RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 AKR1C3P42330 323 aa12.11□□□□□ -0.47
CBWD3-216ENST00000621396 OR1N2Q8NGR9 330 aa12.11□□□□□ -0.47
CBWD3-216ENST00000621396 RAX2Q96IS3 184 aa12.11□□□□□ -0.47
CBWD3-216ENST00000621396 TMEM213A2RRL7 107 aa12.1□□□□□ -0.47
CBWD3-216ENST00000621396 ZNF785A8K8V0 405 aa12.1□□□□□ -0.47
CBWD3-216ENST00000621396 DPF1Q92782 380 aa12.1□□□□□ -0.47
CBWD3-216ENST00000621396 DLX4Q92988 240 aaPredicted RBP12.1□□□□□ -0.47
CBWD3-216ENST00000621396 ASCL2Q99929 193 aa12.1□□□□□ -0.47
CBWD3-216ENST00000621396 SMDT1Q9H4I9 107 aa12.1□□□□□ -0.47
CBWD3-216ENST00000621396 U3KQE9 123 aa12.1□□□□□ -0.47
CBWD3-216ENST00000621396 TRAV34A0A0B4J273 112 aa12.1□□□□□ -0.47
CBWD3-216ENST00000621396 ZNF727A8MUV8 499 aa12.1□□□□□ -0.47
CBWD3-216ENST00000621396 RNF182Q8N6D2 247 aa12.1□□□□□ -0.47
CBWD3-216ENST00000621396 SMIM7Q9BQ49 75 aa12.1□□□□□ -0.47
CBWD3-216ENST00000621396 LINC01619G3V211 115 aa12.09□□□□□ -0.47
CBWD3-216ENST00000621396 PDE6DO43924 150 aa12.09□□□□□ -0.47
CBWD3-216ENST00000621396 SLC25A5P05141 298 aaKnown RBP12.09□□□□□ -0.47
CBWD3-216ENST00000621396 C10orf91Q5T1B1 145 aa12.09□□□□□ -0.47
CBWD3-216ENST00000621396 S100A7AQ86SG5 101 aa12.09□□□□□ -0.47
CBWD3-216ENST00000621396 TRBV20OR9-2A0A075B6H5 130 aa12.09□□□□□ -0.47
CBWD3-216ENST00000621396 IGHV7-4-1A0A0J9YVY3 117 aa12.09□□□□□ -0.47
CBWD3-216ENST00000621396 ATF4P18848 351 aaPredicted RBP12.09□□□□□ -0.47
CBWD3-216ENST00000621396 MYCNOSP40205 109 aa12.09□□□□□ -0.47
CBWD3-216ENST00000621396 SIGLEC15Q6ZMC9 328 aa12.09□□□□□ -0.47
CBWD3-216ENST00000621396 GBGT1Q8N5D6 347 aa12.09□□□□□ -0.47
CBWD3-216ENST00000621396 ZNF705FA8MVS1 300 aaPredicted RBP12.08□□□□□ -0.48
CBWD3-216ENST00000621396 CHEK1O14757 476 aa12.08□□□□□ -0.48
CBWD3-216ENST00000621396 KLF5Q13887 457 aaPredicted RBP12.08□□□□□ -0.48
CBWD3-216ENST00000621396 C16orf54Q6UWD8 224 aa12.08□□□□□ -0.48
CBWD3-216ENST00000621396 GLMPQ8WWB7 406 aa12.08□□□□□ -0.48
CBWD3-216ENST00000621396 CARHSP1Q9Y2V2 147 aaKnown RBP12.08□□□□□ -0.48
CBWD3-216ENST00000621396 TSSC4Q9Y5U2 329 aaPredicted RBP12.08□□□□□ -0.48
CBWD3-216ENST00000621396 SORL1Q92673 2214 aa12.08□□□□□ -0.48
CBWD3-216ENST00000621396 TRAV8-1A0A0A6YYK1 113 aa12.08□□□□□ -0.48
CBWD3-216ENST00000621396 TMEM250H0YL14 139 aa12.08□□□□□ -0.48
CBWD3-216ENST00000621396 SMPXQ9UHP9 88 aa12.08□□□□□ -0.48
CBWD3-216ENST00000621396 M0R036 132 aa12.07□□□□□ -0.48
CBWD3-216ENST00000621396 TAGLN2P37802 199 aaKnown RBP12.07□□□□□ -0.48
CBWD3-216ENST00000621396 RPL35P42766 123 aaKnown RBP12.07□□□□□ -0.48
CBWD3-216ENST00000621396 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.07□□□□□ -0.48
CBWD3-216ENST00000621396 CCL24O00175 119 aa12.07□□□□□ -0.48
CBWD3-216ENST00000621396 ADAMTSL5Q6ZMM2 481 aa12.07□□□□□ -0.48
CBWD3-216ENST00000621396 NHLRC2Q8NBF2 726 aa12.07□□□□□ -0.48
CBWD3-216ENST00000621396 ADARB2-AS1A8MUL3 147 aa12.06□□□□□ -0.48
CBWD3-216ENST00000621396 CBLN1P23435 193 aa12.06□□□□□ -0.48
CBWD3-216ENST00000621396 GALR1P47211 349 aa12.06□□□□□ -0.48
CBWD3-216ENST00000621396 TFPI2P48307 235 aa12.06□□□□□ -0.48
CBWD3-216ENST00000621396 WFDC3Q8IUB2 231 aa12.06□□□□□ -0.48
CBWD3-216ENST00000621396 NIPSNAP3BQ9BS92 247 aa12.06□□□□□ -0.48
CBWD3-216ENST00000621396 EPDR1Q9UM22 224 aa12.06□□□□□ -0.48
CBWD3-216ENST00000621396 UFC1Q9Y3C8 167 aa12.06□□□□□ -0.48
CBWD3-216ENST00000621396 C2orf70A6NJV1 201 aa12.06□□□□□ -0.48
CBWD3-216ENST00000621396 FOLR2P14207 255 aa12.06□□□□□ -0.48
CBWD3-216ENST00000621396 DEFB1P60022 68 aa12.06□□□□□ -0.48
CBWD3-216ENST00000621396 SVBPQ8N300 66 aa12.06□□□□□ -0.48
CBWD3-216ENST00000621396 F6UZH7 168 aa12.05□□□□□ -0.48
CBWD3-216ENST00000621396 ISLRO14498 428 aa12.05□□□□□ -0.48
CBWD3-216ENST00000621396 AWAT1Q58HT5 328 aa12.05□□□□□ -0.48
CBWD3-216ENST00000621396 C1orf194Q5T5A4 169 aa12.05□□□□□ -0.48
CBWD3-216ENST00000621396 C1QL4Q86Z23 238 aa12.05□□□□□ -0.48
CBWD3-216ENST00000621396 C2CD4CQ8TF44 421 aa12.05□□□□□ -0.48
CBWD3-216ENST00000621396 STAB1Q9NY15 2570 aa12.05□□□□□ -0.48
CBWD3-216ENST00000621396 NOTCH3Q9UM47 2321 aa12.05□□□□□ -0.48
CBWD3-216ENST00000621396 PEX7O00628 323 aa12.05□□□□□ -0.48
CBWD3-216ENST00000621396 GOLT1AQ6ZVE7 132 aa12.05□□□□□ -0.48
CBWD3-216ENST00000621396 PRIMA1Q86XR5 153 aa12.05□□□□□ -0.48
CBWD3-216ENST00000621396 CMTM2Q8TAZ6 248 aa12.05□□□□□ -0.48
CBWD3-216ENST00000621396 ZNF331Q9NQX6 463 aaPredicted RBP12.05□□□□□ -0.48
CBWD3-216ENST00000621396 MLXQ9UH92 298 aa12.05□□□□□ -0.48
CBWD3-216ENST00000621396 ARL2-SNX15V9GYD0 113 aa12.05□□□□□ -0.48
CBWD3-216ENST00000621396 HELTA6NFD8 242 aa12.04□□□□□ -0.48
CBWD3-216ENST00000621396 K7EMT4 169 aa12.04□□□□□ -0.48
CBWD3-216ENST00000621396 TCF24Q7RTU0 167 aa12.04□□□□□ -0.48
CBWD3-216ENST00000621396 CLRN3Q8NCR9 226 aa12.04□□□□□ -0.48
CBWD3-216ENST00000621396 OR9G4Q8NGQ1 327 aa12.04□□□□□ -0.48
CBWD3-216ENST00000621396 TXNDC17Q9BRA2 123 aa12.04□□□□□ -0.48
CBWD3-216ENST00000621396 OTORQ9NRC9 128 aa12.04□□□□□ -0.48
CBWD3-216ENST00000621396 A0A1W2PS18 150 aa12.03□□□□□ -0.48
CBWD3-216ENST00000621396 TCRAP04437 139 aa12.03□□□□□ -0.48
CBWD3-216ENST00000621396 ADIRFQ15847 76 aa12.03□□□□□ -0.48
CBWD3-216ENST00000621396 TMEM88Q6PEY1 159 aa12.03□□□□□ -0.48
CBWD3-216ENST00000621396 WFDC12Q8WWY7 111 aa12.03□□□□□ -0.48
CBWD3-216ENST00000621396 TRAV8-2A0A0B4J237 113 aa12.03□□□□□ -0.48
CBWD3-216ENST00000621396 A8MWP6 167 aa12.03□□□□□ -0.48
CBWD3-216ENST00000621396 PRAC2D3DTV9 90 aa12.03□□□□□ -0.48
CBWD3-216ENST00000621396 LGALS9O00182 355 aa12.03□□□□□ -0.48
CBWD3-216ENST00000621396 S100A7P31151 101 aa12.03□□□□□ -0.48
CBWD3-216ENST00000621396 REC114Q7Z4M0 266 aa12.03□□□□□ -0.48
CBWD3-216ENST00000621396 C5orf17Q8NAS9 161 aa12.03□□□□□ -0.48
CBWD3-216ENST00000621396 C11orf52Q96A22 123 aa12.03□□□□□ -0.48
CBWD3-216ENST00000621396 NKX6-2Q9C056 277 aaPredicted RBP12.03□□□□□ -0.48
CBWD3-216ENST00000621396 AAMDCQ9H7C9 122 aa12.03□□□□□ -0.48
CBWD3-216ENST00000621396 COL6A5A8TX70 2615 aa12.03□□□□□ -0.48
CBWD3-216ENST00000621396 IGKV2-40A0A087WW87 121 aaPredicted RBP12.02□□□□□ -0.48
CBWD3-216ENST00000621396 IGKV2D-40P01614 121 aaPredicted RBP12.02□□□□□ -0.48
CBWD3-216ENST00000621396 ZNF705DP0CH99 300 aaPredicted RBP12.02□□□□□ -0.48
CBWD3-216ENST00000621396 ZNF705BP0CI00 300 aaPredicted RBP12.02□□□□□ -0.48
CBWD3-216ENST00000621396 TMEM241Q24JQ0 296 aa12.02□□□□□ -0.48
CBWD3-216ENST00000621396 KRTAP24-1Q3LI83 254 aa12.02□□□□□ -0.48
CBWD3-216ENST00000621396 GRAMD2BQ96HH9 432 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms