RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 OXA1LQ15070 435 aa12.8□□□□□ -0.36
PNKP-225ENST00000636214 AMTNQ6UX39 209 aa12.8□□□□□ -0.36
PNKP-225ENST00000636214 C17orf77Q96MU5 243 aa12.8□□□□□ -0.36
PNKP-225ENST00000636214 C7orf66A4D0T2 115 aa12.79□□□□□ -0.36
PNKP-225ENST00000636214 AGPAT2O15120 278 aa12.79□□□□□ -0.36
PNKP-225ENST00000636214 CXCL2P19875 107 aa12.79□□□□□ -0.36
PNKP-225ENST00000636214 CAV2P51636 162 aa12.79□□□□□ -0.36
PNKP-225ENST00000636214 PSG3Q16557 428 aa12.79□□□□□ -0.36
PNKP-225ENST00000636214 LCN15Q6UWW0 184 aa12.79□□□□□ -0.36
PNKP-225ENST00000636214 LINC00305Q7Z4B0 112 aa12.79□□□□□ -0.36
PNKP-225ENST00000636214 ZNF431Q8TF32 576 aaPredicted RBP12.79□□□□□ -0.36
PNKP-225ENST00000636214 NUDT15Q9NV35 164 aa12.79□□□□□ -0.36
PNKP-225ENST00000636214 PLA2G10O15496 165 aa12.78□□□□□ -0.36
PNKP-225ENST00000636214 CXCL3P19876 107 aa12.78□□□□□ -0.36
PNKP-225ENST00000636214 Q6ZRG5 221 aa12.78□□□□□ -0.36
PNKP-225ENST00000636214 BPIFA4PQ86YQ2 179 aa12.78□□□□□ -0.36
PNKP-225ENST00000636214 BAP18Q8IXM2 172 aa12.78□□□□□ -0.36
PNKP-225ENST00000636214 OR8A1Q8NGG7 326 aa12.78□□□□□ -0.36
PNKP-225ENST00000636214 SLC50A1Q9BRV3 221 aa12.78□□□□□ -0.36
PNKP-225ENST00000636214 ZNF705GA8MUZ8 300 aaPredicted RBP12.77□□□□□ -0.37
PNKP-225ENST00000636214 S100A10P60903 97 aa12.77□□□□□ -0.37
PNKP-225ENST00000636214 C10orf113Q5VZT2 155 aa12.77□□□□□ -0.37
PNKP-225ENST00000636214 TMEM256Q8N2U0 113 aa12.77□□□□□ -0.37
PNKP-225ENST00000636214 C12orf45Q8N5I9 185 aaPredicted RBP12.77□□□□□ -0.37
PNKP-225ENST00000636214 RPUSD4Q96CM3 377 aaKnown RBP12.77□□□□□ -0.37
PNKP-225ENST00000636214 SEC22CQ9BRL7 303 aa12.77□□□□□ -0.37
PNKP-225ENST00000636214 CCDC32Q9BV29 185 aa12.77□□□□□ -0.37
PNKP-225ENST00000636214 TRAV12-2A0A075B6T6 113 aa12.76□□□□□ -0.37
PNKP-225ENST00000636214 FAM240BA0A1B0GVZ2 78 aa12.76□□□□□ -0.37
PNKP-225ENST00000636214 LYRM9A8MSI8 78 aa12.76□□□□□ -0.37
PNKP-225ENST00000636214 H2AFB2P0C5Z0 115 aa12.76□□□□□ -0.37
PNKP-225ENST00000636214 CAMLGP49069 296 aa12.76□□□□□ -0.37
PNKP-225ENST00000636214 ARL16Q0P5N6 197 aa12.76□□□□□ -0.37
PNKP-225ENST00000636214 MZT2BQ6NZ67 158 aa12.76□□□□□ -0.37
PNKP-225ENST00000636214 PATE2Q6UY27 113 aa12.76□□□□□ -0.37
PNKP-225ENST00000636214 LINC00336Q6ZUF6 198 aa12.76□□□□□ -0.37
PNKP-225ENST00000636214 C2orf50Q96LR7 162 aa12.76□□□□□ -0.37
PNKP-225ENST00000636214 LINC01587Q99440 93 aa12.76□□□□□ -0.37
PNKP-225ENST00000636214 STX12Q86Y82 276 aa12.75□□□□□ -0.37
PNKP-225ENST00000636214 MGST2Q99735 147 aa12.75□□□□□ -0.37
PNKP-225ENST00000636214 UQCC1Q9NVA1 299 aa12.75□□□□□ -0.37
PNKP-225ENST00000636214 PLA2G2EQ9NZK7 142 aa12.75□□□□□ -0.37
PNKP-225ENST00000636214 CRXO43186 299 aaPredicted RBP12.74□□□□□ -0.37
PNKP-225ENST00000636214 CST7O76096 145 aa12.74□□□□□ -0.37
PNKP-225ENST00000636214 TSPOP30536 169 aa12.74□□□□□ -0.37
PNKP-225ENST00000636214 HBG1P69891 147 aa12.74□□□□□ -0.37
PNKP-225ENST00000636214 HBG2P69892 147 aa12.74□□□□□ -0.37
PNKP-225ENST00000636214 OR1L4Q8NGR5 311 aa12.74□□□□□ -0.37
PNKP-225ENST00000636214 OR10J6PQ8NGY7 276 aa12.74□□□□□ -0.37
PNKP-225ENST00000636214 PXMP4Q9Y6I8 212 aa12.74□□□□□ -0.37
PNKP-225ENST00000636214 FAM24AA6NFZ4 105 aa12.73□□□□□ -0.37
PNKP-225ENST00000636214 M0R2N4 97 aa12.73□□□□□ -0.37
PNKP-225ENST00000636214 DEFB130BP0DP73 79 aa12.73□□□□□ -0.37
PNKP-225ENST00000636214 DEFB130AP0DP74 79 aa12.73□□□□□ -0.37
PNKP-225ENST00000636214 HTN1P15515 57 aa12.73□□□□□ -0.37
PNKP-225ENST00000636214 CDKN1BP46527 198 aa12.73□□□□□ -0.37
PNKP-225ENST00000636214 BAXQ07812 192 aa12.73□□□□□ -0.37
PNKP-225ENST00000636214 TMEM88Q6PEY1 159 aa12.73□□□□□ -0.37
PNKP-225ENST00000636214 NRARPQ7Z6K4 114 aa12.73□□□□□ -0.37
PNKP-225ENST00000636214 C15orf53Q8NAA6 179 aa12.73□□□□□ -0.37
PNKP-225ENST00000636214 PFDN5Q99471 154 aa12.73□□□□□ -0.37
PNKP-225ENST00000636214 DNAJC4Q9NNZ3 241 aa12.73□□□□□ -0.37
PNKP-225ENST00000636214 ZNF331Q9NQX6 463 aaPredicted RBP12.73□□□□□ -0.37
PNKP-225ENST00000636214 UBE2L5PA0A1B0GUS4 154 aa12.72□□□□□ -0.37
PNKP-225ENST00000636214 SNRPCP09234 159 aaKnown RBP12.72□□□□□ -0.37
PNKP-225ENST00000636214 S100A11P31949 105 aa12.72□□□□□ -0.37
PNKP-225ENST00000636214 SULT1A1P50225 295 aa12.72□□□□□ -0.37
PNKP-225ENST00000636214 TAS2R60P59551 318 aa12.72□□□□□ -0.37
PNKP-225ENST00000636214 S100ZQ8WXG8 99 aa12.72□□□□□ -0.37
PNKP-225ENST00000636214 C16orf74Q96GX8 76 aa12.72□□□□□ -0.37
PNKP-225ENST00000636214 LYRM2Q9NU23 88 aaPredicted RBP12.72□□□□□ -0.37
PNKP-225ENST00000636214 MRPS12O15235 138 aaKnown RBP12.71□□□□□ -0.37
PNKP-225ENST00000636214 OPCMLQ14982 345 aa12.71□□□□□ -0.37
PNKP-225ENST00000636214 MIC13Q5XKP0 118 aa12.71□□□□□ -0.37
PNKP-225ENST00000636214 TMEM37Q8WXS4 190 aa12.71□□□□□ -0.37
PNKP-225ENST00000636214 HECTD4Q9Y4D8 3996 aa12.7□□□□□ -0.38
PNKP-225ENST00000636214 H3BTX0 84 aa12.7□□□□□ -0.38
PNKP-225ENST00000636214 PRM2P04554 102 aa12.7□□□□□ -0.38
PNKP-225ENST00000636214 GUK1Q16774 197 aa12.7□□□□□ -0.38
PNKP-225ENST00000636214 RNF212Q495C1 297 aa12.7□□□□□ -0.38
PNKP-225ENST00000636214 ENKURQ8TC29 256 aa12.7□□□□□ -0.38
PNKP-225ENST00000636214 ATG101Q9BSB4 218 aa12.7□□□□□ -0.38
PNKP-225ENST00000636214 GPN1Q9HCN4 374 aaPredicted RBP12.7□□□□□ -0.38
PNKP-225ENST00000636214 WDR83OSQ9Y284 106 aa12.7□□□□□ -0.38
PNKP-225ENST00000636214 IGLV2-18A0A075B6J9 118 aa12.69□□□□□ -0.38
PNKP-225ENST00000636214 F5H768 121 aa12.69□□□□□ -0.38
PNKP-225ENST00000636214 H7BYZ3 331 aa12.69□□□□□ -0.38
PNKP-225ENST00000636214 ATP5G1P05496 136 aa12.69□□□□□ -0.38
PNKP-225ENST00000636214 PRB4P10163 310 aaPredicted RBP12.69□□□□□ -0.38
PNKP-225ENST00000636214 FGF7P21781 194 aa12.69□□□□□ -0.38
PNKP-225ENST00000636214 ATP5G3P48201 142 aa12.69□□□□□ -0.38
PNKP-225ENST00000636214 RAB32Q13637 225 aa12.69□□□□□ -0.38
PNKP-225ENST00000636214 ATP6V1FQ16864 119 aa12.69□□□□□ -0.38
PNKP-225ENST00000636214 LGALS9BQ3B8N2 356 aa12.69□□□□□ -0.38
PNKP-225ENST00000636214 SOHLH1Q5JUK2 328 aa12.69□□□□□ -0.38
PNKP-225ENST00000636214 ZNF493Q6ZR52 646 aa12.69□□□□□ -0.38
PNKP-225ENST00000636214 CCDC28AQ8IWP9 274 aa12.69□□□□□ -0.38
PNKP-225ENST00000636214 C20orf144Q9BQM9 153 aa12.69□□□□□ -0.38
PNKP-225ENST00000636214 TIMM8BQ9Y5J9 83 aaPredicted RBP12.69□□□□□ -0.38
PNKP-225ENST00000636214 SLC17A3O00476 420 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms