RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 PPIAL4GP0DN37 164 aa9.49□□□□□ -0.89
USHBP1-201ENST00000252597 NEU4Q8WWR8 484 aaPredicted RBP9.49□□□□□ -0.89
USHBP1-201ENST00000252597 ZNF414Q96IQ9 312 aa9.49□□□□□ -0.89
USHBP1-201ENST00000252597 HIF1ANQ9NWT6 349 aa9.49□□□□□ -0.89
USHBP1-201ENST00000252597 PEF1Q9UBV8 284 aaKnown RBP9.49□□□□□ -0.89
USHBP1-201ENST00000252597 Q9UFV3 132 aa9.49□□□□□ -0.89
USHBP1-201ENST00000252597 IGHV1-3A0A0C4DH29 117 aa9.49□□□□□ -0.89
USHBP1-201ENST00000252597 K7ERU9 68 aa9.49□□□□□ -0.89
USHBP1-201ENST00000252597 LGALS7P47929 136 aa9.49□□□□□ -0.89
USHBP1-201ENST00000252597 RNASE6Q93091 150 aaKnown RBP9.49□□□□□ -0.89
USHBP1-201ENST00000252597 OTORQ9NRC9 128 aa9.49□□□□□ -0.89
USHBP1-201ENST00000252597 CCDC168Q8NDH2 2452 aa9.49□□□□□ -0.89
USHBP1-201ENST00000252597 ZNF785A8K8V0 405 aa9.49□□□□□ -0.89
USHBP1-201ENST00000252597 RHOGP84095 191 aa9.49□□□□□ -0.89
USHBP1-201ENST00000252597 HIST1H1AQ02539 215 aaPredicted RBP9.49□□□□□ -0.89
USHBP1-201ENST00000252597 MEF2CQ06413 473 aaPredicted RBP9.49□□□□□ -0.89
USHBP1-201ENST00000252597 PET117Q6UWS5 81 aa9.49□□□□□ -0.89
USHBP1-201ENST00000252597 RNF125Q96EQ8 232 aa9.49□□□□□ -0.89
USHBP1-201ENST00000252597 DKK2Q9UBU2 259 aa9.49□□□□□ -0.89
USHBP1-201ENST00000252597 IGLC1P0CG04 106 aa9.48□□□□□ -0.89
USHBP1-201ENST00000252597 GATA1P15976 413 aaPredicted RBP9.48□□□□□ -0.89
USHBP1-201ENST00000252597 GATA4P43694 442 aa9.48□□□□□ -0.89
USHBP1-201ENST00000252597 ATP5IP56385 69 aaPredicted RBP9.48□□□□□ -0.89
USHBP1-201ENST00000252597 SMIM15Q7Z3B0 74 aa9.48□□□□□ -0.89
USHBP1-201ENST00000252597 A1L4Q6 167 aa9.48□□□□□ -0.89
USHBP1-201ENST00000252597 K7ERJ3 54 aa9.48□□□□□ -0.89
USHBP1-201ENST00000252597 TRGV9Q99603 122 aa9.48□□□□□ -0.89
USHBP1-201ENST00000252597 ZNF747Q9BV97 191 aa9.48□□□□□ -0.89
USHBP1-201ENST00000252597 MLST8Q9BVC4 326 aa9.48□□□□□ -0.89
USHBP1-201ENST00000252597 C1RLQ9NZP8 487 aa9.48□□□□□ -0.89
USHBP1-201ENST00000252597 RAI1Q7Z5J4 1906 aaPredicted RBP9.48□□□□□ -0.89
USHBP1-201ENST00000252597 DEFB125Q8N687 156 aa9.48□□□□□ -0.89
USHBP1-201ENST00000252597 C7orf69Q9H7B7 122 aa9.48□□□□□ -0.89
USHBP1-201ENST00000252597 TMEM160Q9NX00 188 aa9.48□□□□□ -0.89
USHBP1-201ENST00000252597 SIGLEC8Q9NYZ4 499 aa9.48□□□□□ -0.89
USHBP1-201ENST00000252597 KIR3DS1Q14943 382 aa9.47□□□□□ -0.89
USHBP1-201ENST00000252597 ECSCRQ19T08 205 aa9.47□□□□□ -0.89
USHBP1-201ENST00000252597 THAP8Q8NA92 274 aa9.47□□□□□ -0.89
USHBP1-201ENST00000252597 SCRT2Q9NQ03 307 aa9.47□□□□□ -0.89
USHBP1-201ENST00000252597 MYO9AB2RTY4 2548 aa9.47□□□□□ -0.89
USHBP1-201ENST00000252597 IGKV1-17P01599 117 aa9.47□□□□□ -0.89
USHBP1-201ENST00000252597 ERCC8Q13216 396 aa9.47□□□□□ -0.89
USHBP1-201ENST00000252597 GTSCR1Q86UQ5 136 aa9.47□□□□□ -0.89
USHBP1-201ENST00000252597 SONP18583 2426 aaKnown RBP9.47□□□□□ -0.89
USHBP1-201ENST00000252597 C19orf71A6NCJ1 209 aa9.46□□□□□ -0.89
USHBP1-201ENST00000252597 ORMDL3Q8N138 153 aa9.46□□□□□ -0.89
USHBP1-201ENST00000252597 ABHD17AQ96GS6 310 aa9.46□□□□□ -0.89
USHBP1-201ENST00000252597 HIVEP3Q5T1R4 2406 aa9.46□□□□□ -0.89
USHBP1-201ENST00000252597 SH2D1AO60880 128 aa9.46□□□□□ -0.9
USHBP1-201ENST00000252597 GAS8-AS1O95177 125 aa9.46□□□□□ -0.9
USHBP1-201ENST00000252597 NPYP01303 97 aa9.46□□□□□ -0.9
USHBP1-201ENST00000252597 SPCS1Q9Y6A9 102 aa9.46□□□□□ -0.9
USHBP1-201ENST00000252597 C2CD3Q4AC94 2353 aa9.46□□□□□ -0.9
USHBP1-201ENST00000252597 CDKN1BP46527 198 aa9.46□□□□□ -0.9
USHBP1-201ENST00000252597 CRIP1P50238 77 aa9.46□□□□□ -0.9
USHBP1-201ENST00000252597 IFI27L1Q96BM0 104 aa9.46□□□□□ -0.9
USHBP1-201ENST00000252597 TRBV19A0A075B6N1 114 aa9.45□□□□□ -0.9
USHBP1-201ENST00000252597 TEX36Q5VZQ5 186 aa9.45□□□□□ -0.9
USHBP1-201ENST00000252597 GTF2H5Q6ZYL4 71 aa9.45□□□□□ -0.9
USHBP1-201ENST00000252597 RNF182Q8N6D2 247 aa9.45□□□□□ -0.9
USHBP1-201ENST00000252597 PRSS22Q9GZN4 317 aa9.45□□□□□ -0.9
USHBP1-201ENST00000252597 A0A0G2JLM5 398 aa9.45□□□□□ -0.9
USHBP1-201ENST00000252597 A6NDN8 102 aa9.45□□□□□ -0.9
USHBP1-201ENST00000252597 E7EQL1 145 aa9.45□□□□□ -0.9
USHBP1-201ENST00000252597 FSTL3O95633 263 aa9.45□□□□□ -0.9
USHBP1-201ENST00000252597 MYCNOSP40205 109 aa9.45□□□□□ -0.9
USHBP1-201ENST00000252597 LEPP41159 167 aa9.45□□□□□ -0.9
USHBP1-201ENST00000252597 PLP1P60201 277 aa9.45□□□□□ -0.9
USHBP1-201ENST00000252597 RPL11P62913 178 aaKnown RBP9.45□□□□□ -0.9
USHBP1-201ENST00000252597 FOXC2Q99958 501 aa9.45□□□□□ -0.9
USHBP1-201ENST00000252597 NDFIP1Q9BT67 221 aa9.45□□□□□ -0.9
USHBP1-201ENST00000252597 NHP2Q9NX24 153 aaKnown RBP9.45□□□□□ -0.9
USHBP1-201ENST00000252597 LINC00527Q9UJ94 153 aa9.45□□□□□ -0.9
USHBP1-201ENST00000252597 USP9XQ93008 2570 aaPredicted RBP9.45□□□□□ -0.9
USHBP1-201ENST00000252597 LRRK2Q5S007 2527 aa9.45□□□□□ -0.9
USHBP1-201ENST00000252597 CD5LO43866 347 aa9.44□□□□□ -0.9
USHBP1-201ENST00000252597 COX8AP10176 69 aa9.44□□□□□ -0.9
USHBP1-201ENST00000252597 PSG3Q16557 428 aa9.44□□□□□ -0.9
USHBP1-201ENST00000252597 TMEM155Q4W5P6 130 aa9.44□□□□□ -0.9
USHBP1-201ENST00000252597 OR2K2Q8NGT1 345 aa9.44□□□□□ -0.9
USHBP1-201ENST00000252597 VGLL1Q99990 258 aa9.44□□□□□ -0.9
USHBP1-201ENST00000252597 KLF12Q9Y4X4 402 aa9.44□□□□□ -0.9
USHBP1-201ENST00000252597 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.44□□□□□ -0.9
USHBP1-201ENST00000252597 BUB1B-PAK6H3BSN5 160 aa9.44□□□□□ -0.9
USHBP1-201ENST00000252597 MRPL51Q4U2R6 128 aaKnown RBP9.44□□□□□ -0.9
USHBP1-201ENST00000252597 CLEC2AQ6UVW9 174 aa9.44□□□□□ -0.9
USHBP1-201ENST00000252597 OR4A5Q8NH83 315 aa9.44□□□□□ -0.9
USHBP1-201ENST00000252597 ABCA12Q86UK0 2595 aa9.44□□□□□ -0.9
USHBP1-201ENST00000252597 CRYBG3Q68DQ2 2970 aa9.44□□□□□ -0.9
USHBP1-201ENST00000252597 TRAV26-2A0A0B4J265 109 aa9.44□□□□□ -0.9
USHBP1-201ENST00000252597 SCGB2A2Q13296 93 aa9.44□□□□□ -0.9
USHBP1-201ENST00000252597 FER1L6-AS1Q8NA97 138 aa9.44□□□□□ -0.9
USHBP1-201ENST00000252597 THBDP07204 575 aa9.43□□□□□ -0.9
USHBP1-201ENST00000252597 HAX1O00165 279 aa9.43□□□□□ -0.9
USHBP1-201ENST00000252597 GRNP28799 593 aaKnown RBP9.43□□□□□ -0.9
USHBP1-201ENST00000252597 S100A7AQ86SG5 101 aa9.43□□□□□ -0.9
USHBP1-201ENST00000252597 FAM57AQ8TBR7 257 aa9.43□□□□□ -0.9
USHBP1-201ENST00000252597 SOX21Q9Y651 276 aaPredicted RBP9.43□□□□□ -0.9
USHBP1-201ENST00000252597 IGHV3OR16-10A0A075B7F0 116 aa9.43□□□□□ -0.9
USHBP1-201ENST00000252597 IGLV2-11P01706 119 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms