RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 ZNF90Q03938 601 aa13.14□□□□□ -0.31
TRAPPC3-209ENST00000616395 SOHLH1Q5JUK2 328 aa13.14□□□□□ -0.31
TRAPPC3-209ENST00000616395 IGKV1D-37A0A075B6S9 117 aa13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 TRBV9A0A0B4J1U6 114 aa13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 OR11H12B2RN74 326 aa13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 HMGB3O15347 200 aaKnown RBP13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 PDE6DO43924 150 aa13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 NDUFB8O95169 186 aa13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 SNAPINO95295 136 aa13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 TRBV12-3P01733 135 aa13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 LYZP61626 148 aa13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 CCL20P78556 96 aa13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 MEF2BQ02080 365 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 C15orf32Q32M92 178 aa13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 RXFP4Q8TDU9 374 aa13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 TMEM190Q8WZ59 177 aa13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 UHRF2Q96PU4 802 aa13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 DMRT1Q9Y5R6 373 aa13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 ZNF785A8K8V0 405 aa13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 ARL14EPLP0DKL9 152 aa13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 GATA2P23769 480 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 GCHFRP30047 84 aa13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 RELQ04864 619 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 TIGITQ495A1 244 aa13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 GCSAMLQ5JQS6 135 aa13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 OR2K2Q8NGT1 345 aa13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 LINC00052Q96N35 136 aa13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 NKX6-2Q9C056 277 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 SEPSECSQ9HD40 501 aaKnown RBP13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 CARHSP1Q9Y2V2 147 aaKnown RBP13.13□□□□□ -0.31
TRAPPC3-209ENST00000616395 VPS13DQ5THJ4 4388 aa13.12□□□□□ -0.31
TRAPPC3-209ENST00000616395 F6UZH7 168 aa13.12□□□□□ -0.31
TRAPPC3-209ENST00000616395 PSG1P11464 419 aa13.12□□□□□ -0.31
TRAPPC3-209ENST00000616395 ICAM4Q14773 271 aa13.12□□□□□ -0.31
TRAPPC3-209ENST00000616395 CD300EQ496F6 205 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC3-209ENST00000616395 CST9LP1Q5W188 147 aa13.12□□□□□ -0.31
TRAPPC3-209ENST00000616395 SSX7Q7RTT5 188 aa13.12□□□□□ -0.31
TRAPPC3-209ENST00000616395 LINC00305Q7Z4B0 112 aa13.12□□□□□ -0.31
TRAPPC3-209ENST00000616395 MRPL36Q9P0J6 103 aaKnown RBP13.12□□□□□ -0.31
TRAPPC3-209ENST00000616395 DOK5Q9P104 306 aa13.12□□□□□ -0.31
TRAPPC3-209ENST00000616395 TMEM250H0YL14 139 aa13.11□□□□□ -0.31
TRAPPC3-209ENST00000616395 BMPR1BO00238 502 aa13.11□□□□□ -0.31
TRAPPC3-209ENST00000616395 MED14OSP0DP75 135 aa13.11□□□□□ -0.31
TRAPPC3-209ENST00000616395 FAM74A3Q4VXF1 159 aa13.11□□□□□ -0.31
TRAPPC3-209ENST00000616395 ZNF600Q6ZNG1 722 aa13.11□□□□□ -0.31
TRAPPC3-209ENST00000616395 MIR17HGQ75NE6 70 aa13.11□□□□□ -0.31
TRAPPC3-209ENST00000616395 S4R3C0 116 aa13.11□□□□□ -0.31
TRAPPC3-209ENST00000616395 PAGE4O60829 102 aa13.1□□□□□ -0.31
TRAPPC3-209ENST00000616395 CEBPGP53567 150 aa13.1□□□□□ -0.31
TRAPPC3-209ENST00000616395 UBE2L3P68036 154 aaKnown RBP13.1□□□□□ -0.31
TRAPPC3-209ENST00000616395 SRSF3P84103 164 aaKnown RBP13.1□□□□□ -0.31
TRAPPC3-209ENST00000616395 ZNF502Q8TBZ5 544 aa13.1□□□□□ -0.31
TRAPPC3-209ENST00000616395 TMEM37Q8WXS4 190 aa13.1□□□□□ -0.31
TRAPPC3-209ENST00000616395 RNF125Q96EQ8 232 aa13.1□□□□□ -0.31
TRAPPC3-209ENST00000616395 RARRES2Q99969 163 aa13.1□□□□□ -0.31
TRAPPC3-209ENST00000616395 PAXXQ9BUH6 204 aa13.1□□□□□ -0.31
TRAPPC3-209ENST00000616395 OR51M1Q9H341 326 aa13.1□□□□□ -0.31
TRAPPC3-209ENST00000616395 PEF1Q9UBV8 284 aaKnown RBP13.1□□□□□ -0.31
TRAPPC3-209ENST00000616395 C11orf94C9JXX5 98 aa13.09□□□□□ -0.31
TRAPPC3-209ENST00000616395 OR2C1O95371 312 aa13.09□□□□□ -0.31
TRAPPC3-209ENST00000616395 IGKV1-17P01599 117 aa13.09□□□□□ -0.31
TRAPPC3-209ENST00000616395 IL4P05112 153 aa13.09□□□□□ -0.31
TRAPPC3-209ENST00000616395 SRP19P09132 144 aaKnown RBP13.09□□□□□ -0.31
TRAPPC3-209ENST00000616395 C10orf91Q5T1B1 145 aa13.09□□□□□ -0.31
TRAPPC3-209ENST00000616395 NIPSNAP3BQ9BS92 247 aa13.09□□□□□ -0.31
TRAPPC3-209ENST00000616395 KRTAP4-5Q9BYR2 181 aa13.09□□□□□ -0.31
TRAPPC3-209ENST00000616395 OR2T8A6NH00 312 aa13.08□□□□□ -0.32
TRAPPC3-209ENST00000616395 IGHV3-23P01764 117 aa13.08□□□□□ -0.32
TRAPPC3-209ENST00000616395 GUCA2BQ16661 112 aa13.08□□□□□ -0.32
TRAPPC3-209ENST00000616395 RPEL1Q2QD12 228 aa13.08□□□□□ -0.32
TRAPPC3-209ENST00000616395 ZNF343Q6P1L6 599 aa13.08□□□□□ -0.32
TRAPPC3-209ENST00000616395 TMPRSS5Q9H3S3 457 aa13.08□□□□□ -0.32
TRAPPC3-209ENST00000616395 PEMTQ9UBM1 199 aa13.08□□□□□ -0.32
TRAPPC3-209ENST00000616395 RABAC1Q9UI14 185 aa13.08□□□□□ -0.32
TRAPPC3-209ENST00000616395 TGOLN2O43493 480 aa13.07□□□□□ -0.32
TRAPPC3-209ENST00000616395 CLEC3BP05452 202 aa13.07□□□□□ -0.32
TRAPPC3-209ENST00000616395 GPR183P32249 361 aa13.07□□□□□ -0.32
TRAPPC3-209ENST00000616395 SPATA31B1PQ5VZV4 182 aa13.07□□□□□ -0.32
TRAPPC3-209ENST00000616395 CLEC19AQ6UXS0 136 aa13.07□□□□□ -0.32
TRAPPC3-209ENST00000616395 BPIFA4PQ86YQ2 179 aa13.07□□□□□ -0.32
TRAPPC3-209ENST00000616395 RPUSD4Q96CM3 377 aaKnown RBP13.07□□□□□ -0.32
TRAPPC3-209ENST00000616395 TCEAL7Q9BRU2 100 aa13.07□□□□□ -0.32
TRAPPC3-209ENST00000616395 SCRT1Q9BWW7 348 aa13.07□□□□□ -0.32
TRAPPC3-209ENST00000616395 A0A1W2PRE2 83 aa13.06□□□□□ -0.32
TRAPPC3-209ENST00000616395 PPP5D1E7EU14 171 aa13.06□□□□□ -0.32
TRAPPC3-209ENST00000616395 UBE2G2P60604 165 aa13.06□□□□□ -0.32
TRAPPC3-209ENST00000616395 PNRC1Q12796 327 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC3-209ENST00000616395 DEFB114Q30KQ6 69 aa13.06□□□□□ -0.32
TRAPPC3-209ENST00000616395 DYNLRB2Q8TF09 96 aa13.06□□□□□ -0.32
TRAPPC3-209ENST00000616395 PHLDA1Q8WV24 401 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC3-209ENST00000616395 SLC25A39Q9BZJ4 359 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC3-209ENST00000616395 MRPL27Q9P0M9 148 aaKnown RBP13.06□□□□□ -0.32
TRAPPC3-209ENST00000616395 TMEM14CQ9P0S9 112 aa13.06□□□□□ -0.32
TRAPPC3-209ENST00000616395 PRELID1Q9Y255 219 aa13.06□□□□□ -0.32
TRAPPC3-209ENST00000616395 PKHD1P08F94 4074 aa13.05□□□□□ -0.32
TRAPPC3-209ENST00000616395 CTSGP08311 255 aa13.05□□□□□ -0.32
TRAPPC3-209ENST00000616395 PATE2Q6UY27 113 aa13.05□□□□□ -0.32
TRAPPC3-209ENST00000616395 WFDC3Q8IUB2 231 aa13.05□□□□□ -0.32
TRAPPC3-209ENST00000616395 CYB561D1Q8N8Q1 229 aa13.05□□□□□ -0.32
TRAPPC3-209ENST00000616395 GPR82Q96P67 336 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms