RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 H3BTX0 84 aa11.73□□□□□ -0.53
PHGDH-213ENST00000641272 NDUFB6O95139 128 aa11.73□□□□□ -0.53
PHGDH-213ENST00000641272 OR4E1P0C645 316 aa11.73□□□□□ -0.53
PHGDH-213ENST00000641272 ANXA7P20073 488 aaKnown RBP11.73□□□□□ -0.53
PHGDH-213ENST00000641272 BAK1Q16611 211 aa11.73□□□□□ -0.53
PHGDH-213ENST00000641272 PATE2Q6UY27 113 aa11.73□□□□□ -0.53
PHGDH-213ENST00000641272 DEDD2Q8WXF8 326 aa11.73□□□□□ -0.53
PHGDH-213ENST00000641272 RPUSD4Q96CM3 377 aaKnown RBP11.73□□□□□ -0.53
PHGDH-213ENST00000641272 ARV1Q9H2C2 271 aa11.73□□□□□ -0.53
PHGDH-213ENST00000641272 MGAT4CQ9UBM8 478 aa11.73□□□□□ -0.53
PHGDH-213ENST00000641272 ATP5G1P05496 136 aa11.72□□□□□ -0.53
PHGDH-213ENST00000641272 TSPOP30536 169 aa11.72□□□□□ -0.53
PHGDH-213ENST00000641272 ATP5G3P48201 142 aa11.72□□□□□ -0.53
PHGDH-213ENST00000641272 PLP1P60201 277 aa11.72□□□□□ -0.53
PHGDH-213ENST00000641272 SELENOTP62341 195 aa11.72□□□□□ -0.53
PHGDH-213ENST00000641272 TNP2Q05952 138 aa11.72□□□□□ -0.53
PHGDH-213ENST00000641272 KIR3DS1Q14943 382 aa11.72□□□□□ -0.53
PHGDH-213ENST00000641272 IAH1Q2TAA2 248 aaPredicted RBP11.72□□□□□ -0.53
PHGDH-213ENST00000641272 C4orf46Q504U0 113 aa11.72□□□□□ -0.53
PHGDH-213ENST00000641272 SPANXN2Q5MJ10 180 aa11.72□□□□□ -0.53
PHGDH-213ENST00000641272 TMEM14EPQ6UXP3 125 aa11.72□□□□□ -0.53
PHGDH-213ENST00000641272 SMIM8Q96KF7 97 aa11.72□□□□□ -0.53
PHGDH-213ENST00000641272 RCL1Q9Y2P8 373 aaKnown RBP11.72□□□□□ -0.53
PHGDH-213ENST00000641272 CCSO14618 274 aa11.71□□□□□ -0.53
PHGDH-213ENST00000641272 MRPS12O15235 138 aaKnown RBP11.71□□□□□ -0.53
PHGDH-213ENST00000641272 ARL16Q0P5N6 197 aa11.71□□□□□ -0.53
PHGDH-213ENST00000641272 RNF141Q8WVD5 230 aa11.71□□□□□ -0.53
PHGDH-213ENST00000641272 C16orf74Q96GX8 76 aa11.71□□□□□ -0.53
PHGDH-213ENST00000641272 HSPG2P98160 4391 aa11.7□□□□□ -0.54
PHGDH-213ENST00000641272 J3KRW8 73 aa11.7□□□□□ -0.54
PHGDH-213ENST00000641272 SLC17A3O00476 420 aa11.7□□□□□ -0.54
PHGDH-213ENST00000641272 BTCP35070 178 aa11.7□□□□□ -0.54
PHGDH-213ENST00000641272 TAS2R60P59551 318 aa11.7□□□□□ -0.54
PHGDH-213ENST00000641272 B2MP61769 119 aa11.7□□□□□ -0.54
PHGDH-213ENST00000641272 MORN5Q5VZ52 161 aa11.7□□□□□ -0.54
PHGDH-213ENST00000641272 TEPPQ6URK8 271 aa11.7□□□□□ -0.54
PHGDH-213ENST00000641272 TMEM256Q8N2U0 113 aa11.7□□□□□ -0.54
PHGDH-213ENST00000641272 ZBTB8BQ8NAP8 495 aaPredicted RBP11.7□□□□□ -0.54
PHGDH-213ENST00000641272 OR10P1Q8NGE3 313 aa11.7□□□□□ -0.54
PHGDH-213ENST00000641272 ZNRF2Q8NHG8 242 aa11.7□□□□□ -0.54
PHGDH-213ENST00000641272 RBM38Q9H0Z9 239 aaKnown RBP11.7□□□□□ -0.54
PHGDH-213ENST00000641272 NOP10Q9NPE3 64 aaKnown RBP11.7□□□□□ -0.54
PHGDH-213ENST00000641272 GSKIPQ9P0R6 139 aa11.7□□□□□ -0.54
PHGDH-213ENST00000641272 NBDYA0A0U1RRE5 68 aa11.69□□□□□ -0.54
PHGDH-213ENST00000641272 PRAC2D3DTV9 90 aa11.69□□□□□ -0.54
PHGDH-213ENST00000641272 GOSR2O14653 212 aa11.69□□□□□ -0.54
PHGDH-213ENST00000641272 CDKN1BP46527 198 aa11.69□□□□□ -0.54
PHGDH-213ENST00000641272 LCN15Q6UWW0 184 aa11.69□□□□□ -0.54
PHGDH-213ENST00000641272 LINC00305Q7Z4B0 112 aa11.69□□□□□ -0.54
PHGDH-213ENST00000641272 ZNF546Q86UE3 836 aa11.69□□□□□ -0.54
PHGDH-213ENST00000641272 KRTAP4-5Q9BYR2 181 aa11.69□□□□□ -0.54
PHGDH-213ENST00000641272 NPVFQ9HCQ7 196 aa11.69□□□□□ -0.54
PHGDH-213ENST00000641272 ZNF331Q9NQX6 463 aaPredicted RBP11.69□□□□□ -0.54
PHGDH-213ENST00000641272 LINC00588Q9Y4M8 146 aa11.69□□□□□ -0.54
PHGDH-213ENST00000641272 NAP1L6A6NFF2 107 aa11.68□□□□□ -0.54
PHGDH-213ENST00000641272 AGPAT2O15120 278 aa11.68□□□□□ -0.54
PHGDH-213ENST00000641272 COX7A2P2O60397 106 aa11.68□□□□□ -0.54
PHGDH-213ENST00000641272 TSC22D2O75157 780 aa11.68□□□□□ -0.54
PHGDH-213ENST00000641272 FAM3BP58499 235 aaPredicted RBP11.68□□□□□ -0.54
PHGDH-213ENST00000641272 RNASE8Q8TDE3 154 aaKnown RBP11.68□□□□□ -0.54
PHGDH-213ENST00000641272 MGST2Q99735 147 aa11.68□□□□□ -0.54
PHGDH-213ENST00000641272 TIMM8BQ9Y5J9 83 aaPredicted RBP11.68□□□□□ -0.54
PHGDH-213ENST00000641272 CBY3A6NI87 242 aa11.67□□□□□ -0.54
PHGDH-213ENST00000641272 C16orf90A8MZG2 172 aa11.67□□□□□ -0.54
PHGDH-213ENST00000641272 K7EPK0 472 aa11.67□□□□□ -0.54
PHGDH-213ENST00000641272 CLINT1Q14677 625 aa11.67□□□□□ -0.54
PHGDH-213ENST00000641272 OPCMLQ14982 345 aa11.67□□□□□ -0.54
PHGDH-213ENST00000641272 GFI1BQ5VTD9 330 aa11.67□□□□□ -0.54
PHGDH-213ENST00000641272 S100A7AQ86SG5 101 aa11.67□□□□□ -0.54
PHGDH-213ENST00000641272 C6orf223Q8N319 242 aa11.67□□□□□ -0.54
PHGDH-213ENST00000641272 TMEM263Q8WUH6 116 aaKnown RBP11.67□□□□□ -0.54
PHGDH-213ENST00000641272 SDHCQ99643 169 aaPredicted RBP11.67□□□□□ -0.54
PHGDH-213ENST00000641272 SLC50A1Q9BRV3 221 aa11.67□□□□□ -0.54
PHGDH-213ENST00000641272 LRP1BQ9NZR2 4599 aa11.67□□□□□ -0.54
PHGDH-213ENST00000641272 A0A0J9YY99 117 aa11.66□□□□□ -0.54
PHGDH-213ENST00000641272 C7orf66A4D0T2 115 aa11.66□□□□□ -0.54
PHGDH-213ENST00000641272 FNDC10F2Z333 226 aa11.66□□□□□ -0.54
PHGDH-213ENST00000641272 MBPP02686 304 aaPredicted RBP11.66□□□□□ -0.54
PHGDH-213ENST00000641272 CXCL2P19875 107 aa11.66□□□□□ -0.54
PHGDH-213ENST00000641272 CCL18P55774 89 aa11.66□□□□□ -0.54
PHGDH-213ENST00000641272 LSM5Q9Y4Y9 91 aaKnown RBP11.66□□□□□ -0.54
PHGDH-213ENST00000641272 H7BYZ3 331 aa11.65□□□□□ -0.54
PHGDH-213ENST00000641272 OR5I1Q13606 314 aa11.65□□□□□ -0.54
PHGDH-213ENST00000641272 C10orf113Q5VZT2 155 aa11.65□□□□□ -0.54
PHGDH-213ENST00000641272 SSX7Q7RTT5 188 aa11.65□□□□□ -0.54
PHGDH-213ENST00000641272 BPIFA4PQ86YQ2 179 aa11.65□□□□□ -0.54
PHGDH-213ENST00000641272 OR10J6PQ8NGY7 276 aa11.65□□□□□ -0.54
PHGDH-213ENST00000641272 TMEM37Q8WXS4 190 aa11.65□□□□□ -0.54
PHGDH-213ENST00000641272 C20orf85Q9H1P6 137 aa11.65□□□□□ -0.54
PHGDH-213ENST00000641272 TRAV26-1A0A087WT03 109 aa11.64□□□□□ -0.55
PHGDH-213ENST00000641272 TRAV5A0A0B4J249 113 aa11.64□□□□□ -0.55
PHGDH-213ENST00000641272 GAGE12BA1L429 117 aa11.64□□□□□ -0.55
PHGDH-213ENST00000641272 CENPXA8MT69 81 aa11.64□□□□□ -0.55
PHGDH-213ENST00000641272 FAM25EA8MYX2 175 aa11.64□□□□□ -0.55
PHGDH-213ENST00000641272 H3BQ15 152 aa11.64□□□□□ -0.55
PHGDH-213ENST00000641272 L7N2F9 121 aa11.64□□□□□ -0.55
PHGDH-213ENST00000641272 GAGE7O76087 117 aa11.64□□□□□ -0.55
PHGDH-213ENST00000641272 GAGE12FP0CL80 117 aa11.64□□□□□ -0.55
PHGDH-213ENST00000641272 GAGE12GP0CL81 117 aa11.64□□□□□ -0.55
PHGDH-213ENST00000641272 GAGE12IP0CL82 117 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms