RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 A0A087X0K7 114 aa12.67□□□□□ -0.38
PNKP-230ENST00000638016 DEFB131BA0A096LNP1 70 aa12.67□□□□□ -0.38
PNKP-230ENST00000638016 UBE2L5PA0A1B0GUS4 154 aa12.67□□□□□ -0.38
PNKP-230ENST00000638016 CRXO43186 299 aaPredicted RBP12.67□□□□□ -0.38
PNKP-230ENST00000638016 OPCMLQ14982 345 aa12.67□□□□□ -0.38
PNKP-230ENST00000638016 NRARPQ7Z6K4 114 aa12.67□□□□□ -0.38
PNKP-230ENST00000638016 TMEM252Q8N6L7 170 aa12.67□□□□□ -0.38
PNKP-230ENST00000638016 TRAV12-2A0A075B6T6 113 aa12.66□□□□□ -0.38
PNKP-230ENST00000638016 TRAV5A0A0B4J249 113 aa12.66□□□□□ -0.38
PNKP-230ENST00000638016 SLC17A3O00476 420 aa12.66□□□□□ -0.38
PNKP-230ENST00000638016 COX7A2P2O60397 106 aa12.66□□□□□ -0.38
PNKP-230ENST00000638016 S100A7P31151 101 aa12.66□□□□□ -0.38
PNKP-230ENST00000638016 CAMLGP49069 296 aa12.66□□□□□ -0.38
PNKP-230ENST00000638016 HIST1H1AQ02539 215 aaPredicted RBP12.66□□□□□ -0.38
PNKP-230ENST00000638016 FAM222AQ5U5X8 452 aa12.66□□□□□ -0.38
PNKP-230ENST00000638016 ENKURQ8TC29 256 aa12.66□□□□□ -0.38
PNKP-230ENST00000638016 LYRM2Q9NU23 88 aaPredicted RBP12.66□□□□□ -0.38
PNKP-230ENST00000638016 WDR83OSQ9Y284 106 aa12.66□□□□□ -0.38
PNKP-230ENST00000638016 GOLT1BQ9Y3E0 138 aa12.66□□□□□ -0.38
PNKP-230ENST00000638016 RFNGQ9Y644 331 aa12.66□□□□□ -0.38
PNKP-230ENST00000638016 IGF2BP2-AS1Q96M15 143 aa12.65□□□□□ -0.38
PNKP-230ENST00000638016 UQCC1Q9NVA1 299 aa12.65□□□□□ -0.38
PNKP-230ENST00000638016 PTTG2Q9NZH5 202 aa12.65□□□□□ -0.38
PNKP-230ENST00000638016 DKK2Q9UBU2 259 aa12.65□□□□□ -0.38
PNKP-230ENST00000638016 LOC102723971A0A1B0GUV8 181 aa12.64□□□□□ -0.39
PNKP-230ENST00000638016 SMIM9A6NGZ8 99 aa12.64□□□□□ -0.39
PNKP-230ENST00000638016 ZNF705GA8MUZ8 300 aaPredicted RBP12.64□□□□□ -0.39
PNKP-230ENST00000638016 HBE1P02100 147 aa12.64□□□□□ -0.39
PNKP-230ENST00000638016 SULT1A1P50225 295 aa12.64□□□□□ -0.39
PNKP-230ENST00000638016 PSG3Q16557 428 aa12.64□□□□□ -0.39
PNKP-230ENST00000638016 VWC2Q2TAL6 325 aa12.64□□□□□ -0.39
PNKP-230ENST00000638016 OR8A1Q8NGG7 326 aa12.64□□□□□ -0.39
PNKP-230ENST00000638016 LRRC20Q8TCA0 184 aa12.64□□□□□ -0.39
PNKP-230ENST00000638016 YTHDF2Q9Y5A9 579 aaKnown RBP12.64□□□□□ -0.39
PNKP-230ENST00000638016 PRAC2D3DTV9 90 aa12.63□□□□□ -0.39
PNKP-230ENST00000638016 H3BQ15 152 aa12.63□□□□□ -0.39
PNKP-230ENST00000638016 DUSP14O95147 198 aaKnown RBP12.63□□□□□ -0.39
PNKP-230ENST00000638016 SPART-AS1P0CW21 52 aa12.63□□□□□ -0.39
PNKP-230ENST00000638016 PVALBP20472 110 aaPredicted RBP12.63□□□□□ -0.39
PNKP-230ENST00000638016 BAXQ07812 192 aa12.63□□□□□ -0.39
PNKP-230ENST00000638016 LRRC37A5PQ49AS3 106 aa12.63□□□□□ -0.39
PNKP-230ENST00000638016 PXDC1Q5TGL8 231 aa12.63□□□□□ -0.39
PNKP-230ENST00000638016 C10orf113Q5VZT2 155 aa12.63□□□□□ -0.39
PNKP-230ENST00000638016 RPUSD4Q96CM3 377 aaKnown RBP12.63□□□□□ -0.39
PNKP-230ENST00000638016 PARD6GQ9BYG4 376 aaPredicted RBP12.63□□□□□ -0.39
PNKP-230ENST00000638016 ZNF331Q9NQX6 463 aaPredicted RBP12.63□□□□□ -0.39
PNKP-230ENST00000638016 BOLA2-SMG1P6H3BVE0 249 aa12.62□□□□□ -0.39
PNKP-230ENST00000638016 TCTAP57738 103 aa12.62□□□□□ -0.39
PNKP-230ENST00000638016 RHOBP62745 196 aa12.62□□□□□ -0.39
PNKP-230ENST00000638016 KIR3DS1Q14943 382 aa12.62□□□□□ -0.39
PNKP-230ENST00000638016 RRN3P1Q2M238 152 aa12.62□□□□□ -0.39
PNKP-230ENST00000638016 TMEM208Q9BTX3 173 aa12.62□□□□□ -0.39
PNKP-230ENST00000638016 RNF126Q9BV68 326 aa12.62□□□□□ -0.39
PNKP-230ENST00000638016 GPN1Q9HCN4 374 aaPredicted RBP12.62□□□□□ -0.39
PNKP-230ENST00000638016 OR5AC2Q9NZP5 309 aa12.62□□□□□ -0.39
PNKP-230ENST00000638016 TMEM189A5PLL7 270 aa12.61□□□□□ -0.39
PNKP-230ENST00000638016 H0YIZ8 118 aa12.61□□□□□ -0.39
PNKP-230ENST00000638016 INSP01308 110 aa12.61□□□□□ -0.39
PNKP-230ENST00000638016 AMBPP02760 352 aa12.61□□□□□ -0.39
PNKP-230ENST00000638016 IGLC2P0DOY2 106 aa12.61□□□□□ -0.39
PNKP-230ENST00000638016 FGF7P21781 194 aa12.61□□□□□ -0.39
PNKP-230ENST00000638016 NHLH2Q02577 135 aa12.61□□□□□ -0.39
PNKP-230ENST00000638016 GCSAMLQ5JQS6 135 aa12.61□□□□□ -0.39
PNKP-230ENST00000638016 LCN15Q6UWW0 184 aa12.61□□□□□ -0.39
PNKP-230ENST00000638016 STX12Q86Y82 276 aa12.61□□□□□ -0.39
PNKP-230ENST00000638016 NIPSNAP3BQ9BS92 247 aa12.61□□□□□ -0.39
PNKP-230ENST00000638016 SLC39A9Q9NUM3 307 aa12.61□□□□□ -0.39
PNKP-230ENST00000638016 INMT-MINDY4F8WBC2 141 aa12.6□□□□□ -0.39
PNKP-230ENST00000638016 HTN3P15516 51 aa12.6□□□□□ -0.39
PNKP-230ENST00000638016 AZU1P20160 251 aa12.6□□□□□ -0.39
PNKP-230ENST00000638016 S100A11P31949 105 aa12.6□□□□□ -0.39
PNKP-230ENST00000638016 B2MP61769 119 aa12.6□□□□□ -0.39
PNKP-230ENST00000638016 Q6ZRG5 221 aa12.6□□□□□ -0.39
PNKP-230ENST00000638016 BPIFA4PQ86YQ2 179 aa12.6□□□□□ -0.39
PNKP-230ENST00000638016 THAP6Q8TBB0 222 aa12.6□□□□□ -0.39
PNKP-230ENST00000638016 DNAJC4Q9NNZ3 241 aa12.6□□□□□ -0.39
PNKP-230ENST00000638016 PXMP4Q9Y6I8 212 aa12.6□□□□□ -0.39
PNKP-230ENST00000638016 CXCL2P19875 107 aa12.59□□□□□ -0.39
PNKP-230ENST00000638016 RPL29P47914 159 aaKnown RBP12.59□□□□□ -0.39
PNKP-230ENST00000638016 RAB31Q13636 194 aa12.59□□□□□ -0.39
PNKP-230ENST00000638016 S100A7AQ86SG5 101 aa12.59□□□□□ -0.39
PNKP-230ENST00000638016 SAT2Q96F10 170 aaPredicted RBP12.59□□□□□ -0.39
PNKP-230ENST00000638016 ZNF586Q9NXT0 402 aa12.59□□□□□ -0.39
PNKP-230ENST00000638016 DNAH2Q9P225 4427 aa12.59□□□□□ -0.39
PNKP-230ENST00000638016 PLAC8L1A1L4L8 177 aa12.58□□□□□ -0.4
PNKP-230ENST00000638016 H2BFSP57053 126 aa12.58□□□□□ -0.4
PNKP-230ENST00000638016 HBG1P69891 147 aa12.58□□□□□ -0.4
PNKP-230ENST00000638016 HBG2P69892 147 aa12.58□□□□□ -0.4
PNKP-230ENST00000638016 FCN2Q15485 313 aa12.58□□□□□ -0.4
PNKP-230ENST00000638016 SLC50A1Q9BRV3 221 aa12.58□□□□□ -0.4
PNKP-230ENST00000638016 CLINT1Q14677 625 aa12.57□□□□□ -0.4
PNKP-230ENST00000638016 OR5C1Q8NGR4 320 aa12.57□□□□□ -0.4
PNKP-230ENST00000638016 OR1L4Q8NGR5 311 aa12.57□□□□□ -0.4
PNKP-230ENST00000638016 NDUFAF3Q9BU61 184 aa12.57□□□□□ -0.4
PNKP-230ENST00000638016 NPCDR1Q9BY65 106 aa12.57□□□□□ -0.4
PNKP-230ENST00000638016 PPP1R14DQ9NXH3 145 aa12.57□□□□□ -0.4
PNKP-230ENST00000638016 J3KRW8 73 aa12.56□□□□□ -0.4
PNKP-230ENST00000638016 PYYP10082 97 aa12.56□□□□□ -0.4
PNKP-230ENST00000638016 HTN1P15515 57 aa12.56□□□□□ -0.4
PNKP-230ENST00000638016 LINC01587Q99440 93 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms