z333 226 aa10.31□□□□□ -0.76
COL18A1-201ENST00000342220 MGST1P10620 155 aaKnown RBP10.31□□□□□ -0.76
COL18A1-201ENST00000342220 KHDC1LQ5JSQ8 128 aa10.31□□□□□ -0.76
COL18A1-201ENST00000342220 GTF2H5Q6ZYL4 71 aa10.31□□□□□ -0.76
COL18A1-201ENST00000342220 TEX45Q8NA69 505 aa10.31□□□□□ -0.76
COL18A1-201ENST00000342220 NHLRC2Q8NBF2 726 aa10.31□□□□□ -0.76
COL18A1-201ENST00000342220 C7orf71A4D174 169 aa10.31□□□□□ -0.76
COL18A1-201ENST00000342220 MFAP2P55001 183 aa10.31□□□□□ -0.76
COL18A1-201ENST00000342220 TIGITQ495A1 244 aa10.31□□□□□ -0.76
COL18A1-201ENST00000342220 C8orf46Q8TAG6 207 aa10.31□□□□□ -0.76
COL18A1-201ENST00000342220 C2orf83Q53S99 150 aa10.3□□□□□ -0.76
COL18A1-201ENST00000342220 C12orf54Q6X4T0 127 aa10.3□□□□□ -0.76
COL18A1-201ENST00000342220 TSKUQ8WUA8 353 aa10.3□□□□□ -0.76
COL18A1-201ENST00000342220 SERTAD4Q9NUC0 356 aa10.3□□□□□ -0.76
COL18A1-201ENST00000342220 A0A087X0K7 114 aa10.3□□□□□ -0.76
COL18A1-201ENST00000342220 PLA2G2AP14555 144 aa10.3□□□□□ -0.76
COL18A1-201ENST00000342220 BLCAPP62952 87 aa10.3□□□□□ -0.76
COL18A1-201ENST00000342220 C11orf44Q8N8P7 122 aa10.3□□□□□ -0.76
COL18A1-201ENST00000342220 GNB1LQ9BYB4 327 aa10.3□□□□□ -0.76
COL18A1-201ENST00000342220 BEX4Q9NWD9 120 aaPredicted RBP10.3□□□□□ -0.76
COL18A1-201ENST00000342220 CA1P00915 261 aaPredicted RBP10.29□□□□□ -0.76
COL18A1-201ENST00000342220 IGLV2-8P01709 118 aa10.29□□□□□ -0.76
COL18A1-201ENST00000342220 MRPL54Q6P161 138 aaKnown RBP10.29□□□□□ -0.76
COL18A1-201ENST00000342220 LINC00479Q96M42 142 aa10.29□□□□□ -0.76
COL18A1-201ENST00000342220 IGHV1-69DA0A0B4J2H0 117 aa10.29□□□□□ -0.76
COL18A1-201ENST00000342220 ATP6V0E1O15342 81 aa10.29□□□□□ -0.76
COL18A1-201ENST00000342220 CD5LO43866 347 aa10.29□□□□□ -0.76
COL18A1-201ENST00000342220 IGHV1-69P01742 117 aa10.29□□□□□ -0.76
COL18A1-201ENST00000342220 TAS2R45P59539 299 aa10.29□□□□□ -0.76
COL18A1-201ENST00000342220 TCF24Q7RTU0 167 aa10.29□□□□□ -0.76
COL18A1-201ENST00000342220 CIARTQ8N365 385 aaPredicted RBP10.29□□□□□ -0.76
COL18A1-201ENST00000342220 OR4A5Q8NH83 315 aa10.29□□□□□ -0.76
COL18A1-201ENST00000342220 ASCL2Q99929 193 aa10.29□□□□□ -0.76
COL18A1-201ENST00000342220 C1RLQ9NZP8 487 aa10.29□□□□□ -0.76
COL18A1-201ENST00000342220 hDV102S1A0JD36 115 aa10.29□□□□□ -0.76
COL18A1-201ENST00000342220 HSBP1O75506 76 aa10.29□□□□□ -0.76
COL18A1-201ENST00000342220 C8orf88P0DMB2 117 aa10.29□□□□□ -0.76
COL18A1-201ENST00000342220 GPR183P32249 361 aa10.29□□□□□ -0.76
COL18A1-201ENST00000342220 UBE2L3P68036 154 aaKnown RBP10.29□□□□□ -0.76
COL18A1-201ENST00000342220 TMEM136Q6ZRR5 245 aa10.29□□□□□ -0.76
COL18A1-201ENST00000342220 OSTCQ9NRP0 149 aa10.29□□□□□ -0.76
COL18A1-201ENST00000342220 IBA57Q5T440 356 aaKnown RBP10.28□□□□□ -0.76
COL18A1-201ENST00000342220 SLC25A34Q6PIV7 304 aa10.28□□□□□ -0.76
COL18A1-201ENST00000342220 CFHR4Q92496 578 aa10.28□□□□□ -0.76
COL18A1-201ENST00000342220 M0R2Z0 102 aa10.28□□□□□ -0.76
COL18A1-201ENST00000342220 PF4V1P10720 104 aa10.28□□□□□ -0.76
COL18A1-201ENST00000342220 IGF2BP2-AS1Q96M15 143 aa10.28□□□□□ -0.76
COL18A1-201ENST00000342220 SLC25A2Q9BXI2 301 aa10.28□□□□□ -0.76
COL18A1-201ENST00000342220 TRBV9A0A0B4J1U6 114 aa10.28□□□□□ -0.76
COL18A1-201ENST00000342220 LY6LH3BQJ8 138 aa10.28□□□□□ -0.76
COL18A1-201ENST00000342220 IGHV4-59P01825 116 aa10.28□□□□□ -0.76
COL18A1-201ENST00000342220 DEFB113Q30KQ7 82 aa10.28□□□□□ -0.76
COL18A1-201ENST00000342220 FAM167A-AS1Q96KT0 104 aa10.28□□□□□ -0.76
COL18A1-201ENST00000342220 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.27□□□□□ -0.77
COL18A1-201ENST00000342220 FBLL1A6NHQ2 334 aaKnown RBP10.27□□□□□ -0.77
COL18A1-201ENST00000342220 IL4P05112 153 aa10.27□□□□□ -0.77
COL18A1-201ENST00000342220 ZNF137PP52743 207 aa10.27□□□□□ -0.77
COL18A1-201ENST00000342220 C10orf113Q5VZT2 155 aa10.27□□□□□ -0.77
COL18A1-201ENST00000342220 EBLN2Q6P2I7 272 aa10.27□□□□□ -0.77
COL18A1-201ENST00000342220 LINC00305Q7Z4B0 112 aa10.27□□□□□ -0.77
COL18A1-201ENST00000342220 A0A1W2PRE2 83 aa10.27□□□□□ -0.77
COL18A1-201ENST00000342220 H3BUT2 72 aa10.27□□□□□ -0.77
COL18A1-201ENST00000342220 K7EQM0 130 aa10.27□□□□□ -0.77
COL18A1-201ENST00000342220 ISLRO14498 428 aa10.27□□□□□ -0.77
COL18A1-201ENST00000342220 SNAI2O43623 268 aa10.27□□□□□ -0.77
COL18A1-201ENST00000342220 SCGB1A1P11684 91 aa10.27□□□□□ -0.77
COL18A1-201ENST00000342220 UBE2G1P62253 170 aa10.27□□□□□ -0.77
COL18A1-201ENST00000342220 Q6ZS46 218 aa10.27□□□□□ -0.77
COL18A1-201ENST00000342220 PSMB11A5LHX3 300 aa10.26□□□□□ -0.77
COL18A1-201ENST00000342220 ODF3BA8MYP8 253 aa10.26□□□□□ -0.77
COL18A1-201ENST00000342220 RPL11P62913 178 aaKnown RBP10.26□□□□□ -0.77
COL18A1-201ENST00000342220 OR10J3Q5JRS4 329 aa10.26□□□□□ -0.77
COL18A1-201ENST00000342220 CLEC19AQ6UXS0 136 aa10.26□□□□□ -0.77
COL18A1-201ENST00000342220 OR4C46A6NHA9 309 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms