RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 ATP6V0E2Q8NHE4 81 aa9.96□□□□□ -0.81
LITAF-221ENST00000622633 FAM168AQ92567 244 aa9.96□□□□□ -0.81
LITAF-221ENST00000622633 RND1Q92730 232 aa9.96□□□□□ -0.81
LITAF-221ENST00000622633 TPPP3Q9BW30 176 aa9.96□□□□□ -0.81
LITAF-221ENST00000622633 COL25A1Q9BXS0 654 aaPredicted RBP9.96□□□□□ -0.81
LITAF-221ENST00000622633 CNOT1A5YKK6 2376 aaKnown RBP9.96□□□□□ -0.82
LITAF-221ENST00000622633 IGLL5B9A064 214 aa9.96□□□□□ -0.82
LITAF-221ENST00000622633 FNDC10F2Z333 226 aa9.96□□□□□ -0.82
LITAF-221ENST00000622633 NCR2O95944 276 aa9.96□□□□□ -0.82
LITAF-221ENST00000622633 MFAP2P55001 183 aa9.96□□□□□ -0.82
LITAF-221ENST00000622633 PRCDQ00LT1 54 aa9.96□□□□□ -0.82
LITAF-221ENST00000622633 POU2AF1Q16633 256 aa9.96□□□□□ -0.82
LITAF-221ENST00000622633 OR9G1Q8NH87 305 aa9.95□□□□□ -0.82
LITAF-221ENST00000622633 ZNF503Q96F45 646 aa9.95□□□□□ -0.82
LITAF-221ENST00000622633 RPUSD1Q9UJJ7 312 aaKnown RBP9.95□□□□□ -0.82
LITAF-221ENST00000622633 PLCE1Q9P212 2302 aa9.95□□□□□ -0.82
LITAF-221ENST00000622633 RBP4P02753 201 aa9.95□□□□□ -0.82
LITAF-221ENST00000622633 AREGP15514 252 aa9.95□□□□□ -0.82
LITAF-221ENST00000622633 IBA57Q5T440 356 aaKnown RBP9.95□□□□□ -0.82
LITAF-221ENST00000622633 FAM159AQ6UWV7 190 aa9.95□□□□□ -0.82
LITAF-221ENST00000622633 SLC25A48Q6ZT89 311 aaKnown RBP9.95□□□□□ -0.82
LITAF-221ENST00000622633 PIP4P2Q8N4L2 257 aa9.95□□□□□ -0.82
LITAF-221ENST00000622633 SLC25A10Q9UBX3 287 aaPredicted RBP9.95□□□□□ -0.82
LITAF-221ENST00000622633 C16orf97H3BN30 126 aa9.94□□□□□ -0.82
LITAF-221ENST00000622633 SLC25A5P05141 298 aaKnown RBP9.94□□□□□ -0.82
LITAF-221ENST00000622633 GCSHP23434 173 aa9.94□□□□□ -0.82
LITAF-221ENST00000622633 TCTAP57738 103 aa9.94□□□□□ -0.82
LITAF-221ENST00000622633 BCL6BQ8N143 479 aaPredicted RBP9.94□□□□□ -0.82
LITAF-221ENST00000622633 IGLV2-8P01709 118 aa9.94□□□□□ -0.82
LITAF-221ENST00000622633 SAA1P0DJI8 122 aaPredicted RBP9.94□□□□□ -0.82
LITAF-221ENST00000622633 FOXA3P55318 350 aaPredicted RBP9.94□□□□□ -0.82
LITAF-221ENST00000622633 AJUBAQ96IF1 538 aa9.94□□□□□ -0.82
LITAF-221ENST00000622633 SSBP3Q9BWW4 388 aaPredicted RBP9.94□□□□□ -0.82
LITAF-221ENST00000622633 TMEM167BQ9NRX6 74 aa9.94□□□□□ -0.82
LITAF-221ENST00000622633 ONECUT1Q9UBC0 465 aa9.94□□□□□ -0.82
LITAF-221ENST00000622633 TRAV5A0A0B4J249 113 aa9.93□□□□□ -0.82
LITAF-221ENST00000622633 KLK10O43240 276 aa9.93□□□□□ -0.82
LITAF-221ENST00000622633 RNASE2P10153 161 aaKnown RBP9.93□□□□□ -0.82
LITAF-221ENST00000622633 SMCPP49901 116 aaPredicted RBP9.93□□□□□ -0.82
LITAF-221ENST00000622633 CCL8P80075 99 aa9.93□□□□□ -0.82
LITAF-221ENST00000622633 TMEM78Q5T7P6 136 aa9.93□□□□□ -0.82
LITAF-221ENST00000622633 PCP2Q8IVA1 136 aa9.93□□□□□ -0.82
LITAF-221ENST00000622633 ZCCHC24Q8N2G6 241 aaKnown RBP9.93□□□□□ -0.82
LITAF-221ENST00000622633 OR5AN1Q8NGI8 311 aa9.93□□□□□ -0.82
LITAF-221ENST00000622633 LINC00574Q9H8X3 128 aa9.93□□□□□ -0.82
LITAF-221ENST00000622633 F11RQ9Y624 299 aaKnown RBP9.93□□□□□ -0.82
LITAF-221ENST00000622633 DSCAML1Q8TD84 2053 aa9.93□□□□□ -0.82
LITAF-221ENST00000622633 CHEK1O14757 476 aa9.93□□□□□ -0.82
LITAF-221ENST00000622633 CD40P25942 277 aa9.93□□□□□ -0.82
LITAF-221ENST00000622633 MEIG1Q5JSS6 88 aa9.93□□□□□ -0.82
LITAF-221ENST00000622633 ASPHD1Q5U4P2 390 aa9.93□□□□□ -0.82
LITAF-221ENST00000622633 MRPL20Q9BYC9 149 aaKnown RBP9.93□□□□□ -0.82
LITAF-221ENST00000622633 OTOGLQ3ZCN5 2332 aa9.92□□□□□ -0.82
LITAF-221ENST00000622633 LAMA5O15230 3695 aa9.92□□□□□ -0.82
LITAF-221ENST00000622633 GGTLC3B5MD39 225 aa9.92□□□□□ -0.82
LITAF-221ENST00000622633 K7EM74 188 aa9.92□□□□□ -0.82
LITAF-221ENST00000622633 TM4SF5O14894 197 aa9.92□□□□□ -0.82
LITAF-221ENST00000622633 CD24P25063 80 aa9.92□□□□□ -0.82
LITAF-221ENST00000622633 C3orf36Q3SXR2 165 aa9.92□□□□□ -0.82
LITAF-221ENST00000622633 C2orf83Q53S99 150 aa9.92□□□□□ -0.82
LITAF-221ENST00000622633 NUP35Q8NFH5 326 aa9.92□□□□□ -0.82
LITAF-221ENST00000622633 MAP1BP46821 2468 aaKnown RBP9.92□□□□□ -0.82
LITAF-221ENST00000622633 E7EUB6 86 aa9.92□□□□□ -0.82
LITAF-221ENST00000622633 FCN3O75636 299 aa9.92□□□□□ -0.82
LITAF-221ENST00000622633 CCL3L1P16619 93 aa9.92□□□□□ -0.82
LITAF-221ENST00000622633 ATP5IP56385 69 aaPredicted RBP9.92□□□□□ -0.82
LITAF-221ENST00000622633 MORN5Q5VZ52 161 aa9.92□□□□□ -0.82
LITAF-221ENST00000622633 CARD19Q96LW7 228 aa9.92□□□□□ -0.82
LITAF-221ENST00000622633 MAP1LC3AQ9H492 121 aa9.92□□□□□ -0.82
LITAF-221ENST00000622633 NHP2Q9NX24 153 aaKnown RBP9.92□□□□□ -0.82
LITAF-221ENST00000622633 RAI1Q7Z5J4 1906 aaPredicted RBP9.92□□□□□ -0.82
LITAF-221ENST00000622633 CAMPP49913 170 aa9.91□□□□□ -0.82
LITAF-221ENST00000622633 NHLRC2Q8NBF2 726 aa9.91□□□□□ -0.82
LITAF-221ENST00000622633 DNAJC30Q96LL9 226 aa9.91□□□□□ -0.82
LITAF-221ENST00000622633 SPANXA1Q9NS26 97 aa9.91□□□□□ -0.82
LITAF-221ENST00000622633 ROS1P08922 2347 aa9.91□□□□□ -0.82
LITAF-221ENST00000622633 TTC28Q96AY4 2481 aa9.91□□□□□ -0.82
LITAF-221ENST00000622633 TMEM8BA6NDV4 472 aa9.91□□□□□ -0.82
LITAF-221ENST00000622633 IGHV3-48P01763 117 aa9.91□□□□□ -0.82
LITAF-221ENST00000622633 ZNF138P52744 262 aa9.91□□□□□ -0.82
LITAF-221ENST00000622633 CD69Q07108 199 aa9.91□□□□□ -0.82
LITAF-221ENST00000622633 TEX36Q5VZQ5 186 aa9.91□□□□□ -0.82
LITAF-221ENST00000622633 ZNF833PQ6ZTB9 187 aa9.91□□□□□ -0.82
LITAF-221ENST00000622633 OR1L8Q8NGR8 309 aa9.91□□□□□ -0.82
LITAF-221ENST00000622633 SLC25A33Q9BSK2 321 aa9.91□□□□□ -0.82
LITAF-221ENST00000622633 ZNF747Q9BV97 191 aa9.91□□□□□ -0.82
LITAF-221ENST00000622633 TMEM126AQ9H061 195 aa9.91□□□□□ -0.82
LITAF-221ENST00000622633 CEP250Q9BV73 2442 aa9.91□□□□□ -0.82
LITAF-221ENST00000622633 DYSFO75923 2080 aa9.9□□□□□ -0.82
LITAF-221ENST00000622633 TANC2Q9HCD6 1990 aa9.9□□□□□ -0.82
LITAF-221ENST00000622633 MGAQ8IWI9 3026 aa9.9□□□□□ -0.82
LITAF-221ENST00000622633 DMXL1Q9Y485 3027 aa9.9□□□□□ -0.82
LITAF-221ENST00000622633 ARFGEF3Q5TH69 2177 aa9.9□□□□□ -0.82
LITAF-221ENST00000622633 K7EMI3 77 aa9.9□□□□□ -0.82
LITAF-221ENST00000622633 C8orf88P0DMB2 117 aa9.9□□□□□ -0.82
LITAF-221ENST00000622633 IFITM1P13164 125 aa9.9□□□□□ -0.82
LITAF-221ENST00000622633 Q6ZS92 163 aa9.9□□□□□ -0.82
LITAF-221ENST00000622633 NDUFA4L2Q9NRX3 87 aa9.9□□□□□ -0.82
LITAF-221ENST00000622633 SMG1Q96Q15 3661 aaKnown RBP9.9□□□□□ -0.82
LITAF-221ENST00000622633 PRRG2O14669 202 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms