RNA–Protein interactions for RNA: ENST00000642141.1

SCN1A-222, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

Gene SCN1A, Length 921 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-222ENST00000642141 MORN5Q5VZ52 161 aa7.33□□□□□ -1.24
SCN1A-222ENST00000642141 TEPPQ6URK8 271 aa7.33□□□□□ -1.24
SCN1A-222ENST00000642141 Q6ZNX1 250 aa7.33□□□□□ -1.24
SCN1A-222ENST00000642141 IGF2BP2-AS1Q96M15 143 aa7.33□□□□□ -1.24
SCN1A-222ENST00000642141 ARV1Q9H2C2 271 aa7.33□□□□□ -1.24
SCN1A-222ENST00000642141 PPP1R14DQ9NXH3 145 aa7.33□□□□□ -1.24
SCN1A-222ENST00000642141 FAM24AA6NFZ4 105 aa7.32□□□□□ -1.24
SCN1A-222ENST00000642141 K7EPK0 472 aa7.32□□□□□ -1.24
SCN1A-222ENST00000642141 CRXO43186 299 aaPredicted RBP7.32□□□□□ -1.24
SCN1A-222ENST00000642141 COX7A2P2O60397 106 aa7.32□□□□□ -1.24
SCN1A-222ENST00000642141 TSC22D2O75157 780 aa7.32□□□□□ -1.24
SCN1A-222ENST00000642141 DUSP14O95147 198 aaKnown RBP7.32□□□□□ -1.24
SCN1A-222ENST00000642141 AMBPP02760 352 aa7.32□□□□□ -1.24
SCN1A-222ENST00000642141 CXCL3P19876 107 aa7.32□□□□□ -1.24
SCN1A-222ENST00000642141 AZU1P20160 251 aa7.32□□□□□ -1.24
SCN1A-222ENST00000642141 CAV2P51636 162 aa7.32□□□□□ -1.24
SCN1A-222ENST00000642141 TAS2R30P59541 319 aa7.32□□□□□ -1.24
SCN1A-222ENST00000642141 LINC00305Q7Z4B0 112 aa7.32□□□□□ -1.24
SCN1A-222ENST00000642141 MGST2Q99735 147 aa7.32□□□□□ -1.24
SCN1A-222ENST00000642141 IGLV2-18A0A075B6J9 118 aa7.31□□□□□ -1.24
SCN1A-222ENST00000642141 TRAV5A0A0B4J249 113 aa7.31□□□□□ -1.24
SCN1A-222ENST00000642141 INSP01308 110 aa7.31□□□□□ -1.24
SCN1A-222ENST00000642141 H2AFB2P0C5Z0 115 aa7.31□□□□□ -1.24
SCN1A-222ENST00000642141 DEFB130BP0DP73 79 aa7.31□□□□□ -1.24
SCN1A-222ENST00000642141 DEFB130AP0DP74 79 aa7.31□□□□□ -1.24
SCN1A-222ENST00000642141 PLP1P60201 277 aa7.31□□□□□ -1.24
SCN1A-222ENST00000642141 S100A10P60903 97 aa7.31□□□□□ -1.24
SCN1A-222ENST00000642141 DAD1P61803 113 aa7.31□□□□□ -1.24
SCN1A-222ENST00000642141 PSG3Q16557 428 aa7.31□□□□□ -1.24
SCN1A-222ENST00000642141 ZNF546Q86UE3 836 aa7.31□□□□□ -1.24
SCN1A-222ENST00000642141 UBE2DNLQ8IWF7 75 aa7.31□□□□□ -1.24
SCN1A-222ENST00000642141 C12orf45Q8N5I9 185 aaPredicted RBP7.31□□□□□ -1.24
SCN1A-222ENST00000642141 POM121L12Q8N7R1 296 aa7.31□□□□□ -1.24
SCN1A-222ENST00000642141 OR8A1Q8NGG7 326 aa7.31□□□□□ -1.24
SCN1A-222ENST00000642141 ZNF431Q8TF32 576 aaPredicted RBP7.31□□□□□ -1.24
SCN1A-222ENST00000642141 RPUSD4Q96CM3 377 aaKnown RBP7.31□□□□□ -1.24
SCN1A-222ENST00000642141 LINC01587Q99440 93 aa7.31□□□□□ -1.24
SCN1A-222ENST00000642141 HECTD4Q9Y4D8 3996 aa7.3□□□□□ -1.24
SCN1A-222ENST00000642141 A8MTW9 85 aa7.3□□□□□ -1.24
SCN1A-222ENST00000642141 PRAC2D3DTV9 90 aa7.3□□□□□ -1.24
SCN1A-222ENST00000642141 BOLA2-SMG1P6H3BVE0 249 aa7.3□□□□□ -1.24
SCN1A-222ENST00000642141 J3KRW8 73 aa7.3□□□□□ -1.24
SCN1A-222ENST00000642141 P0DMU3 169 aa7.3□□□□□ -1.24
SCN1A-222ENST00000642141 FAM231AP0DMU4 169 aa7.3□□□□□ -1.24
SCN1A-222ENST00000642141 FAM231CP0DMU5 169 aa7.3□□□□□ -1.24
SCN1A-222ENST00000642141 CAMLGP49069 296 aa7.3□□□□□ -1.24
SCN1A-222ENST00000642141 KIR3DS1Q14943 382 aa7.3□□□□□ -1.24
SCN1A-222ENST00000642141 C10orf113Q5VZT2 155 aa7.3□□□□□ -1.24
SCN1A-222ENST00000642141 MIC13Q5XKP0 118 aa7.3□□□□□ -1.24
SCN1A-222ENST00000642141 TMEM88Q6PEY1 159 aa7.3□□□□□ -1.24
SCN1A-222ENST00000642141 NRARPQ7Z6K4 114 aa7.3□□□□□ -1.24
SCN1A-222ENST00000642141 TMEM37Q8WXS4 190 aa7.3□□□□□ -1.24
SCN1A-222ENST00000642141 C2orf50Q96LR7 162 aa7.3□□□□□ -1.24
SCN1A-222ENST00000642141 PARD6GQ9BYG4 376 aaPredicted RBP7.3□□□□□ -1.24
SCN1A-222ENST00000642141 A0A087X0K7 114 aa7.29□□□□□ -1.24
SCN1A-222ENST00000642141 UBE2L5PA0A1B0GUS4 154 aa7.29□□□□□ -1.24
SCN1A-222ENST00000642141 FAM240BA0A1B0GVZ2 78 aa7.29□□□□□ -1.24
SCN1A-222ENST00000642141 IGSF23A1L1A6 192 aa7.29□□□□□ -1.24
SCN1A-222ENST00000642141 FNDC10F2Z333 226 aa7.29□□□□□ -1.24
SCN1A-222ENST00000642141 H3BQ15 152 aa7.29□□□□□ -1.24
SCN1A-222ENST00000642141 SLC17A3O00476 420 aa7.29□□□□□ -1.24
SCN1A-222ENST00000642141 MRPS12O15235 138 aaKnown RBP7.29□□□□□ -1.24
SCN1A-222ENST00000642141 OPCMLQ14982 345 aa7.29□□□□□ -1.24
SCN1A-222ENST00000642141 RGS21Q2M5E4 152 aa7.29□□□□□ -1.24
SCN1A-222ENST00000642141 S100A7AQ86SG5 101 aa7.29□□□□□ -1.24
SCN1A-222ENST00000642141 GGACTQ9BVM4 153 aa7.29□□□□□ -1.24
SCN1A-222ENST00000642141 DNAJC4Q9NNZ3 241 aa7.29□□□□□ -1.24
SCN1A-222ENST00000642141 SIX6O95475 246 aa7.28□□□□□ -1.24
SCN1A-222ENST00000642141 BAXQ07812 192 aa7.28□□□□□ -1.24
SCN1A-222ENST00000642141 RAB31Q13636 194 aa7.28□□□□□ -1.24
SCN1A-222ENST00000642141 RAB32Q13637 225 aa7.28□□□□□ -1.24
SCN1A-222ENST00000642141 BPIFA4PQ86YQ2 179 aa7.28□□□□□ -1.24
SCN1A-222ENST00000642141 C11orf1Q9H5F2 150 aa7.28□□□□□ -1.24
SCN1A-222ENST00000642141 ZNF331Q9NQX6 463 aaPredicted RBP7.28□□□□□ -1.24
SCN1A-222ENST00000642141 UQCC1Q9NVA1 299 aa7.28□□□□□ -1.24
SCN1A-222ENST00000642141 TEX48A0A1B0GUV7 120 aa7.27□□□□□ -1.25
SCN1A-222ENST00000642141 F5H768 121 aa7.27□□□□□ -1.25
SCN1A-222ENST00000642141 PVALBP20472 110 aaPredicted RBP7.27□□□□□ -1.25
SCN1A-222ENST00000642141 PXDC1Q5TGL8 231 aa7.27□□□□□ -1.25
SCN1A-222ENST00000642141 MZT2BQ6NZ67 158 aa7.27□□□□□ -1.25
SCN1A-222ENST00000642141 LCN15Q6UWW0 184 aa7.27□□□□□ -1.25
SCN1A-222ENST00000642141 Q6ZRG5 221 aa7.27□□□□□ -1.25
SCN1A-222ENST00000642141 OR10J6PQ8NGY7 276 aa7.27□□□□□ -1.25
SCN1A-222ENST00000642141 CCDC32Q9BV29 185 aa7.27□□□□□ -1.25
SCN1A-222ENST00000642141 SLC39A9Q9NUM3 307 aa7.27□□□□□ -1.25
SCN1A-222ENST00000642141 WDR83OSQ9Y284 106 aa7.27□□□□□ -1.25
SCN1A-222ENST00000642141 A0A1B0GVG6 124 aa7.26□□□□□ -1.25
SCN1A-222ENST00000642141 PLAC8L1A1L4L8 177 aa7.26□□□□□ -1.25
SCN1A-222ENST00000642141 NUDT3O95989 172 aa7.26□□□□□ -1.25
SCN1A-222ENST00000642141 IGLC2P0DOY2 106 aa7.26□□□□□ -1.25
SCN1A-222ENST00000642141 FGF7P21781 194 aa7.26□□□□□ -1.25
SCN1A-222ENST00000642141 SULT1A1P50225 295 aa7.26□□□□□ -1.25
SCN1A-222ENST00000642141 OXA1LQ15070 435 aa7.26□□□□□ -1.25
SCN1A-222ENST00000642141 LRRC37A5PQ49AS3 106 aa7.26□□□□□ -1.25
SCN1A-222ENST00000642141 GCSAMLQ5JQS6 135 aa7.26□□□□□ -1.25
SCN1A-222ENST00000642141 DMRTA1Q5VZB9 504 aa7.26□□□□□ -1.25
SCN1A-222ENST00000642141 TMEM252Q8N6L7 170 aa7.26□□□□□ -1.25
SCN1A-222ENST00000642141 GPN1Q9HCN4 374 aaPredicted RBP7.26□□□□□ -1.25
SCN1A-222ENST00000642141 NOP10Q9NPE3 64 aaKnown RBP7.26□□□□□ -1.25
SCN1A-222ENST00000642141 ZNF586Q9NXT0 402 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms