RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 ZNF253O75346 499 aa6.59□□□□□ -1.35
HMGN1-201ENST00000288344 PLA2G1BP04054 148 aaKnown RBP6.59□□□□□ -1.35
HMGN1-201ENST00000288344 BPIFA4PQ86YQ2 179 aa6.59□□□□□ -1.35
HMGN1-201ENST00000288344 OR1L4Q8NGR5 311 aa6.59□□□□□ -1.35
HMGN1-201ENST00000288344 SVIPQ8NHG7 77 aa6.59□□□□□ -1.35
HMGN1-201ENST00000288344 PFDN5Q99471 154 aa6.59□□□□□ -1.35
HMGN1-201ENST00000288344 SLC35B3Q9H1N7 401 aa6.59□□□□□ -1.35
HMGN1-201ENST00000288344 RPRMQ9NS64 109 aa6.59□□□□□ -1.35
HMGN1-201ENST00000288344 CLEC5AQ9NY25 188 aa6.59□□□□□ -1.35
HMGN1-201ENST00000288344 XCL2Q9UBD3 114 aa6.59□□□□□ -1.35
HMGN1-201ENST00000288344 RNF24Q9Y225 148 aa6.59□□□□□ -1.35
HMGN1-201ENST00000288344 TRBV19A0A075B6N1 114 aa6.58□□□□□ -1.36
HMGN1-201ENST00000288344 SNRPCP09234 159 aaKnown RBP6.58□□□□□ -1.36
HMGN1-201ENST00000288344 PET100P0DJ07 73 aa6.58□□□□□ -1.36
HMGN1-201ENST00000288344 HIST1H1EP10412 219 aaKnown RBP6.58□□□□□ -1.36
HMGN1-201ENST00000288344 CNN1P51911 297 aaKnown RBP6.58□□□□□ -1.36
HMGN1-201ENST00000288344 PSG9Q00887 426 aa6.58□□□□□ -1.36
HMGN1-201ENST00000288344 LCN15Q6UWW0 184 aa6.58□□□□□ -1.36
HMGN1-201ENST00000288344 MIR17HGQ75NE6 70 aa6.58□□□□□ -1.36
HMGN1-201ENST00000288344 S100A7AQ86SG5 101 aa6.58□□□□□ -1.36
HMGN1-201ENST00000288344 OR8A1Q8NGG7 326 aa6.58□□□□□ -1.36
HMGN1-201ENST00000288344 FXYD5Q96DB9 178 aa6.58□□□□□ -1.36
HMGN1-201ENST00000288344 FAM19A4Q96LR4 140 aa6.58□□□□□ -1.36
HMGN1-201ENST00000288344 TNFSF18Q9UNG2 199 aa6.58□□□□□ -1.36
HMGN1-201ENST00000288344 FRAS1Q86XX4 4008 aa6.58□□□□□ -1.36
HMGN1-201ENST00000288344 IGHV4-28A0A0C4DH34 117 aa6.57□□□□□ -1.36
HMGN1-201ENST00000288344 PYYP10082 97 aa6.57□□□□□ -1.36
HMGN1-201ENST00000288344 MIFP14174 115 aa6.57□□□□□ -1.36
HMGN1-201ENST00000288344 GUK1Q16774 197 aa6.57□□□□□ -1.36
HMGN1-201ENST00000288344 ZFAND6Q6FIF0 208 aa6.57□□□□□ -1.36
HMGN1-201ENST00000288344 SLC50A1Q9BRV3 221 aa6.57□□□□□ -1.36
HMGN1-201ENST00000288344 SMIM3Q9BZL3 60 aa6.57□□□□□ -1.36
HMGN1-201ENST00000288344 CYTL1Q9NRR1 136 aa6.57□□□□□ -1.36
HMGN1-201ENST00000288344 FAT2Q9NYQ8 4349 aa6.57□□□□□ -1.36
HMGN1-201ENST00000288344 DNAH17Q9UFH2 4485 aa6.57□□□□□ -1.36
HMGN1-201ENST00000288344 EPPK1P58107 5090 aaKnown RBP6.56□□□□□ -1.36
HMGN1-201ENST00000288344 H3BTX0 84 aa6.56□□□□□ -1.36
HMGN1-201ENST00000288344 IGKV3-20P01619 116 aa6.56□□□□□ -1.36
HMGN1-201ENST00000288344 FXYD7P58549 80 aa6.56□□□□□ -1.36
HMGN1-201ENST00000288344 PDE6HQ13956 83 aa6.56□□□□□ -1.36
HMGN1-201ENST00000288344 RPP25LQ8N5L8 163 aaKnown RBP6.56□□□□□ -1.36
HMGN1-201ENST00000288344 OR11H4Q8NGC9 324 aa6.56□□□□□ -1.36
HMGN1-201ENST00000288344 OR2G3Q8NGZ4 309 aa6.56□□□□□ -1.36
HMGN1-201ENST00000288344 SUN5Q8TC36 379 aa6.56□□□□□ -1.36
HMGN1-201ENST00000288344 RPUSD4Q96CM3 377 aaKnown RBP6.56□□□□□ -1.36
HMGN1-201ENST00000288344 MRPL53Q96EL3 112 aaKnown RBP6.56□□□□□ -1.36
HMGN1-201ENST00000288344 IGF2BP2-AS1Q96M15 143 aa6.56□□□□□ -1.36
HMGN1-201ENST00000288344 C1QTNF4Q9BXJ3 329 aa6.56□□□□□ -1.36
HMGN1-201ENST00000288344 FUT9Q9Y231 359 aa6.56□□□□□ -1.36
HMGN1-201ENST00000288344 TIMM9Q9Y5J7 89 aa6.56□□□□□ -1.36
HMGN1-201ENST00000288344 PLAC8L1A1L4L8 177 aa6.55□□□□□ -1.36
HMGN1-201ENST00000288344 SMIM9A6NGZ8 99 aa6.55□□□□□ -1.36
HMGN1-201ENST00000288344 NPIPB6E9PJ23 425 aa6.55□□□□□ -1.36
HMGN1-201ENST00000288344 M0R3E3 92 aa6.55□□□□□ -1.36
HMGN1-201ENST00000288344 DEFB4AO15263 64 aa6.55□□□□□ -1.36
HMGN1-201ENST00000288344 DUSP14O95147 198 aaKnown RBP6.55□□□□□ -1.36
HMGN1-201ENST00000288344 PRM2P04554 102 aa6.55□□□□□ -1.36
HMGN1-201ENST00000288344 NBEAP1P0C6P0 100 aa6.55□□□□□ -1.36
HMGN1-201ENST00000288344 PRB4P10163 310 aaPredicted RBP6.55□□□□□ -1.36
HMGN1-201ENST00000288344 NUTF2P61970 127 aaKnown RBP6.55□□□□□ -1.36
HMGN1-201ENST00000288344 FGL1Q08830 312 aa6.55□□□□□ -1.36
HMGN1-201ENST00000288344 EBLN2Q6P2I7 272 aa6.55□□□□□ -1.36
HMGN1-201ENST00000288344 OR4B1Q8NGF8 309 aa6.55□□□□□ -1.36
HMGN1-201ENST00000288344 OR2T35Q8NGX2 323 aa6.55□□□□□ -1.36
HMGN1-201ENST00000288344 MRPL32Q9BYC8 188 aaKnown RBP6.55□□□□□ -1.36
HMGN1-201ENST00000288344 OR51M1Q9H341 326 aa6.55□□□□□ -1.36
HMGN1-201ENST00000288344 LCE6AA0A183 80 aa6.54□□□□□ -1.36
HMGN1-201ENST00000288344 CT45A10P0DMU9 189 aa6.54□□□□□ -1.36
HMGN1-201ENST00000288344 ATP6V0CP27449 155 aa6.54□□□□□ -1.36
HMGN1-201ENST00000288344 NANOS2P60321 138 aaKnown RBP6.54□□□□□ -1.36
HMGN1-201ENST00000288344 C12orf74Q32Q52 190 aa6.54□□□□□ -1.36
HMGN1-201ENST00000288344 FFAR4Q5NUL3 377 aa6.54□□□□□ -1.36
HMGN1-201ENST00000288344 CEMP1Q6PRD7 247 aaPredicted RBP6.54□□□□□ -1.36
HMGN1-201ENST00000288344 KRTAP19-1Q8IUB9 90 aa6.54□□□□□ -1.36
HMGN1-201ENST00000288344 NUDT10Q8NFP7 164 aa6.54□□□□□ -1.36
HMGN1-201ENST00000288344 NUDT11Q96G61 164 aa6.54□□□□□ -1.36
HMGN1-201ENST00000288344 ODF3Q96PU9 254 aa6.54□□□□□ -1.36
HMGN1-201ENST00000288344 PSMG3Q9BT73 122 aaPredicted RBP6.54□□□□□ -1.36
HMGN1-201ENST00000288344 MFFQ9GZY8 342 aa6.54□□□□□ -1.36
HMGN1-201ENST00000288344 CELA1Q9UNI1 258 aa6.54□□□□□ -1.36
HMGN1-201ENST00000288344 C17orf112F2Z3M2 114 aa6.53□□□□□ -1.36
HMGN1-201ENST00000288344 M0R2Z0 102 aa6.53□□□□□ -1.36
HMGN1-201ENST00000288344 EIF3GO75821 320 aaKnown RBP eCLIP6.53□□□□□ -1.36
HMGN1-201ENST00000288344 IFNA5P01569 189 aa6.53□□□□□ -1.36
HMGN1-201ENST00000288344 AZU1P20160 251 aa6.53□□□□□ -1.36
HMGN1-201ENST00000288344 M6PRP20645 277 aa6.53□□□□□ -1.36
HMGN1-201ENST00000288344 SPINK13Q1W4C9 94 aa6.53□□□□□ -1.36
HMGN1-201ENST00000288344 Q6ZNX1 250 aa6.53□□□□□ -1.36
HMGN1-201ENST00000288344 C9orf47Q6ZRZ4 202 aa6.53□□□□□ -1.36
HMGN1-201ENST00000288344 EXOC3-AS1Q8N2X6 119 aa6.53□□□□□ -1.36
HMGN1-201ENST00000288344 ZNF738Q8NE65 137 aa6.53□□□□□ -1.36
HMGN1-201ENST00000288344 C11orf45Q8TAV5 145 aa6.53□□□□□ -1.36
HMGN1-201ENST00000288344 AGPAT4-IT1Q9H0P7 198 aa6.53□□□□□ -1.36
HMGN1-201ENST00000288344 KCNIP2Q9NS61 270 aa6.53□□□□□ -1.36
HMGN1-201ENST00000288344 PPP1R14DQ9NXH3 145 aa6.53□□□□□ -1.36
HMGN1-201ENST00000288344 HMSDA8MTL9 139 aa6.52□□□□□ -1.37
HMGN1-201ENST00000288344 KLLNB2CW77 178 aa6.52□□□□□ -1.37
HMGN1-201ENST00000288344 SMLR1H3BR10 107 aa6.52□□□□□ -1.37
HMGN1-201ENST00000288344 BOLA2-SMG1P6H3BVE0 249 aa6.52□□□□□ -1.37
HMGN1-201ENST00000288344 ZNF324O75467 553 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms