RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 M0QZ24 198 aa13.22□□□□□ -0.29
CLDN4-201ENST00000340958 LGALS9O00182 355 aa13.22□□□□□ -0.29
CLDN4-201ENST00000340958 RHEBQ15382 184 aa13.22□□□□□ -0.29
CLDN4-201ENST00000340958 GLMPQ8WWB7 406 aa13.22□□□□□ -0.29
CLDN4-201ENST00000340958 A0A087X0K7 114 aa13.21□□□□□ -0.29
CLDN4-201ENST00000340958 K7EQM0 130 aa13.21□□□□□ -0.29
CLDN4-201ENST00000340958 CHEK1O14757 476 aa13.21□□□□□ -0.29
CLDN4-201ENST00000340958 TCRAP04437 139 aa13.21□□□□□ -0.29
CLDN4-201ENST00000340958 LINC00479Q96M42 142 aa13.21□□□□□ -0.29
CLDN4-201ENST00000340958 IGKV3-7A0A075B6H7 116 aa13.2□□□□□ -0.3
CLDN4-201ENST00000340958 PROK1P58294 105 aa13.2□□□□□ -0.3
CLDN4-201ENST00000340958 SNRPEP62304 92 aaKnown RBP13.2□□□□□ -0.3
CLDN4-201ENST00000340958 CENPWQ5EE01 88 aa13.2□□□□□ -0.3
CLDN4-201ENST00000340958 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.2□□□□□ -0.3
CLDN4-201ENST00000340958 C16orf92Q96LL3 132 aa13.2□□□□□ -0.3
CLDN4-201ENST00000340958 SLC50A1Q9BRV3 221 aa13.2□□□□□ -0.3
CLDN4-201ENST00000340958 AURKAIP1Q9NWT8 199 aaPredicted RBP13.2□□□□□ -0.3
CLDN4-201ENST00000340958 PEMTQ9UBM1 199 aa13.2□□□□□ -0.3
CLDN4-201ENST00000340958 SELENOKQ9Y6D0 94 aa13.2□□□□□ -0.3
CLDN4-201ENST00000340958 TRAV34A0A0B4J273 112 aa13.2□□□□□ -0.3
CLDN4-201ENST00000340958 TMEM213A2RRL7 107 aa13.2□□□□□ -0.3
CLDN4-201ENST00000340958 UBE2CO00762 179 aa13.2□□□□□ -0.3
CLDN4-201ENST00000340958 ZNF253O75346 499 aa13.2□□□□□ -0.3
CLDN4-201ENST00000340958 RPL23P62829 140 aaKnown RBP13.2□□□□□ -0.3
CLDN4-201ENST00000340958 KLF5Q13887 457 aaPredicted RBP13.2□□□□□ -0.3
CLDN4-201ENST00000340958 GOLT1AQ6ZVE7 132 aa13.2□□□□□ -0.3
CLDN4-201ENST00000340958 SGK494Q96LW2 274 aa13.2□□□□□ -0.3
CLDN4-201ENST00000340958 ZNF331Q9NQX6 463 aaPredicted RBP13.2□□□□□ -0.3
CLDN4-201ENST00000340958 ANK2Q01484 3957 aa13.2□□□□□ -0.3
CLDN4-201ENST00000340958 PGPEP1LA6NFU8 196 aa13.19□□□□□ -0.3
CLDN4-201ENST00000340958 A8MWP6 167 aa13.19□□□□□ -0.3
CLDN4-201ENST00000340958 B4DEV8 164 aa13.19□□□□□ -0.3
CLDN4-201ENST00000340958 EDN2P20800 178 aa13.19□□□□□ -0.3
CLDN4-201ENST00000340958 TAS2R60P59551 318 aa13.19□□□□□ -0.3
CLDN4-201ENST00000340958 IGFL4Q6B9Z1 124 aa13.19□□□□□ -0.3
CLDN4-201ENST00000340958 A0A1B0GUS0 222 aa13.18□□□□□ -0.3
CLDN4-201ENST00000340958 C9JCJ5 164 aa13.18□□□□□ -0.3
CLDN4-201ENST00000340958 M0R3E3 92 aa13.18□□□□□ -0.3
CLDN4-201ENST00000340958 S100A9P06702 114 aaKnown RBP13.18□□□□□ -0.3
CLDN4-201ENST00000340958 TCF24Q7RTU0 167 aa13.18□□□□□ -0.3
CLDN4-201ENST00000340958 ISOC2Q96AB3 205 aa13.18□□□□□ -0.3
CLDN4-201ENST00000340958 C2orf70A6NJV1 201 aa13.18□□□□□ -0.3
CLDN4-201ENST00000340958 CCL24O00175 119 aa13.18□□□□□ -0.3
CLDN4-201ENST00000340958 PRB4P10163 310 aaPredicted RBP13.18□□□□□ -0.3
CLDN4-201ENST00000340958 RAB5AP20339 215 aa13.18□□□□□ -0.3
CLDN4-201ENST00000340958 CBLN1P23435 193 aa13.18□□□□□ -0.3
CLDN4-201ENST00000340958 NSUN5P1Q3KNT7 163 aa13.18□□□□□ -0.3
CLDN4-201ENST00000340958 LINC01551Q86U37 167 aa13.18□□□□□ -0.3
CLDN4-201ENST00000340958 SPATA3Q8NHX4 192 aa13.18□□□□□ -0.3
CLDN4-201ENST00000340958 FMC1Q96HJ9 113 aa13.18□□□□□ -0.3
CLDN4-201ENST00000340958 RAX2Q96IS3 184 aa13.18□□□□□ -0.3
CLDN4-201ENST00000340958 TRBV20OR9-2A0A075B6H5 130 aa13.17□□□□□ -0.3
CLDN4-201ENST00000340958 ISLRO14498 428 aa13.17□□□□□ -0.3
CLDN4-201ENST00000340958 MGST1P10620 155 aaKnown RBP13.17□□□□□ -0.3
CLDN4-201ENST00000340958 TMEM183BQ1AE95 376 aa13.17□□□□□ -0.3
CLDN4-201ENST00000340958 BAGE2Q86Y30 109 aa13.17□□□□□ -0.3
CLDN4-201ENST00000340958 OCC1Q8TAD7 63 aa13.17□□□□□ -0.3
CLDN4-201ENST00000340958 YPEL4Q96NS1 127 aa13.17□□□□□ -0.3
CLDN4-201ENST00000340958 NRN1Q9NPD7 142 aa13.17□□□□□ -0.3
CLDN4-201ENST00000340958 DIRC3C9JPN6 131 aa13.16□□□□□ -0.3
CLDN4-201ENST00000340958 S100A8P05109 93 aa13.16□□□□□ -0.3
CLDN4-201ENST00000340958 HLA-DMBP28068 263 aa13.16□□□□□ -0.3
CLDN4-201ENST00000340958 RNF182Q8N6D2 247 aa13.16□□□□□ -0.3
CLDN4-201ENST00000340958 OR9G4Q8NGQ1 327 aa13.16□□□□□ -0.3
CLDN4-201ENST00000340958 DLX4Q92988 240 aaPredicted RBP13.16□□□□□ -0.3
CLDN4-201ENST00000340958 FOXL1Q12952 345 aa13.16□□□□□ -0.3
CLDN4-201ENST00000340958 LCN12Q6JVE5 192 aa13.16□□□□□ -0.3
CLDN4-201ENST00000340958 PRNTQ86SH4 94 aa13.16□□□□□ -0.3
CLDN4-201ENST00000340958 GBGT1Q8N5D6 347 aa13.16□□□□□ -0.3
CLDN4-201ENST00000340958 NHLRC2Q8NBF2 726 aa13.16□□□□□ -0.3
CLDN4-201ENST00000340958 SERTM2A0A1B0GWG4 89 aa13.15□□□□□ -0.3
CLDN4-201ENST00000340958 ZNF705FA8MVS1 300 aaPredicted RBP13.15□□□□□ -0.3
CLDN4-201ENST00000340958 S100A6P06703 90 aa13.15□□□□□ -0.3
CLDN4-201ENST00000340958 SMIM6P0DI80 62 aa13.15□□□□□ -0.3
CLDN4-201ENST00000340958 WFDC3Q8IUB2 231 aa13.15□□□□□ -0.3
CLDN4-201ENST00000340958 FAM24BQ8N5W8 94 aa13.15□□□□□ -0.3
CLDN4-201ENST00000340958 CLEC5AQ9NY25 188 aa13.15□□□□□ -0.3
CLDN4-201ENST00000340958 LY96Q9Y6Y9 160 aa13.15□□□□□ -0.3
CLDN4-201ENST00000340958 TRAV8-1A0A0A6YYK1 113 aa13.14□□□□□ -0.31
CLDN4-201ENST00000340958 DYNLRB2Q8TF09 96 aa13.14□□□□□ -0.31
CLDN4-201ENST00000340958 IGF2BP2-AS1Q96M15 143 aa13.14□□□□□ -0.31
CLDN4-201ENST00000340958 TFPI2P48307 235 aa13.13□□□□□ -0.31
CLDN4-201ENST00000340958 TMEM75Q8N9X5 138 aa13.13□□□□□ -0.31
CLDN4-201ENST00000340958 KLF12Q9Y4X4 402 aa13.13□□□□□ -0.31
CLDN4-201ENST00000340958 IGKV2-40A0A087WW87 121 aaPredicted RBP13.13□□□□□ -0.31
CLDN4-201ENST00000340958 A0A087WWC5 75 aa13.13□□□□□ -0.31
CLDN4-201ENST00000340958 IGKV2D-40P01614 121 aaPredicted RBP13.13□□□□□ -0.31
CLDN4-201ENST00000340958 ID1P41134 155 aa13.13□□□□□ -0.31
CLDN4-201ENST00000340958 PSG3Q16557 428 aa13.13□□□□□ -0.31
CLDN4-201ENST00000340958 SAMD13Q5VXD3 122 aa13.13□□□□□ -0.31
CLDN4-201ENST00000340958 ZNF738Q8NE65 137 aa13.13□□□□□ -0.31
CLDN4-201ENST00000340958 TRAV8-2A0A0B4J237 113 aa13.12□□□□□ -0.31
CLDN4-201ENST00000340958 ERVFC1-1P60608 527 aa13.12□□□□□ -0.31
CLDN4-201ENST00000340958 PAFAH1B2P68402 229 aa13.12□□□□□ -0.31
CLDN4-201ENST00000340958 FABP9Q0Z7S8 132 aa13.12□□□□□ -0.31
CLDN4-201ENST00000340958 OR5I1Q13606 314 aa13.12□□□□□ -0.31
CLDN4-201ENST00000340958 NDUFA11Q86Y39 141 aa13.12□□□□□ -0.31
CLDN4-201ENST00000340958 ARL6IP6Q8N6S5 226 aa13.12□□□□□ -0.31
CLDN4-201ENST00000340958 ANAPC16Q96DE5 110 aa13.12□□□□□ -0.31
CLDN4-201ENST00000340958 SFRP2Q96HF1 295 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms