RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 RITA1Q96K30 269 aa9.31□□□□□ -0.92
SOX9-201ENST00000245479 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.3□□□□□ -0.92
SOX9-201ENST00000245479 A0A1B0GW15 77 aa9.3□□□□□ -0.92
SOX9-201ENST00000245479 IGLC1P0CG04 106 aa9.3□□□□□ -0.92
SOX9-201ENST00000245479 HERVK_113P61574 105 aa9.3□□□□□ -0.92
SOX9-201ENST00000245479 KLRD1Q13241 179 aa9.3□□□□□ -0.92
SOX9-201ENST00000245479 Q6AWC8 147 aa9.3□□□□□ -0.92
SOX9-201ENST00000245479 DEFB104AQ8WTQ1 72 aa9.3□□□□□ -0.92
SOX9-201ENST00000245479 A0A1W2PPM0 123 aa9.3□□□□□ -0.92
SOX9-201ENST00000245479 C17orf100A8MU93 164 aa9.3□□□□□ -0.92
SOX9-201ENST00000245479 NDUFA3O95167 84 aa9.3□□□□□ -0.92
SOX9-201ENST00000245479 CD3EP07766 207 aa9.3□□□□□ -0.92
SOX9-201ENST00000245479 ARMS2P0C7Q2 107 aa9.3□□□□□ -0.92
SOX9-201ENST00000245479 MORN5Q5VZ52 161 aa9.3□□□□□ -0.92
SOX9-201ENST00000245479 TMEM200BQ69YZ2 307 aa9.3□□□□□ -0.92
SOX9-201ENST00000245479 WFDC12Q8WWY7 111 aa9.3□□□□□ -0.92
SOX9-201ENST00000245479 ATP6V0BQ99437 205 aa9.3□□□□□ -0.92
SOX9-201ENST00000245479 ACANP16112 2415 aa9.3□□□□□ -0.92
SOX9-201ENST00000245479 TEX48A0A1B0GUV7 120 aa9.3□□□□□ -0.92
SOX9-201ENST00000245479 C15orf65H3BRN8 121 aa9.3□□□□□ -0.92
SOX9-201ENST00000245479 RAB9AP51151 201 aa9.3□□□□□ -0.92
SOX9-201ENST00000245479 NGBQ9NPG2 151 aa9.3□□□□□ -0.92
SOX9-201ENST00000245479 GAGE12HA6NDE8 117 aa9.29□□□□□ -0.92
SOX9-201ENST00000245479 FAM231DQ6ZW35 169 aa9.29□□□□□ -0.92
SOX9-201ENST00000245479 RAXQ9Y2V3 346 aa9.29□□□□□ -0.92
SOX9-201ENST00000245479 JMJD1CQ15652 2540 aa9.29□□□□□ -0.92
SOX9-201ENST00000245479 M0R3E3 92 aa9.29□□□□□ -0.92
SOX9-201ENST00000245479 SMIM17P0DL12 118 aa9.29□□□□□ -0.92
SOX9-201ENST00000245479 MC5RP33032 325 aa9.29□□□□□ -0.92
SOX9-201ENST00000245479 CYSLTR1Q9Y271 337 aa9.29□□□□□ -0.92
SOX9-201ENST00000245479 HIVEP2P31629 2446 aa9.29□□□□□ -0.92
SOX9-201ENST00000245479 PRR20EP86478 221 aa9.29□□□□□ -0.92
SOX9-201ENST00000245479 PRR20CP86479 221 aa9.29□□□□□ -0.92
SOX9-201ENST00000245479 PRR20DP86480 221 aa9.29□□□□□ -0.92
SOX9-201ENST00000245479 PRR20BP86481 221 aa9.29□□□□□ -0.92
SOX9-201ENST00000245479 PRR20AP86496 221 aa9.29□□□□□ -0.92
SOX9-201ENST00000245479 ADIPOQQ15848 244 aa9.29□□□□□ -0.92
SOX9-201ENST00000245479 C17orf58Q2M2W7 97 aa9.29□□□□□ -0.92
SOX9-201ENST00000245479 OTORQ9NRC9 128 aa9.29□□□□□ -0.92
SOX9-201ENST00000245479 PSG8Q9UQ74 426 aa9.29□□□□□ -0.92
SOX9-201ENST00000245479 F5H697 171 aa9.28□□□□□ -0.92
SOX9-201ENST00000245479 IGHG3P01860 377 aa9.28□□□□□ -0.92
SOX9-201ENST00000245479 MGPP08493 103 aa9.28□□□□□ -0.92
SOX9-201ENST00000245479 ZC2HC1BQ5TFG8 222 aa9.28□□□□□ -0.92
SOX9-201ENST00000245479 GAFA1Q96PS6 74 aa9.28□□□□□ -0.92
SOX9-201ENST00000245479 GEMIN7Q9H840 131 aaKnown RBP9.28□□□□□ -0.92
SOX9-201ENST00000245479 DPM2O94777 84 aa9.28□□□□□ -0.92
SOX9-201ENST00000245479 PSMG4Q5JS54 123 aa9.28□□□□□ -0.92
SOX9-201ENST00000245479 PKD1L2Q7Z442 2459 aa9.28□□□□□ -0.92
SOX9-201ENST00000245479 NDUFS7O75251 213 aa9.28□□□□□ -0.92
SOX9-201ENST00000245479 ATP5LO75964 103 aa9.28□□□□□ -0.92
SOX9-201ENST00000245479 IGKCP01834 107 aa9.28□□□□□ -0.92
SOX9-201ENST00000245479 SPINK8P0C7L1 97 aa9.28□□□□□ -0.92
SOX9-201ENST00000245479 EVI2AP22794 236 aa9.28□□□□□ -0.92
SOX9-201ENST00000245479 LINC00310P59036 64 aa9.28□□□□□ -0.92
SOX9-201ENST00000245479 CD300EQ496F6 205 aaPredicted RBP9.28□□□□□ -0.92
SOX9-201ENST00000245479 AMN1Q8IY45 258 aa9.28□□□□□ -0.92
SOX9-201ENST00000245479 KMT2EQ8IZD2 1858 aa9.28□□□□□ -0.92
SOX9-201ENST00000245479 PCSK5Q92824 1860 aa9.28□□□□□ -0.92
SOX9-201ENST00000245479 SNCGO76070 127 aa9.27□□□□□ -0.92
SOX9-201ENST00000245479 RNASE2P10153 161 aaKnown RBP9.27□□□□□ -0.92
SOX9-201ENST00000245479 LOXL3P58215 753 aa9.27□□□□□ -0.92
SOX9-201ENST00000245479 KLF5Q13887 457 aaPredicted RBP9.27□□□□□ -0.92
SOX9-201ENST00000245479 CHAC1Q9BUX1 264 aa9.27□□□□□ -0.92
SOX9-201ENST00000245479 C2orf70A6NJV1 201 aa9.27□□□□□ -0.93
SOX9-201ENST00000245479 SMKR1H3BMG3 65 aa9.27□□□□□ -0.93
SOX9-201ENST00000245479 CFHR2P36980 270 aa9.27□□□□□ -0.93
SOX9-201ENST00000245479 ECSCRQ19T08 205 aa9.27□□□□□ -0.93
SOX9-201ENST00000245479 LCNL1Q6ZST4 164 aa9.27□□□□□ -0.93
SOX9-201ENST00000245479 TEX29Q8N6K0 151 aa9.27□□□□□ -0.93
SOX9-201ENST00000245479 UBTD1Q9HAC8 227 aa9.27□□□□□ -0.93
SOX9-201ENST00000245479 LYZL1Q6UWQ5 148 aa9.26□□□□□ -0.93
SOX9-201ENST00000245479 FAM57AQ8TBR7 257 aa9.26□□□□□ -0.93
SOX9-201ENST00000245479 WIPF2Q8TF74 440 aaPredicted RBP9.26□□□□□ -0.93
SOX9-201ENST00000245479 K7ERJ3 54 aa9.26□□□□□ -0.93
SOX9-201ENST00000245479 PPIFP30405 207 aaKnown RBP9.26□□□□□ -0.93
SOX9-201ENST00000245479 RHOGP84095 191 aa9.26□□□□□ -0.93
SOX9-201ENST00000245479 AMTNQ6UX39 209 aa9.26□□□□□ -0.93
SOX9-201ENST00000245479 ASCL5Q7RTU5 278 aa9.26□□□□□ -0.93
SOX9-201ENST00000245479 SCRT2Q9NQ03 307 aa9.26□□□□□ -0.93
SOX9-201ENST00000245479 TMEM14BQ9NUH8 114 aa9.26□□□□□ -0.93
SOX9-201ENST00000245479 DSCAML1Q8TD84 2053 aa9.26□□□□□ -0.93
SOX9-201ENST00000245479 PSMB11A5LHX3 300 aa9.25□□□□□ -0.93
SOX9-201ENST00000245479 H3BMG7 143 aa9.25□□□□□ -0.93
SOX9-201ENST00000245479 RNASE6Q93091 150 aaKnown RBP9.25□□□□□ -0.93
SOX9-201ENST00000245479 VKORC1Q9BQB6 163 aa9.25□□□□□ -0.93
SOX9-201ENST00000245479 RPUSD1Q9UJJ7 312 aaKnown RBP9.25□□□□□ -0.93
SOX9-201ENST00000245479 FNDC10F2Z333 226 aa9.25□□□□□ -0.93
SOX9-201ENST00000245479 HOXA3O43365 443 aaPredicted RBP9.25□□□□□ -0.93
SOX9-201ENST00000245479 SLC25A2Q9BXI2 301 aa9.25□□□□□ -0.93
SOX9-201ENST00000245479 BEX4Q9NWD9 120 aaPredicted RBP9.25□□□□□ -0.93
SOX9-201ENST00000245479 IGKV1OR2-108A0A075B7D4 117 aa9.25□□□□□ -0.93
SOX9-201ENST00000245479 TRAV8-2A0A0B4J237 113 aa9.25□□□□□ -0.93
SOX9-201ENST00000245479 ARPC1AQ92747 370 aa9.25□□□□□ -0.93
SOX9-201ENST00000245479 ZNF747Q9BV97 191 aa9.25□□□□□ -0.93
SOX9-201ENST00000245479 CHTOPQ9Y3Y2 248 aaKnown RBP9.25□□□□□ -0.93
SOX9-201ENST00000245479 G3V4G9 280 aa9.24□□□□□ -0.93
SOX9-201ENST00000245479 LGALS7P47929 136 aa9.24□□□□□ -0.93
SOX9-201ENST00000245479 TMPRSS3P57727 454 aa9.24□□□□□ -0.93
SOX9-201ENST00000245479 PCP2Q8IVA1 136 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms