RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 C22orf46C9J442 243 aa12.69□□□□□ -0.38
SLC6A8-201ENST00000253122 ETDBQ3ZM63 59 aa12.69□□□□□ -0.38
SLC6A8-201ENST00000253122 ZC2HC1BQ5TFG8 222 aa12.69□□□□□ -0.38
SLC6A8-201ENST00000253122 ZNF502Q8TBZ5 544 aa12.69□□□□□ -0.38
SLC6A8-201ENST00000253122 URB1-AS1Q96HZ7 61 aa12.69□□□□□ -0.38
SLC6A8-201ENST00000253122 TEX48A0A1B0GUV7 120 aa12.69□□□□□ -0.38
SLC6A8-201ENST00000253122 TSSC4Q9Y5U2 329 aaPredicted RBP12.69□□□□□ -0.38
SLC6A8-201ENST00000253122 LOXL1Q08397 574 aaPredicted RBP12.68□□□□□ -0.38
SLC6A8-201ENST00000253122 FOXC1Q12948 553 aa12.68□□□□□ -0.38
SLC6A8-201ENST00000253122 C16orf97H3BN30 126 aa12.68□□□□□ -0.38
SLC6A8-201ENST00000253122 LYPD2Q6UXB3 125 aa12.68□□□□□ -0.38
SLC6A8-201ENST00000253122 ZNF418Q8TF45 676 aaPredicted RBP12.68□□□□□ -0.38
SLC6A8-201ENST00000253122 DSPP15924 2871 aaKnown RBP12.67□□□□□ -0.38
SLC6A8-201ENST00000253122 IGHV3-66A0A0C4DH42 116 aa12.67□□□□□ -0.38
SLC6A8-201ENST00000253122 AZU1P20160 251 aa12.67□□□□□ -0.38
SLC6A8-201ENST00000253122 IGHV3-49A0A0A0MS15 119 aa12.67□□□□□ -0.38
SLC6A8-201ENST00000253122 C17orf100A8MU93 164 aa12.67□□□□□ -0.38
SLC6A8-201ENST00000253122 IGKCP01834 107 aa12.67□□□□□ -0.38
SLC6A8-201ENST00000253122 CHAC1Q9BUX1 264 aa12.67□□□□□ -0.38
SLC6A8-201ENST00000253122 SH2D1AO60880 128 aa12.67□□□□□ -0.38
SLC6A8-201ENST00000253122 AMTNQ6UX39 209 aa12.67□□□□□ -0.38
SLC6A8-201ENST00000253122 H7C2G1 150 aa12.66□□□□□ -0.38
SLC6A8-201ENST00000253122 FAM104BQ5XKR9 115 aa12.66□□□□□ -0.38
SLC6A8-201ENST00000253122 ZNF833PQ6ZTB9 187 aa12.66□□□□□ -0.38
SLC6A8-201ENST00000253122 RITA1Q96K30 269 aa12.66□□□□□ -0.38
SLC6A8-201ENST00000253122 OR11H12B2RN74 326 aa12.66□□□□□ -0.38
SLC6A8-201ENST00000253122 DPM2O94777 84 aa12.66□□□□□ -0.38
SLC6A8-201ENST00000253122 NPYP01303 97 aa12.66□□□□□ -0.38
SLC6A8-201ENST00000253122 RPL7P18124 248 aaKnown RBP12.66□□□□□ -0.38
SLC6A8-201ENST00000253122 MRPL51Q4U2R6 128 aaKnown RBP12.66□□□□□ -0.38
SLC6A8-201ENST00000253122 ZNF474Q6S9Z5 364 aaPredicted RBP12.66□□□□□ -0.38
SLC6A8-201ENST00000253122 ASCL5Q7RTU5 278 aa12.66□□□□□ -0.38
SLC6A8-201ENST00000253122 THAP8Q8NA92 274 aa12.66□□□□□ -0.38
SLC6A8-201ENST00000253122 OR11H1Q8NG94 326 aa12.66□□□□□ -0.38
SLC6A8-201ENST00000253122 OR11H2Q8NH07 326 aa12.66□□□□□ -0.38
SLC6A8-201ENST00000253122 PTPRQQ9UMZ3 2332 aa12.65□□□□□ -0.38
SLC6A8-201ENST00000253122 IGLV1-44P01699 117 aa12.65□□□□□ -0.38
SLC6A8-201ENST00000253122 MFAP4P55083 255 aa12.65□□□□□ -0.38
SLC6A8-201ENST00000253122 LGALS9BQ3B8N2 356 aa12.65□□□□□ -0.38
SLC6A8-201ENST00000253122 LGALS9CQ6DKI2 356 aa12.65□□□□□ -0.38
SLC6A8-201ENST00000253122 MRPL16Q9NX20 251 aaKnown RBP12.65□□□□□ -0.38
SLC6A8-201ENST00000253122 LYNX1G3V0Z9 82 aa12.65□□□□□ -0.38
SLC6A8-201ENST00000253122 LYNX1P0DP58 116 aa12.65□□□□□ -0.38
SLC6A8-201ENST00000253122 IGKV1D-37A0A075B6S9 117 aa12.65□□□□□ -0.39
SLC6A8-201ENST00000253122 SIGLEC9Q9Y336 463 aa12.65□□□□□ -0.39
SLC6A8-201ENST00000253122 KLF12Q9Y4X4 402 aa12.65□□□□□ -0.39
SLC6A8-201ENST00000253122 CRXO43186 299 aaPredicted RBP12.64□□□□□ -0.39
SLC6A8-201ENST00000253122 COL27A1Q8IZC6 1860 aaPredicted RBP12.64□□□□□ -0.39
SLC6A8-201ENST00000253122 MGPP08493 103 aa12.64□□□□□ -0.39
SLC6A8-201ENST00000253122 GAGE13Q4V321 117 aa12.64□□□□□ -0.39
SLC6A8-201ENST00000253122 NPFFR1Q9GZQ6 430 aa12.64□□□□□ -0.39
SLC6A8-201ENST00000253122 G3V4G9 280 aa12.64□□□□□ -0.39
SLC6A8-201ENST00000253122 H3BMG7 143 aa12.64□□□□□ -0.39
SLC6A8-201ENST00000253122 APOMO95445 188 aa12.64□□□□□ -0.39
SLC6A8-201ENST00000253122 GP9P14770 177 aa12.64□□□□□ -0.39
SLC6A8-201ENST00000253122 IGF2-ASQ6U949 168 aa12.64□□□□□ -0.39
SLC6A8-201ENST00000253122 TMEM158Q8WZ71 300 aa12.64□□□□□ -0.39
SLC6A8-201ENST00000253122 DSCAMO60469 2012 aa12.63□□□□□ -0.39
SLC6A8-201ENST00000253122 C19orf71A6NCJ1 209 aa12.63□□□□□ -0.39
SLC6A8-201ENST00000253122 NDUFS7O75251 213 aa12.63□□□□□ -0.39
SLC6A8-201ENST00000253122 JMJD8Q96S16 334 aa12.63□□□□□ -0.39
SLC6A8-201ENST00000253122 PRSS22Q9GZN4 317 aa12.63□□□□□ -0.39
SLC6A8-201ENST00000253122 MYO9AB2RTY4 2548 aa12.63□□□□□ -0.39
SLC6A8-201ENST00000253122 TRBV19A0A075B6N1 114 aa12.63□□□□□ -0.39
SLC6A8-201ENST00000253122 TRAV40A0A0B4J280 105 aa12.63□□□□□ -0.39
SLC6A8-201ENST00000253122 MLST8Q9BVC4 326 aa12.63□□□□□ -0.39
SLC6A8-201ENST00000253122 CGB3P0DN86 165 aa12.63□□□□□ -0.39
SLC6A8-201ENST00000253122 CGB7P0DN87 165 aa12.63□□□□□ -0.39
SLC6A8-201ENST00000253122 SH2D6Q7Z4S9 175 aa12.63□□□□□ -0.39
SLC6A8-201ENST00000253122 TLN1Q9Y490 2541 aaKnown RBP12.62□□□□□ -0.39
SLC6A8-201ENST00000253122 WT1P19544 449 aaPredicted RBP12.62□□□□□ -0.39
SLC6A8-201ENST00000253122 FXYD2P54710 66 aa12.62□□□□□ -0.39
SLC6A8-201ENST00000253122 BSPH1Q075Z2 132 aa12.62□□□□□ -0.39
SLC6A8-201ENST00000253122 Q1RN00 199 aa12.62□□□□□ -0.39
SLC6A8-201ENST00000253122 TMEM75Q8N9X5 138 aa12.62□□□□□ -0.39
SLC6A8-201ENST00000253122 CEP295Q9C0D2 2601 aa12.62□□□□□ -0.39
SLC6A8-201ENST00000253122 ATP5LO75964 103 aa12.61□□□□□ -0.39
SLC6A8-201ENST00000253122 IGHV1-8P0DP01 117 aa12.61□□□□□ -0.39
SLC6A8-201ENST00000253122 RBPJQ06330 500 aa12.61□□□□□ -0.39
SLC6A8-201ENST00000253122 C2orf91Q6ZV80 131 aa12.61□□□□□ -0.39
SLC6A8-201ENST00000253122 NCOR1P1Q9H4R4 102 aa12.61□□□□□ -0.39
SLC6A8-201ENST00000253122 CYSLTR1Q9Y271 337 aa12.61□□□□□ -0.39
SLC6A8-201ENST00000253122 LHBP01229 141 aa12.61□□□□□ -0.39
SLC6A8-201ENST00000253122 IGHG3P01860 377 aa12.61□□□□□ -0.39
SLC6A8-201ENST00000253122 PSMB2P49721 201 aa12.61□□□□□ -0.39
SLC6A8-201ENST00000253122 CKS1BP61024 79 aa12.61□□□□□ -0.39
SLC6A8-201ENST00000253122 ECSCRQ19T08 205 aa12.61□□□□□ -0.39
SLC6A8-201ENST00000253122 NPIPB6E9PJ23 425 aa12.61□□□□□ -0.39
SLC6A8-201ENST00000253122 CR1LQ2VPA4 569 aa12.61□□□□□ -0.39
SLC6A8-201ENST00000253122 ARPC1AQ92747 370 aa12.61□□□□□ -0.39
SLC6A8-201ENST00000253122 NXT2Q9NPJ8 142 aaKnown RBP12.61□□□□□ -0.39
SLC6A8-201ENST00000253122 TMEM8BA6NDV4 472 aa12.6□□□□□ -0.39
SLC6A8-201ENST00000253122 FABP5P3A8MUU1 101 aa12.6□□□□□ -0.39
SLC6A8-201ENST00000253122 VGLL1Q99990 258 aa12.6□□□□□ -0.39
SLC6A8-201ENST00000253122 VKORC1Q9BQB6 163 aa12.6□□□□□ -0.39
SLC6A8-201ENST00000253122 PSMB11A5LHX3 300 aa12.6□□□□□ -0.39
SLC6A8-201ENST00000253122 GAGE12HA6NDE8 117 aa12.6□□□□□ -0.39
SLC6A8-201ENST00000253122 BOD1L2Q8IYS8 172 aa12.6□□□□□ -0.39
SLC6A8-201ENST00000253122 SHANK2-AS3Q9BTD1 123 aa12.6□□□□□ -0.39
SLC6A8-201ENST00000253122 WFDC2Q14508 124 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms